Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.1e-111 405.2 217 100.0
Rhsim10G0158100 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.9e-47 193.4 133 75.2
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.9e-24 116.3 151 43.7
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 4.2e-23 112.5 145 41.4
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.3e-20 102.8 123 47.2
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 4.3e-20 102.4 128 44.5
Rhsim12G0034900 Rhododendron simsii HOM05D042119 ORTHO05D007789 1.3e-19 100.9 136 47.1
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.3e-16 90.9 130 38.5
RhsimUnG0148900 Rhododendron simsii HOM05D009663 ORTHO05D011812 1.3e-16 90.9 113 43.4
Rhsim12G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.3e-13 80.1 137 38.0
Rhsim13G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.1e-13 79.0 94 46.8
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-12 77.4 128 39.8
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.0e-12 77.0 126 34.9
Rhsim08G0153800 Rhododendron simsii HOM05D042119 ORTHO05D007789 5.7e-12 75.5 134 38.8
Rhsim12G0082100 Rhododendron simsii HOM05D009663 ORTHO05D007789 9.7e-12 74.7 144 35.4
Rhsim06G0049300 Rhododendron simsii HOM05D031946 ORTHO05D007789 2.2e-11 73.6 135 35.6
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 2.8e-11 73.2 127 39.4
Rhsim07G0120100 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.7e-11 72.8 117 34.2
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.3e-11 72.0 106 38.7
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.2e-11 71.6 123 34.1
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.1e-10 71.2 137 38.0
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-10 70.9 106 40.6
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.4e-10 70.1 128 37.5
vmacro14314 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 2.4e-10 70.1 128 35.9
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.1e-10 69.7 106 39.6
vmacro01230 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 5.3e-10 68.9 136 35.3
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.9e-10 68.6 149 34.2
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.1e-10 68.2 106 36.8
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.1e-10 68.2 106 36.8
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-09 67.8 106 37.7
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-09 67.0 106 37.7
vmacro05103 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 2.6e-09 66.6 138 33.3
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.4e-09 66.2 106 36.8
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.7e-09 65.1 106 36.8
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 1.0e-08 64.7 95 38.9
Lj1A725T41 Lonicera japonica HOM05D009663 ORTHO05D007789 1.7e-08 63.9 133 27.8
Rhsim12G0199500 Rhododendron simsii HOM05D000727 ORTHO05D000541 2.9e-08 63.2 109 40.4
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 5.0e-08 62.4 115 31.3
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.5e-08 62.0 95 37.9
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 6.5e-08 62.0 125 31.2
Rhsim06G0038200 Rhododendron simsii HOM05D038451 ORTHO05D007789 6.5e-08 62.0 126 32.5
Rhsim06G0059100 Rhododendron simsii HOM05D031946 ORTHO05D007789 6.5e-08 62.0 100 38.0
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 6.5e-08 62.0 111 36.0
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 6.5e-08 62.0 113 37.2
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 8.5e-08 61.6 130 34.6
vmacro20699 Vaccinium macrocarpon HOM05D046650 ORTHO05D050667 8.5e-08 61.6 79 43.0
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-07 60.8 95 41.1
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 2.5e-07 60.1 115 30.4
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 2.5e-07 60.1 95 36.8
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 3.2e-07 59.7 123 31.7
Rhsim06G0044600 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.2e-07 59.7 127 31.5
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 7.2e-07 58.5 130 32.3
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 9.4e-07 58.2 99 33.3
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 9.4e-07 58.2 96 37.5
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 9.4e-07 58.2 96 37.5
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 9.4e-07 58.2 96 37.5
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 1.2e-06 57.8 86 39.5
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 1.2e-06 57.8 99 32.3
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.6e-06 57.4 97 38.1
Nitab4.5_0000613g0220 Nicotiana tabacum HOM05D010354 ORTHO05D012840 2.7e-06 56.6 128 28.9
vmacro20700 Vaccinium macrocarpon HOM05D009663 ORTHO05D013651 6.1e-06 55.5 69 46.4
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 7.9e-06 55.1 121 31.4


User provided reference genes

Program Settings