Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 1.9e-198 695.7 350 100.0
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 3.0e-132 475.7 351 72.1
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 3.5e-112 409.1 348 63.5
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 2.2e-106 389.8 348 61.8
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 1.4e-105 387.1 351 60.7
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 9.2e-105 384.4 365 59.5
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.6e-104 383.6 350 60.9
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 3.0e-103 379.4 350 58.6
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 4.3e-102 375.6 350 60.6
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 4.7e-101 372.1 357 60.8
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 6.2e-101 371.7 352 59.7
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 8.1e-101 371.3 352 59.4
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 6.8e-100 368.2 351 58.1
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 9.9e-99 364.4 352 59.4
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 1.3e-98 364.0 352 58.8
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 2.7e-96 356.3 355 57.7
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 3.5e-96 355.9 356 57.9
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 4.6e-96 355.5 347 57.9
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 1.0e-95 354.4 352 56.5
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 2.3e-95 353.2 329 62.6
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 3.9e-95 352.4 358 57.3
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 5.1e-95 352.1 351 55.6
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 2.5e-94 349.7 348 55.5
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 3.3e-94 349.4 349 53.9
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 3.3e-94 349.4 349 56.7
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 3.3e-94 349.4 356 55.3
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 5.6e-94 348.6 350 55.1
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 7.3e-94 348.2 364 56.0
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 4.7e-93 345.5 358 54.5
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 1.4e-92 344.0 350 55.1
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 1.8e-92 343.6 349 55.3
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 1.8e-92 343.6 354 55.1
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 9.0e-92 341.3 349 54.2
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 2.0e-91 340.1 357 54.1
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 4.4e-91 339.0 351 55.0
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 7.6e-91 338.2 352 55.7
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 1.3e-90 337.4 347 53.6
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 1.7e-90 337.0 347 53.6
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 1.7e-90 337.0 347 53.6
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 2.2e-90 336.7 347 53.6
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 2.2e-90 336.7 350 53.4
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 6.4e-90 335.1 399 50.6
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 1.4e-89 334.0 381 51.7
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 2.4e-89 333.2 346 53.2
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 4.2e-89 332.4 355 54.1
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 7.1e-89 331.6 352 53.4
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 7.1e-89 331.6 355 54.4
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.6e-88 330.5 356 54.2
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 1.6e-88 330.5 357 54.3
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 2.1e-88 330.1 355 53.8
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 2.7e-88 329.7 355 54.1
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 1.3e-87 327.4 355 54.1
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 1.3e-87 327.4 351 52.4
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 2.3e-87 326.6 353 52.7
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 3.9e-87 325.9 357 53.8
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 3.9e-87 325.9 352 52.8
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 1.9e-86 323.6 335 53.7
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 5.6e-86 322.0 358 53.4
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 1.3e-85 320.9 356 51.7
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 2.1e-85 320.1 349 52.1
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 2.8e-85 319.7 351 55.0
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 4.8e-85 318.9 358 52.2
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.1e-84 317.8 351 51.9
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 2.4e-84 316.6 357 54.6
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 5.3e-84 315.5 351 51.6
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 6.9e-84 315.1 352 52.6
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 2.6e-83 313.2 351 51.0
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 7.6e-83 311.6 351 52.1
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 1.3e-82 310.8 332 53.3
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 1.7e-82 310.5 354 50.8
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 2.9e-82 309.7 351 53.0
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 8.4e-82 308.1 354 52.8
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 5.4e-81 305.4 345 50.4
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.0e-79 301.2 350 50.0
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 1.0e-79 301.2 304 54.3
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.5e-78 297.4 244 65.2
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 2.5e-78 296.6 332 52.1
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 2.5e-78 296.6 347 49.3
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 2.4e-76 290.0 239 64.0
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 3.1e-76 289.7 292 53.1
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 4.5e-75 285.8 237 63.3
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 7.6e-75 285.0 225 64.0
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 2.9e-74 283.1 244 61.9
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.6e-72 277.3 397 44.8
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 2.7e-72 276.6 222 64.4
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 7.9e-72 275.0 270 55.2
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 3.0e-71 273.1 327 49.5
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 8.7e-71 271.6 232 62.5
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 5.6e-70 268.9 235 62.6
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 9.6e-70 268.1 228 62.3
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 1.8e-68 263.8 346 47.4
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.9e-63 246.1 322 46.3
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 2.8e-61 240.0 323 44.6
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 8.2e-61 238.4 242 53.3
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 4.1e-60 236.1 349 42.7
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 6.1e-56 222.2 350 39.4
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 3.0e-55 219.9 368 41.6
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 6.7e-55 218.8 178 61.2
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 8.8e-55 218.4 297 42.4
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 1.2e-48 198.0 368 35.1
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 1.1e-44 184.9 249 37.3
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 1.2e-43 181.4 287 37.3
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 1.0e-42 178.3 186 57.0
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 2.9e-42 176.8 175 50.9
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 3.8e-42 176.4 297 35.0
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 6.1e-40 169.1 235 48.1
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 2.3e-39 167.2 225 48.0
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 8.8e-31 138.7 180 38.3
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 6.1e-24 115.9 157 49.0
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 8.8e-23 112.1 267 31.8
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 7.5e-22 109.0 55 87.3
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 2.7e-19 100.5 59 74.6
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 7.7e-19 99.0 80 66.2
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 2.3e-18 97.4 88 56.8
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 8.6e-18 95.5 59 74.6
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 8.6e-18 95.5 79 60.8
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.5e-17 94.7 85 62.4
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.7e-13 81.3 83 56.6
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 1.7e-13 81.3 144 36.8
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 2.3e-07 60.8 138 29.7
DCAR_011495 Daucus carota HOM05D006522 ORTHO05D008183 6.8e-07 59.3 55 58.2
DCAR_011494 Daucus carota HOM05D006522 ORTHO05D008183 2.0e-06 57.8 63 50.8


User provided reference genes

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