Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0138100 Rhododendron simsii HOM05D004825 ORTHO05D005415 3.1e-148 528.5 271 100.0
vmacro12851 Vaccinium macrocarpon HOM05D004825 ORTHO05D005415 2.3e-103 379.4 236 83.9
Actinidia06813 Actinidia chinensis HOM05D004825 ORTHO05D005415 8.2e-101 370.9 255 75.7
Dinv09864 Davidia involucrata HOM05D004825 ORTHO05D005415 1.2e-88 330.5 255 69.8
Hma1.2p1_0220F.1_g093020 Hydrangea macrophylla HOM05D004825 ORTHO05D005415 1.5e-83 313.5 256 66.0
CsaV3_2G010380 Cucumis sativus L. HOM05D004825 ORTHO05D005415 5.9e-83 311.6 255 65.5
MELO3C008585.2 Cucumis melo HOM05D004825 ORTHO05D005415 1.0e-82 310.8 255 65.5
Cfa006284 Carpinus fangiana HOM05D004825 ORTHO05D005415 1.3e-82 310.5 255 65.1
CiPaw.07G074800 Carya illinoinensis HOM05D004825 ORTHO05D005415 1.4e-81 307.0 255 64.7
Sed0020944 Sechium edule HOM05D004825 ORTHO05D005415 7.2e-81 304.7 256 63.3
TAR374G0592 Trochodendron aralioides HOM05D004825 ORTHO05D005415 1.2e-80 303.9 242 65.7
FvH4_6g00770 Fragaria vesca HOM05D004825 ORTHO05D005415 2.2e-77 293.1 256 60.5
FAN14G5305 Fragaria x ananassa HOM05D004825 ORTHO05D005415 2.2e-77 293.1 256 60.5
Oeu023621.1 Olea europaea HOM05D004825 ORTHO05D005415 2.4e-76 289.7 255 60.0
Thecc.05G205800 Theobroma cacao HOM05D004825 ORTHO05D005415 3.1e-76 289.3 255 60.4
RcHm_v2.0_Chr3g0448251 Rosa chinensis HOM05D004825 ORTHO05D005415 5.3e-76 288.5 256 59.8
FAN05G3281 Fragaria x ananassa HOM05D004825 ORTHO05D005415 7.0e-76 288.1 256 59.8
Duzib128G0048 Durio zibethinus HOM05D004825 ORTHO05D005415 1.6e-75 287.0 258 59.3
FAN09G1822 Fragaria x ananassa HOM05D004825 ORTHO05D005415 3.5e-75 285.8 256 59.0
GSVIVG01019145001 Vitis vinifera HOM05D004825 ORTHO05D005415 5.9e-75 285.0 280 57.1
FAN02G3908 Fragaria x ananassa HOM05D004825 ORTHO05D005415 1.0e-74 284.3 256 58.6
Prupe.6G359000 Prunus persica HOM05D004825 ORTHO05D005415 2.9e-74 282.7 257 59.9
Gorai.006G054700 Gossypium raimondii HOM05D004825 ORTHO05D005415 1.1e-73 280.8 253 58.1
Gohir.D09G053068 Gossypium hirsutum HOM05D004825 ORTHO05D005415 1.5e-73 280.4 253 58.1
TWI59G0982 Tripterygium wilfordii HOM05D004825 ORTHO05D005415 5.5e-73 278.5 260 56.5
MD12G1258300 Malus domestica HOM05D004825 ORTHO05D005415 9.4e-73 277.7 258 59.7
Gohir.A09G053766 Gossypium hirsutum HOM05D004825 ORTHO05D005415 1.6e-72 276.9 253 57.7
Potri.013G087950 Populus trichocarpa HOM05D004825 ORTHO05D005415 1.6e-72 276.9 255 59.2
Sc06g0005090 Simmondsia chinensis HOM05D004825 ORTHO05D005415 2.1e-72 276.6 255 60.0
Nn3g16227 Nelumbo nucifera HOM05D004825 ORTHO05D005415 4.7e-72 275.4 236 59.7
Haze_04525 Corylus avellana HOM05D004825 ORTHO05D005415 1.0e-71 274.2 255 60.0
Ciclev10007912m.g Citrus clementina HOM05D004825 ORTHO05D005415 1.4e-71 273.9 254 58.3
CAN.G1086.4 Capsicum annuum HOM05D004825 ORTHO05D005415 5.2e-71 271.9 254 57.9
Atru.chr12.2135 Acer truncatum HOM05D004825 ORTHO05D005415 1.2e-70 270.8 255 55.7
QL02p047766 Quercus lobata HOM05D004825 ORTHO05D005415 1.5e-70 270.4 235 62.6
Manes.09G184100 Manihot esculenta HOM05D004825 ORTHO05D005415 2.0e-70 270.0 264 54.9
DCAR_003341 Daucus carota HOM05D004825 ORTHO05D005415 1.3e-69 267.3 255 56.9
SGA_v2.0_scaffold122G33281 Striga asiatica HOM05D004825 ORTHO05D005415 1.3e-69 267.3 263 57.8
Migut.I01185 Erythranthe guttata HOM05D004825 ORTHO05D005415 8.2e-69 264.6 257 55.3
Solyc11g018740.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 3.1e-68 262.7 272 52.9
Sopen11g009760 Solanum pennellii HOM05D004825 ORTHO05D005415 5.3e-68 261.9 272 52.9
Cc09_g03390 Coffea canephora HOM05D004825 ORTHO05D005415 7.0e-68 261.5 255 57.3
Sabra13G0069900 Salix brachista HOM05D004825 ORTHO05D005415 1.2e-67 260.8 255 57.6
HanXRQChr01g0025761 Helianthus annuus HOM05D004825 ORTHO05D005415 2.2e-66 256.5 251 54.6
MSTRG.10886 Avicennia marina HOM05D004825 ORTHO05D005415 1.1e-65 254.2 252 56.3
A02p13010 Brassica napus HOM05D004825 ORTHO05D005415 1.2e-64 250.8 257 55.3
BraA02t06357Z Brassica rapa HOM05D004825 ORTHO05D005415 1.2e-64 250.8 257 55.3
SalBow6G3714 Salvia bowleyana HOM05D004825 ORTHO05D005415 2.1e-64 250.0 254 53.5
Nitab4.5_0000167g0020 Nicotiana tabacum HOM05D004825 ORTHO05D005415 3.6e-64 249.2 238 57.1
BcaC03g14674 Brassica carinata HOM05D004825 ORTHO05D005415 4.7e-64 248.8 257 54.9
C02p21130 Brassica napus HOM05D004825 ORTHO05D005415 4.7e-64 248.8 257 54.9
BolC2t08253H Brassica oleracea HOM05D004825 ORTHO05D005415 4.7e-64 248.8 257 54.9
CANSAT54G0263 Cannabis sativa HOM05D004825 ORTHO05D005415 4.7e-64 248.8 275 51.3
Potri.009G121800 Populus trichocarpa HOM05D004825 ORTHO05D005415 4.7e-64 248.8 233 60.1
Carub.0005s1010 Capsella rubella HOM05D004825 ORTHO05D005415 6.1e-64 248.4 252 52.8
ECA233G4148 Erigeron canadensis HOM05D004825 ORTHO05D005415 1.0e-63 247.7 258 51.6
Nitab4.5_0004158g0040 Nicotiana tabacum HOM05D004825 ORTHO05D005415 1.4e-63 247.3 247 55.5
RcHm_v2.0_Chr3g0448211 Rosa chinensis HOM05D004825 ORTHO05D005415 3.0e-63 246.1 251 53.8
Lsat_1_v5_gn_8_2080 Lactuca sativa HOM05D004825 ORTHO05D005415 1.2e-62 244.2 253 53.8
AT3G44370 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 1.5e-62 243.8 252 52.4
BcaB05g24081 Brassica carinata HOM05D004825 ORTHO05D005415 3.4e-62 242.7 257 53.7
AL5G22510 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 4.4e-62 242.3 252 52.4
AL5G22530 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 4.4e-62 242.3 252 52.4
CARHR104500 Cardamine hirsuta HOM05D004825 ORTHO05D005415 5.7e-62 241.9 245 52.7
Glyma.18G240200 Glycine max HOM05D004825 ORTHO05D005415 5.7e-62 241.9 271 51.3
Thhalv10022463m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 2.2e-61 240.0 257 53.7
Lalb_Chr19g0126781 Lupinus albus HOM05D004825 ORTHO05D005415 2.2e-61 240.0 276 49.6
BcaB01g01166 Brassica carinata HOM05D004825 ORTHO05D005415 2.8e-61 239.6 250 52.8
ClCG11G007410 Citrullus lanatus HOM05D004825 ORTHO05D005415 4.8e-61 238.8 241 57.7
Eucgr.B01387 Eucalyptus grandis HOM05D004825 ORTHO05D005415 4.8e-61 238.8 254 51.6
AT1G65080 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 6.3e-61 238.4 257 54.1
PSO478G4613 Papaver somniferum HOM05D004825 ORTHO05D005415 6.3e-61 238.4 239 53.1
BraA06t25290Z Brassica rapa HOM05D004825 ORTHO05D005415 1.4e-60 237.3 254 51.2
Phvul.008G056000 Phaseolus vulgaris HOM05D004825 ORTHO05D005415 1.8e-60 236.9 285 49.5
SalBow6G0845 Salvia bowleyana HOM05D004825 ORTHO05D005415 1.8e-60 236.9 262 49.6
AL2G19720 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 2.4e-60 236.5 257 52.9
A06p22020 Brassica napus HOM05D004825 ORTHO05D005415 4.1e-60 235.7 254 50.8
THA.LOC104805710 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 4.1e-60 235.7 259 54.8
BcaC01g02045 Brassica carinata HOM05D004825 ORTHO05D005415 5.4e-60 235.3 254 50.8
C03p69210 Brassica napus HOM05D004825 ORTHO05D005415 5.4e-60 235.3 254 50.8
BolC3t19174H Brassica oleracea HOM05D004825 ORTHO05D005415 5.4e-60 235.3 254 50.8
Psat3g104280 Pisum sativum HOM05D004825 ORTHO05D005415 9.1e-60 234.6 276 51.1
Lj1g0016449 Lotus japonicus HOM05D004825 ORTHO05D005415 1.2e-59 234.2 273 50.2
TPR.G29414 Trifolium pratense HOM05D004825 ORTHO05D005415 1.2e-59 234.2 272 50.0
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 1.6e-59 233.8 240 52.5
Thhalv10010266m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 1.6e-59 233.8 247 51.4
PGR119G2407 Punica granatum HOM05D004825 ORTHO05D005415 1.6e-59 233.8 256 50.8
Sp5g19610 Schrenkiella parvula HOM05D004825 ORTHO05D005415 2.0e-59 233.4 257 51.8
SpUn0108_0010 Schrenkiella parvula HOM05D004825 ORTHO05D005415 2.0e-59 233.4 257 51.8
Sp5g16820 Schrenkiella parvula HOM05D004825 ORTHO05D005415 2.7e-59 233.0 249 51.8
THA.LOC104814783 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 4.5e-59 232.3 238 54.6
Carub.0002s1042 Capsella rubella HOM05D004825 ORTHO05D005415 1.0e-58 231.1 257 52.5
Hund07323 Selenicereus undatus HOM05D004825 ORTHO05D005415 1.0e-58 231.1 240 52.1
VMungo1383G1726 Vigna mungo HOM05D004825 ORTHO05D005415 1.0e-58 231.1 279 48.7
EL10Ac4g09418 Beta vulgaris HOM05D004825 ORTHO05D005415 1.3e-58 230.7 255 52.9
PGR119G0192 Punica granatum HOM05D004825 ORTHO05D005415 1.3e-58 230.7 242 53.7
Medtr7g079500 Medicago truncatula HOM05D004825 ORTHO05D005415 3.8e-58 229.2 279 48.4
Ah.06g195620 Amaranthus hybridus HOM05D004825 ORTHO05D005415 6.6e-58 228.4 255 51.8
COL.COLO4_07810 Corchorus olitorius HOM05D004825 ORTHO05D005415 8.6e-58 228.0 188 61.2
Aa31LG2G2270 Aethionema arabicum HOM05D004825 ORTHO05D005415 2.5e-57 226.5 267 50.2
Sabra09G0094100 Salix brachista HOM05D004825 ORTHO05D005415 7.2e-57 224.9 218 57.8
PSO017G3896 Papaver somniferum HOM05D004825 ORTHO05D005415 9.5e-57 224.6 237 50.6
arahy.Tifrunner.gnm1.ann1.B3BVJM Arachis hypogaea HOM05D004825 ORTHO05D005415 1.6e-56 223.8 272 46.7
Aqoxy1G01799 Aquilegia oxysepala HOM05D004825 ORTHO05D005415 3.6e-56 222.6 248 53.2
Peaxi162Scf01013g00123 Petunia axillaris HOM05D004825 ORTHO05D005415 6.1e-56 221.9 257 50.2
Ca_07963_v3 Cicer arietinum L. HOM05D004825 ORTHO05D005415 1.2e-54 217.6 268 48.1
AUR62000357 Chenopodium quinoa HOM05D004825 ORTHO05D005415 7.5e-54 214.9 259 51.4
unitig_32.g11006 Utricularia gibba HOM05D004825 ORTHO05D005415 1.2e-48 197.6 255 45.5
AUR62006702 Chenopodium quinoa HOM05D004825 ORTHO05D005415 1.4e-47 194.1 247 49.0
Solyc11g013080.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 3.0e-47 193.0 160 60.0
CARHR056570 Cardamine hirsuta HOM05D004825 ORTHO05D005415 2.2e-45 186.8 172 58.7
HPP92_007971 Vanilla planifolia HOM05D004825 ORTHO05D005415 2.9e-45 186.4 238 43.7
arahy.Tifrunner.gnm1.ann1.T0KW2L Arachis hypogaea HOM05D004825 ORTHO05D005415 1.2e-43 181.0 272 40.4
CDE02G0647 Ceratophyllum demersum HOM05D004825 ORTHO05D005415 5.8e-38 162.2 240 42.5
ATR0582G066 Amborella trichopoda HOM05D004825 ORTHO05D005415 1.9e-36 157.1 238 40.3
Zm00001eb375410 Zea mays HOM05D004825 ORTHO05D005415 1.7e-34 150.6 261 38.7
MD12G1258500 Malus domestica HOM05D004825 ORTHO05D005415 4.0e-31 139.4 169 46.7
Cpa.g.sc18.189 Carica papaya HOM05D004825 ORTHO05D005415 3.7e-29 132.9 137 56.9
Sopen11g007800 Solanum pennellii HOM05D004825 ORTHO05D005415 7.8e-27 125.2 135 53.3
SEGI_16462 Sequoiadendron giganteum HOM05D004825 ORTHO05D005415 1.3e-26 124.4 236 33.9
Cpa.g.c33279 Carica papaya HOM05D004825 ORTHO05D005415 4.7e-24 115.9 89 62.9
AagrBONN_evm.TU.Sc2ySwM_340.165 Anthoceros agrestis HOM05D004825 ORTHO05D005415 2.2e-21 107.1 230 32.2
PGSC0003DMG401000916 Solanum tuberosum HOM05D004825 ORTHO05D005415 3.2e-20 103.2 85 57.6
PGSC0003DMG400018032 Solanum tuberosum HOM05D004825 ORTHO05D005415 4.2e-20 102.8 90 53.3
SGA_v2.0_scaffold71G24001 Striga asiatica HOM05D004825 ORTHO05D005415 1.0e-18 98.2 249 33.3
Mapoly0072s0017 Marchantia polymorpha HOM05D004825 ORTHO05D005415 3.9e-18 96.3 235 29.4
PGSC0003DMG400014032 Solanum tuberosum HOM05D004825 ORTHO05D005415 3.9e-18 96.3 85 54.1
Glyma.09G252466 Glycine max HOM05D004825 ORTHO05D005415 1.3e-13 81.3 81 59.3
Nitab4.5_0000188g0370 Nicotiana tabacum HOM05D004825 ORTHO05D005415 1.5e-09 67.8 125 36.8
EL10Ac6g14361 Beta vulgaris HOM05D004825 ORTHO05D005415 2.8e-08 63.5 57 57.9
Pp3c8_14790 Physcomitrium patens HOM05D004825 ORTHO05D005415 6.2e-08 62.4 138 28.3


User provided reference genes

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