Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 9.4e-79 297.0 170 100.0
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 1.1e-47 193.7 170 70.0
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 2.5e-47 192.6 170 61.2
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 4.3e-47 191.8 169 63.3
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 9.5e-47 190.7 172 71.5
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 8.0e-46 187.6 170 60.6
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 8.0e-46 187.6 170 62.4
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 1.4e-45 186.8 170 68.2
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 1.4e-45 186.8 170 60.0
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 1.8e-45 186.4 170 64.1
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 2.3e-45 186.0 181 66.9
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 2.3e-45 186.0 169 62.7
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 3.1e-45 185.7 173 60.1
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 4.0e-45 185.3 170 61.2
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 4.0e-45 185.3 170 58.8
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 4.0e-45 185.3 171 60.2
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 6.8e-45 184.5 175 57.1
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 6.8e-45 184.5 146 72.6
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 8.9e-45 184.1 170 62.4
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 1.2e-44 183.7 170 64.7
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 1.2e-44 183.7 91 91.2
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 2.0e-44 183.0 140 66.4
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 2.0e-44 183.0 170 58.8
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 2.0e-44 183.0 170 58.2
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 3.4e-44 182.2 91 91.2
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 3.4e-44 182.2 170 58.8
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 3.4e-44 182.2 170 58.8
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 3.4e-44 182.2 170 58.8
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 3.4e-44 182.2 91 92.3
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 4.4e-44 181.8 91 90.1
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 4.4e-44 181.8 91 91.2
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 5.8e-44 181.4 170 58.8
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 5.8e-44 181.4 163 66.3
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 7.5e-44 181.0 91 91.2
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 9.8e-44 180.6 170 65.9
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 9.8e-44 180.6 91 90.1
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 9.8e-44 180.6 91 91.2
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.3e-43 180.3 170 66.5
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.3e-43 180.3 170 66.5
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 1.3e-43 180.3 91 90.1
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 1.3e-43 180.3 91 87.9
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 1.7e-43 179.9 91 89.0
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 1.7e-43 179.9 91 89.0
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 1.7e-43 179.9 91 89.0
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 2.2e-43 179.5 91 90.1
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 2.2e-43 179.5 162 63.6
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 2.2e-43 179.5 91 90.1
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 2.2e-43 179.5 170 57.6
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 2.9e-43 179.1 170 58.2
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 2.9e-43 179.1 97 86.6
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 3.7e-43 178.7 91 87.9
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 4.9e-43 178.3 170 70.0
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 1.1e-42 177.2 170 57.6
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 1.4e-42 176.8 91 89.0
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 1.9e-42 176.4 91 89.0
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 1.9e-42 176.4 155 59.4
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 1.9e-42 176.4 155 59.4
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 1.9e-42 176.4 91 86.8
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 2.4e-42 176.0 91 86.8
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 2.4e-42 176.0 91 89.0
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 2.4e-42 176.0 91 87.9
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 2.4e-42 176.0 91 87.9
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 3.2e-42 175.6 91 89.0
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 3.2e-42 175.6 91 89.0
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 3.2e-42 175.6 91 87.9
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 4.1e-42 175.3 91 87.9
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 4.1e-42 175.3 91 87.9
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 4.1e-42 175.3 91 87.9
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 7.0e-42 174.5 91 90.1
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 1.2e-41 173.7 91 86.8
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 2.0e-41 172.9 93 87.1
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 2.7e-41 172.6 91 89.0
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 3.5e-41 172.2 91 86.8
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 3.5e-41 172.2 161 59.0
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 4.6e-41 171.8 160 60.0
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.0e-40 170.6 86 91.9
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 6.6e-40 167.9 165 59.4
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 8.6e-40 167.5 160 57.5
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 4.3e-39 165.2 82 92.7
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 4.3e-39 165.2 161 65.2
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 5.6e-39 164.9 83 91.6
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 7.3e-39 164.5 88 83.0
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 1.2e-38 163.7 192 61.5
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 1.6e-38 163.3 86 88.4
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 2.8e-38 162.5 85 87.1
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 1.1e-37 160.6 82 89.0
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 2.3e-37 159.5 80 87.5
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 3.1e-37 159.1 172 58.7
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 4.0e-37 158.7 80 90.0
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 6.8e-37 157.9 82 90.2
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 2.0e-36 156.4 77 92.2
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 4.4e-36 155.2 185 56.8
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 1.3e-35 153.7 75 92.0
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 1.4e-34 150.2 87 75.9
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 7.1e-34 147.9 82 82.9
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 1.7e-32 143.3 90 76.7
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 3.9e-32 142.1 87 72.4
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 1.5e-31 140.2 68 91.2
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 1.6e-30 136.7 79 78.5
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 1.5e-28 130.2 83 68.7
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 3.2e-26 122.5 66 84.8
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 1.6e-22 110.2 56 89.3
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 1.4e-18 97.1 47 93.6


User provided reference genes

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