Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0168600 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.1e-65 253.1 124 100.0
Rhsim11G0040900 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.1e-60 236.5 127 93.7
Rhsim11G0041100 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.4e-55 219.5 124 86.3
vmacro00116 Vaccinium macrocarpon HOM05D008628 ORTHO05D010443 1.0e-45 186.8 117 72.6
Rhsim11G0041000 Rhododendron simsii HOM05D008628 ORTHO05D010443 4.6e-43 177.9 114 77.2
Rhsim10G0168500 Rhododendron simsii HOM05D008628 ORTHO05D010443 2.9e-29 132.1 70 85.7
Rhsim10G0168400 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.5e-28 129.8 68 86.8
THA.LOC109116389 Tarenaya hassleriana HOM05D008628 ORTHO05D010443 8.2e-24 114.0 96 56.2
CARHR176870 Cardamine hirsuta HOM05D008628 ORTHO05D010443 9.1e-23 110.5 93 54.8
C07p28310 Brassica napus HOM05D008628 ORTHO05D010443 1.6e-22 109.8 93 50.5
BolC7t43371H Brassica oleracea HOM05D008628 ORTHO05D010443 1.6e-22 109.8 93 50.5
A06p46700 Brassica napus HOM05D008628 ORTHO05D010443 1.7e-21 106.3 93 50.5
Thhalv10001147m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.7e-21 106.3 97 49.5
Sp2g10210 Schrenkiella parvula HOM05D008628 ORTHO05D010443 1.7e-21 106.3 97 50.5
Thhalv10001145m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.2e-21 105.9 97 52.6
Carub.0008s0288 Capsella rubella HOM05D008628 ORTHO05D010443 1.2e-19 100.1 93 48.4
Sp2g10200 Schrenkiella parvula HOM05D008628 ORTHO05D010443 1.6e-19 99.8 94 48.9
Thhalv10011104m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.1e-19 99.4 93 52.7
Thhalv10011141m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.0e-18 97.1 93 49.5
Thhalv10010855m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.8e-18 96.3 93 48.4
AL8G13560 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 3.0e-18 95.5 92 45.7
BraA06t27542Z Brassica rapa HOM05D008628 ORTHO05D010443 5.2e-18 94.7 93 46.2
Thhalv10011057m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.2e-17 93.6 94 48.9
AL5G30140 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 1.5e-17 93.2 93 49.5
Carub.0005s1637 Capsella rubella HOM05D008628 ORTHO05D010443 2.0e-17 92.8 93 50.5
AT3G50020 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 7.5e-17 90.9 93 45.2
Thhalv10011101m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 9.8e-17 90.5 94 45.7
BcaC06g31563 Brassica carinata HOM05D008628 ORTHO05D010443 1.8e-15 86.3 68 55.9
Thhalv10011083m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.4e-15 85.9 94 46.8
BcaC06g34456 Brassica carinata HOM05D008628 ORTHO05D010443 3.1e-15 85.5 68 54.4
Thhalv10011021m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.7e-14 82.4 93 45.2
AL5G30120 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 1.7e-13 79.7 76 52.6
AT5G45277 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 3.2e-12 75.5 68 50.0
Sp5g12080 Schrenkiella parvula HOM05D002032 ORTHO05D002247 2.3e-10 69.3 68 45.6
SpUn1030_0010 Schrenkiella parvula HOM05D008628 ORTHO05D010443 2.0e-09 66.2 68 50.0
A06p47800 Brassica napus HOM05D001004 ORTHO05D000653 6.3e-08 61.2 70 50.0
TWI34G0474 Tripterygium wilfordii HOM05D008628 ORTHO05D010443 6.3e-08 61.2 70 45.7
Nn4g26614 Nelumbo nucifera HOM05D008628 ORTHO05D010443 1.4e-07 60.1 87 37.9
Oeu030752.1 Olea europaea HOM05D008628 ORTHO05D000653 3.1e-07 58.9 68 42.6
Thhalv10003303m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 4.1e-07 58.5 77 45.5
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 4.1e-07 58.5 68 42.6
BolC7t43147H Brassica oleracea HOM05D001004 ORTHO05D000653 5.4e-07 58.2 68 48.5
BraA06t27650Z Brassica rapa HOM05D001004 ORTHO05D000653 5.4e-07 58.2 68 48.5
THA.LOC104805628 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 1.2e-06 57.0 71 46.5
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 2.0e-06 56.2 81 39.5
BcaC06g31688 Brassica carinata HOM05D001004 ORTHO05D000653 3.5e-06 55.5 68 47.1
Migut.C00658 Erythranthe guttata HOM05D001004 ORTHO05D000653 4.5e-06 55.1 90 36.7
Peaxi162Scf00690g00221 Petunia axillaris HOM05D009680 ORTHO05D010443 4.5e-06 55.1 88 38.6
Migut.L00816 Erythranthe guttata HOM05D001004 ORTHO05D000653 7.7e-06 54.3 88 38.6


User provided reference genes

Program Settings