Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 0.0e+00 1101.3 571 100.0
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 7.0e-78 295.8 376 47.1
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 2.9e-63 247.3 363 41.6
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.1e-57 228.8 370 39.5
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 1.3e-52 211.8 340 38.2
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 1.5e-51 208.4 361 35.5
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 2.5e-51 207.6 365 36.7
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 9.6e-51 205.7 333 36.9
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 1.3e-50 205.3 353 35.7
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 1.6e-50 204.9 333 36.3
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 1.6e-50 204.9 333 36.3
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 2.1e-50 204.5 370 35.7
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 4.8e-50 203.4 387 34.6
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 8.1e-50 202.6 356 38.5
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.8e-49 201.4 356 38.2
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.8e-49 201.4 351 35.6
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 4.0e-49 200.3 356 38.2
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 5.3e-49 199.9 387 33.6
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 9.0e-49 199.1 348 35.9
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 1.2e-48 198.7 333 35.7
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 1.2e-48 198.7 363 35.3
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 2.0e-48 198.0 334 34.7
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 3.4e-48 197.2 355 34.6
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 3.4e-48 197.2 353 36.5
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 7.6e-48 196.1 337 35.3
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 7.6e-48 196.1 349 36.1
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.3e-47 195.3 349 36.1
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 2.2e-47 194.5 339 34.8
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 2.2e-47 194.5 366 35.0
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.9e-47 194.1 340 36.5
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 2.9e-47 194.1 333 35.1
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 4.9e-47 193.4 333 35.4
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 4.9e-47 193.4 337 37.7
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 4.9e-47 193.4 350 37.1
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 1.1e-46 192.2 127 73.2
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 2.4e-46 191.0 361 35.7
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 2.4e-46 191.0 335 36.1
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 3.2e-46 190.7 343 36.2
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 3.2e-46 190.7 135 68.1
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 3.2e-46 190.7 333 35.1
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 7.1e-46 189.5 332 36.7
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 9.3e-46 189.1 349 34.4
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.6e-45 188.3 135 67.4
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.6e-45 188.3 135 67.4
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 2.1e-45 188.0 349 34.7
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 2.7e-45 187.6 119 71.4
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 3.5e-45 187.2 380 35.8
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 4.6e-45 186.8 127 70.9
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 4.6e-45 186.8 333 34.8
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 4.6e-45 186.8 346 35.5
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 4.6e-45 186.8 128 68.0
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 7.9e-45 186.0 137 65.7
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 7.9e-45 186.0 344 34.6
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 1.3e-44 185.3 137 64.2
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 1.7e-44 184.9 122 68.9
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 1.7e-44 184.9 118 73.7
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 2.3e-44 184.5 118 72.0
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 3.0e-44 184.1 137 64.2
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 3.9e-44 183.7 342 35.1
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 2.5e-43 181.0 137 63.5
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 3.3e-43 180.6 164 56.7
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 3.3e-43 180.6 118 69.5
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 4.3e-43 180.3 131 65.6
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 5.6e-43 179.9 126 67.5
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 7.4e-43 179.5 107 72.9
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 7.4e-43 179.5 137 63.5
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 1.3e-42 178.7 121 66.9
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 1.3e-42 178.7 400 31.8
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 1.6e-42 178.3 137 63.5
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 2.8e-42 177.6 136 64.7
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 4.8e-42 176.8 141 63.1
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 4.8e-42 176.8 137 62.8
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 6.2e-42 176.4 349 33.2
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 4.0e-41 173.7 136 63.2
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 5.3e-41 173.3 119 67.2
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 1.3e-39 168.7 125 65.6
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 1.3e-39 168.7 156 56.4
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 3.8e-39 167.2 124 61.3
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 4.9e-39 166.8 116 63.8
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 5.5e-38 163.3 114 64.0
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 5.5e-38 163.3 112 67.9
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 1.2e-37 162.2 115 63.5
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 1.6e-37 161.8 115 61.7
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 3.9e-36 157.1 125 58.4
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 1.1e-35 155.6 137 57.7
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.4e-33 148.7 102 61.8
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 1.5e-32 145.2 121 58.7
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 8.4e-31 139.4 139 51.8
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.9e-22 111.7 283 31.8
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 1.3e-18 99.0 75 61.3
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 6.3e-18 96.7 52 75.0
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 4.1e-17 94.0 52 73.1
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.0e-15 89.4 64 59.4
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 5.5e-14 83.6 66 60.6
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 9.4e-14 82.8 70 62.9
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 9.4e-14 82.8 276 25.7
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 3.9e-12 77.4 72 51.4
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 1.1e-11 75.9 45 73.3
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 2.0e-11 75.1 74 50.0
Pp3s30_790 Physcomitrium patens HOM05D002374 ORTHO05D003594 3.2e-06 57.8 91 34.1


User provided reference genes

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