Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0168500 Rhododendron simsii HOM05D008628 ORTHO05D010443 5.1e-53 210.7 98 100.0
Rhsim11G0041000 Rhododendron simsii HOM05D008628 ORTHO05D010443 9.1e-34 146.7 70 95.7
Rhsim10G0168400 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.6e-30 136.0 68 91.2
Rhsim11G0041100 Rhododendron simsii HOM05D008628 ORTHO05D010443 3.6e-30 134.8 70 85.7
Rhsim11G0040900 Rhododendron simsii HOM05D008628 ORTHO05D010443 4.7e-30 134.4 70 87.1
Rhsim10G0168600 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.8e-29 132.5 70 85.7
vmacro00116 Vaccinium macrocarpon HOM05D008628 ORTHO05D010443 1.8e-26 122.5 70 74.3
THA.LOC109116389 Tarenaya hassleriana HOM05D008628 ORTHO05D010443 1.3e-16 89.7 71 60.6
CARHR176870 Cardamine hirsuta HOM05D008628 ORTHO05D010443 1.1e-15 86.7 70 58.6
Sp2g10210 Schrenkiella parvula HOM05D008628 ORTHO05D010443 3.6e-14 81.6 71 53.5
Carub.0008s0288 Capsella rubella HOM05D008628 ORTHO05D010443 6.1e-14 80.9 70 52.9
Sp2g10200 Schrenkiella parvula HOM05D008628 ORTHO05D010443 3.0e-13 78.6 71 52.1
AL8G13560 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 4.0e-13 78.2 66 51.5
BcaC06g31563 Brassica carinata HOM05D008628 ORTHO05D010443 5.2e-13 77.8 68 50.0
C07p28310 Brassica napus HOM05D008628 ORTHO05D010443 6.8e-13 77.4 70 47.1
BolC7t43371H Brassica oleracea HOM05D008628 ORTHO05D010443 6.8e-13 77.4 70 47.1
Thhalv10001145m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 6.8e-13 77.4 77 46.8
AT5G45277 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 1.5e-12 76.3 68 50.0
A06p46700 Brassica napus HOM05D008628 ORTHO05D010443 2.0e-12 75.9 70 48.6
BcaC06g34456 Brassica carinata HOM05D008628 ORTHO05D010443 3.4e-12 75.1 68 47.1
Thhalv10001147m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 3.4e-12 75.1 71 49.3
Carub.0005s1637 Capsella rubella HOM05D008628 ORTHO05D010443 1.7e-11 72.8 70 52.9
AT3G50020 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 3.7e-11 71.6 70 48.6
Thhalv10010855m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 3.7e-11 71.6 70 50.0
Thhalv10011057m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 6.3e-11 70.9 70 51.4
Thhalv10011141m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 6.3e-11 70.9 70 50.0
Thhalv10011101m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 8.3e-11 70.5 70 50.0
AL5G30120 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 1.4e-10 69.7 75 46.7
AL5G30140 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 3.1e-10 68.6 70 48.6
Thhalv10011083m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 7.0e-10 67.4 70 48.6
Thhalv10011104m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 7.0e-10 67.4 70 50.0
SpUn1030_0010 Schrenkiella parvula HOM05D008628 ORTHO05D010443 1.6e-09 66.2 68 48.5
Sp5g12080 Schrenkiella parvula HOM05D002032 ORTHO05D002247 2.0e-09 65.9 68 45.6
BraA06t27542Z Brassica rapa HOM05D008628 ORTHO05D010443 5.9e-09 64.3 70 42.9
TWI34G0474 Tripterygium wilfordii HOM05D008628 ORTHO05D010443 1.3e-08 63.2 68 47.1
Thhalv10011021m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 5.0e-08 61.2 70 47.1
A06p47800 Brassica napus HOM05D001004 ORTHO05D000653 1.9e-07 59.3 76 47.4
Eucgr.F00211 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.2e-06 56.6 68 47.1
BolC7t43147H Brassica oleracea HOM05D001004 ORTHO05D000653 4.7e-06 54.7 68 48.5
BraA06t27650Z Brassica rapa HOM05D001004 ORTHO05D000653 4.7e-06 54.7 68 48.5
Actinidia05460 Actinidia chinensis HOM05D001004 ORTHO05D000653 6.1e-06 54.3 75 45.3
BcaC06g31688 Brassica carinata HOM05D001004 ORTHO05D000653 6.1e-06 54.3 68 48.5
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 6.1e-06 54.3 70 41.4
Thhalv10003303m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 8.0e-06 53.9 74 47.3


User provided reference genes

Program Settings