Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0143500 Rhododendron simsii HOM05D001827 ORTHO05D001790 2.9e-174 615.1 316 100.0
Aa31LG5G11980 Aethionema arabicum HOM05D001812 ORTHO05D001874 3.6e-15 86.7 176 42.0
Eucgr.F02039 Eucalyptus grandis HOM05D001827 ORTHO05D001790 8.3e-12 75.5 180 40.0
Medtr3g007920 Medicago truncatula HOM05D001827 ORTHO05D001790 4.1e-11 73.2 145 40.0
Peaxi162Scf00006g00416 Petunia axillaris HOM05D001827 ORTHO05D001790 1.2e-10 71.6 179 38.5
Glyma.02G301400 Glycine max HOM05D001827 ORTHO05D001790 2.0e-10 70.9 180 38.9
Lj8C179T7 Lonicera japonica HOM05D001827 ORTHO05D001790 2.0e-10 70.9 133 43.6
Cc05_g15100 Coffea canephora HOM05D001827 ORTHO05D001790 7.7e-10 68.9 125 44.8
Medtr5g096080 Medicago truncatula HOM05D001827 ORTHO05D001790 1.0e-09 68.6 145 39.3
TWI38G0190 Tripterygium wilfordii HOM05D001827 ORTHO05D001790 1.3e-09 68.2 180 36.7
CiPaw.12G139200 Carya illinoinensis HOM05D001827 ORTHO05D001790 3.8e-09 66.6 160 35.0
MSTRG.14494 Avicennia marina HOM05D001827 ORTHO05D001790 5.0e-09 66.2 180 33.9
Duzib170G0264 Durio zibethinus HOM05D003625 ORTHO05D004382 6.6e-09 65.9 96 47.9
Phvul.008G279900 Phaseolus vulgaris HOM05D001827 ORTHO05D001790 6.6e-09 65.9 151 37.7
Sed0007556 Sechium edule HOM05D001827 ORTHO05D001790 6.6e-09 65.9 180 36.7
Aa31LG3G11780 Aethionema arabicum HOM05D001827 ORTHO05D001790 8.6e-09 65.5 194 34.0
Duzib213G1002 Durio zibethinus HOM05D001827 ORTHO05D001790 1.1e-08 65.1 125 43.2
Nitab4.5_0004583g0090 Nicotiana tabacum HOM05D001827 ORTHO05D001790 1.5e-08 64.7 101 41.6
Oeu005481.1 Olea europaea HOM05D001827 ORTHO05D001790 1.5e-08 64.7 88 50.0
THA.LOC104811675 Tarenaya hassleriana HOM05D001827 ORTHO05D001790 1.5e-08 64.7 197 33.0
Lj1C892G3 Lonicera japonica HOM05D001827 ORTHO05D001790 1.9e-08 64.3 180 36.1
Nn1g07767 Nelumbo nucifera HOM05D001827 ORTHO05D001790 4.2e-08 63.2 70 55.7
BcaC04g20191 Brassica carinata HOM05D001827 ORTHO05D001790 9.5e-08 62.0 147 38.1
C09p46840 Brassica napus HOM05D001827 ORTHO05D001790 9.5e-08 62.0 147 38.1
BolC9t57534H Brassica oleracea HOM05D001827 ORTHO05D001790 9.5e-08 62.0 147 38.1
CsaV3_3G004170 Cucumis sativus L. HOM05D001827 ORTHO05D001790 9.5e-08 62.0 96 44.8
Gohir.D05G384900 Gossypium hirsutum HOM05D001827 ORTHO05D001790 9.5e-08 62.0 96 43.8
PGR083G1584 Punica granatum HOM05D001827 ORTHO05D001790 9.5e-08 62.0 127 42.5
MELO3C014113.2 Cucumis melo HOM05D001827 ORTHO05D001790 1.2e-07 61.6 96 44.8
Nitab4.5_0003692g0050 Nicotiana tabacum HOM05D001827 ORTHO05D001790 1.6e-07 61.2 96 43.8
unitig_0.g2012 Utricularia gibba HOM05D001827 ORTHO05D001790 1.6e-07 61.2 173 35.3
Oeu046939.1 Olea europaea HOM05D001827 ORTHO05D001790 2.1e-07 60.8 186 33.9
C03p16210 Brassica napus HOM05D001827 ORTHO05D001790 2.8e-07 60.5 183 33.9
CiPaw.11G205100 Carya illinoinensis HOM05D001827 ORTHO05D001790 2.8e-07 60.5 96 45.8
CDE02G3428 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 2.8e-07 60.5 182 35.2
Sp6g17740 Schrenkiella parvula HOM05D001827 ORTHO05D001790 2.8e-07 60.5 168 35.1
Solyc07g065680.3 Solanum lycopersicum HOM05D001827 ORTHO05D001790 2.8e-07 60.5 95 45.3
SEGI_39497 Sequoiadendron giganteum HOM05D001827 ORTHO05D001790 3.6e-07 60.1 136 39.0
A10p13080 Brassica napus HOM05D001827 ORTHO05D001790 4.7e-07 59.7 165 35.8
Carub.0008s1622 Capsella rubella HOM05D001827 ORTHO05D001790 6.1e-07 59.3 196 32.7
Nn1g07551 Nelumbo nucifera HOM05D001827 ORTHO05D001790 8.0e-07 58.9 91 46.2
Sc03g0011630 Simmondsia chinensis HOM05D001827 ORTHO05D001790 8.0e-07 58.9 131 38.2
AT5G55860 Arabidopsis thaliana HOM05D001827 ORTHO05D001790 1.0e-06 58.5 184 33.2
Migut.H01749 Erythranthe guttata HOM05D001827 ORTHO05D001790 2.3e-06 57.4 114 39.5
PGSC0003DMG400022271 Solanum tuberosum HOM05D001827 ORTHO05D001790 3.0e-06 57.0 180 34.4
AL8G31440 Arabidopsis lyrata HOM05D001827 ORTHO05D001790 4.0e-06 56.6 184 32.6
CARHR269240 Cardamine hirsuta HOM05D001827 ORTHO05D001790 4.0e-06 56.6 151 37.1
Thhalv10012934m.g Eutrema salsugineum HOM05D001827 ORTHO05D001790 4.0e-06 56.6 142 36.6
Psat2g006880 Pisum sativum HOM05D001827 ORTHO05D001790 5.2e-06 56.2 126 39.7
VMungo0647G0995 Vigna mungo HOM05D001827 ORTHO05D001790 5.2e-06 56.2 140 37.1
Lalb_Chr20g0114111 Lupinus albus HOM05D001827 ORTHO05D001790 6.8e-06 55.8 135 37.0


User provided reference genes

Program Settings