Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0122800 Rhododendron simsii HOM05D004251 ORTHO05D005010 1.0e-137 493.4 247 100.0
vmacro12727 Vaccinium macrocarpon HOM05D004251 ORTHO05D005010 2.7e-119 432.2 258 87.2
Actinidia36561 Actinidia chinensis HOM05D004251 ORTHO05D005010 3.3e-117 425.2 234 90.2
Dinv13532 Davidia involucrata HOM05D004251 ORTHO05D005010 1.5e-114 416.4 239 86.2
QL06p046103 Quercus lobata HOM05D004251 ORTHO05D005010 9.4e-112 407.1 238 85.3
Hma1.2p1_0224F.1_g094630 Hydrangea macrophylla HOM05D004251 ORTHO05D005010 6.1e-111 404.4 240 85.4
QL06p046182 Quercus lobata HOM05D004251 ORTHO05D005010 6.1e-111 404.4 241 83.8
CSS0006960 Camellia sinensis var. sinensis HOM05D004251 ORTHO05D005010 3.0e-110 402.1 237 84.8
TAR625G0258 Trochodendron aralioides HOM05D004251 ORTHO05D005010 2.8e-108 395.6 241 82.6
COL.COLO4_22078 Corchorus olitorius HOM05D004251 ORTHO05D005010 3.7e-108 395.2 241 82.2
Manes.02G094600 Manihot esculenta HOM05D004251 ORTHO05D005010 6.3e-108 394.4 235 82.6
Thecc.01G035600 Theobroma cacao HOM05D004251 ORTHO05D005010 1.4e-107 393.3 242 81.0
Aa31LG1G15090 Aethionema arabicum HOM05D004251 ORTHO05D005010 2.4e-107 392.5 240 80.4
CiPaw.01G038300 Carya illinoinensis HOM05D004251 ORTHO05D005010 2.4e-107 392.5 237 82.3
ECA232G3289 Erigeron canadensis HOM05D004251 ORTHO05D005010 3.1e-107 392.1 234 80.8
GSVIVG01018958001 Vitis vinifera HOM05D004251 ORTHO05D005010 5.3e-107 391.3 236 80.9
PGR102G3108 Punica granatum HOM05D004251 ORTHO05D005010 7.0e-107 391.0 237 81.4
Oeu051950.1 Olea europaea HOM05D004251 ORTHO05D005010 9.1e-107 390.6 238 81.5
MELO3C016373.2 Cucumis melo HOM05D004251 ORTHO05D005010 2.0e-106 389.4 242 78.9
Nitab4.5_0000178g0050 Nicotiana tabacum HOM05D004251 ORTHO05D005010 2.0e-106 389.4 237 80.6
Cpa.g.sc39.20 Carica papaya HOM05D004251 ORTHO05D005010 2.6e-106 389.0 237 78.9
DCAR_017290 Daucus carota HOM05D004251 ORTHO05D005010 2.6e-106 389.0 237 81.0
TWI73G1034 Tripterygium wilfordii HOM05D004251 ORTHO05D005010 2.6e-106 389.0 237 79.7
Thhalv10024792m.g Eutrema salsugineum HOM05D004251 ORTHO05D005010 5.9e-106 387.9 239 79.5
Cc11_g04410 Coffea canephora HOM05D004251 ORTHO05D005010 7.7e-106 387.5 234 79.5
THA.LOC104821294 Tarenaya hassleriana HOM05D004251 ORTHO05D005010 1.0e-105 387.1 242 78.1
Hund13977 Selenicereus undatus HOM05D004251 ORTHO05D005010 2.2e-105 386.0 237 78.5
Carub.0008s2797 Capsella rubella HOM05D004251 ORTHO05D005010 2.9e-105 385.6 237 78.9
Lalb_Chr05g0227621 Lupinus albus HOM05D004251 ORTHO05D005010 2.9e-105 385.6 240 79.2
Prupe.7G154800 Prunus persica HOM05D004251 ORTHO05D005010 5.0e-105 384.8 240 80.4
Atru.chr3.571 Acer truncatum HOM05D004251 ORTHO05D005010 6.5e-105 384.4 234 79.5
EL10Ac6g15559 Beta vulgaris HOM05D004251 ORTHO05D005010 6.5e-105 384.4 237 78.9
CARHR281200 Cardamine hirsuta HOM05D004251 ORTHO05D005010 6.5e-105 384.4 239 78.7
Gohir.D03G014500 Gossypium hirsutum HOM05D004251 ORTHO05D005010 1.1e-104 383.6 239 79.1
Gorai.003G014800 Gossypium raimondii HOM05D004251 ORTHO05D005010 1.1e-104 383.6 239 79.5
Sed0021773 Sechium edule HOM05D004251 ORTHO05D005010 3.2e-104 382.1 237 80.2
Duzib147G0019 Durio zibethinus HOM05D004251 ORTHO05D005010 4.2e-104 381.7 241 79.7
HanXRQChr09g0274621 Helianthus annuus HOM05D004251 ORTHO05D005010 4.2e-104 381.7 235 80.0
MD02G1147300 Malus domestica HOM05D004251 ORTHO05D005010 4.2e-104 381.7 241 80.1
PSO210G3399 Papaver somniferum HOM05D004251 ORTHO05D005010 4.2e-104 381.7 242 80.2
Glyma.02G056800 Glycine max HOM05D004251 ORTHO05D005010 7.2e-104 380.9 237 79.3
Nn5g29614 Nelumbo nucifera HOM05D004251 ORTHO05D005010 7.2e-104 380.9 239 79.9
Glyma.16G139600 Glycine max HOM05D004251 ORTHO05D005010 9.4e-104 380.6 240 78.3
THA.LOC104821560 Tarenaya hassleriana HOM05D004251 ORTHO05D005010 9.4e-104 380.6 242 78.1
VMungo0251G3189 Vigna mungo HOM05D004251 ORTHO05D005010 9.4e-104 380.6 238 79.4
Sopen02g029950 Solanum pennellii HOM05D004251 ORTHO05D005010 1.2e-103 380.2 239 79.9
Ciclev10025293m.g Citrus clementina HOM05D004251 ORTHO05D005010 1.6e-103 379.8 233 80.3
Solyc02g085250.4 Solanum lycopersicum HOM05D004251 ORTHO05D005010 1.6e-103 379.8 239 79.9
Oeu033644.1 Olea europaea HOM05D004251 ORTHO05D005010 2.1e-103 379.4 256 76.2
arahy.Tifrunner.gnm1.ann1.UMLA17 Arachis hypogaea HOM05D004251 ORTHO05D005010 3.6e-103 378.6 237 78.9
AT5G49555 Arabidopsis thaliana HOM05D004251 ORTHO05D005010 4.7e-103 378.3 237 78.5
RcHm_v2.0_Chr2g0101541 Rosa chinensis HOM05D004251 ORTHO05D005010 4.7e-103 378.3 239 79.5
Sp7g14220 Schrenkiella parvula HOM05D004251 ORTHO05D005010 6.1e-103 377.9 228 79.8
arahy.Tifrunner.gnm1.ann1.UBH4LM Arachis hypogaea HOM05D004251 ORTHO05D005010 1.0e-102 377.1 234 79.1
Medtr8g077580 Medicago truncatula HOM05D004251 ORTHO05D005010 1.0e-102 377.1 240 77.9
PSO170G5998 Papaver somniferum HOM05D004251 ORTHO05D005010 1.4e-102 376.7 242 78.9
Potri.007G025300 Populus trichocarpa HOM05D004251 ORTHO05D005010 3.0e-102 375.6 239 78.7
Nitab4.5_0001385g0110 Nicotiana tabacum HOM05D004251 ORTHO05D005010 5.2e-102 374.8 246 77.2
CsaV3_4G005780 Cucumis sativus L. HOM05D004251 ORTHO05D005010 8.8e-102 374.0 241 77.2
PGSC0003DMG402003505 Solanum tuberosum HOM05D004251 ORTHO05D005010 8.8e-102 374.0 242 78.5
MSTRG.2762 Avicennia marina HOM05D004251 ORTHO05D005010 1.1e-101 373.6 243 76.5
Eucgr.D02612 Eucalyptus grandis HOM05D004251 ORTHO05D005010 1.5e-101 373.2 240 76.7
Psat4g093040 Pisum sativum HOM05D004251 ORTHO05D005010 2.0e-101 372.9 237 75.9
Sabra07G0022400 Salix brachista HOM05D004251 ORTHO05D005010 2.6e-101 372.5 239 77.8
BcaC09g50275 Brassica carinata HOM05D004251 ORTHO05D005010 3.3e-101 372.1 237 77.2
A01p21680 Brassica napus HOM05D004251 ORTHO05D005010 3.3e-101 372.1 237 77.2
C01p27030 Brassica napus HOM05D004251 ORTHO05D005010 3.3e-101 372.1 237 77.2
BolC1t02651H Brassica oleracea HOM05D004251 ORTHO05D005010 3.3e-101 372.1 237 77.2
BraA01t02077Z Brassica rapa HOM05D004251 ORTHO05D005010 3.3e-101 372.1 237 77.2
Psat4g093160 Pisum sativum HOM05D004251 ORTHO05D005010 4.4e-101 371.7 237 75.5
FAN19G0724 Fragaria x ananassa HOM05D004251 ORTHO05D005010 5.7e-101 371.3 236 79.2
CANSAT01G2654 Cannabis sativa HOM05D004251 ORTHO05D005010 9.7e-101 370.5 244 77.0
FvH4_1g13300 Fragaria vesca HOM05D004251 ORTHO05D005010 1.7e-100 369.8 236 78.8
FAN26G0083 Fragaria x ananassa HOM05D004251 ORTHO05D005010 2.2e-100 369.4 235 78.7
LjContig00448g0013547 Lotus japonicus HOM05D004251 ORTHO05D005010 1.4e-99 366.7 238 76.1
FAN28G2031 Fragaria x ananassa HOM05D004251 ORTHO05D005010 1.8e-99 366.3 234 78.6
Aqoxy5G01628 Aquilegia oxysepala HOM05D004251 ORTHO05D005010 4.1e-99 365.2 219 82.6
Lj1g0003213 Lotus japonicus HOM05D004251 ORTHO05D005010 4.1e-99 365.2 237 77.6
MD15G1261600 Malus domestica HOM05D004251 ORTHO05D005010 4.1e-99 365.2 243 77.4
AL8G23350 Arabidopsis lyrata HOM05D004251 ORTHO05D005010 7.0e-99 364.4 237 76.8
Haze_15087 Corylus avellana HOM05D004251 ORTHO05D005010 9.1e-99 364.0 237 77.2
CAN.G358.93 Capsicum annuum HOM05D004251 ORTHO05D005010 1.6e-98 363.2 212 84.9
Ca_22268_v3 Cicer arietinum L. HOM05D004251 ORTHO05D005010 3.5e-98 362.1 240 73.8
Ca_22281_v3 Cicer arietinum L. HOM05D004251 ORTHO05D005010 3.5e-98 362.1 240 73.8
BcaNung00241 Brassica carinata HOM05D004251 ORTHO05D005010 2.9e-97 359.0 237 75.5
Atru.chr3.576 Acer truncatum HOM05D004251 ORTHO05D005010 2.7e-95 352.4 234 75.2
Lsat_1_v5_gn_4_152121 Lactuca sativa HOM05D004251 ORTHO05D005010 2.7e-95 352.4 234 74.8
Duzib147G1661 Durio zibethinus HOM05D004251 ORTHO05D005010 3.0e-94 349.0 242 71.9
Oeu056756.2 Olea europaea HOM05D004251 ORTHO05D005010 6.8e-94 347.8 298 63.1
Hma1.2p1_0400F.1_g144420 Hydrangea macrophylla HOM05D004251 ORTHO05D005010 8.8e-94 347.4 240 71.7
Thecc.01G035500 Theobroma cacao HOM05D004251 ORTHO05D005010 1.5e-93 346.7 240 72.9
ClCG01G019560 Citrullus lanatus HOM05D004251 ORTHO05D005010 9.8e-93 344.0 239 71.5
COL.COLO4_22077 Corchorus olitorius HOM05D004251 ORTHO05D005010 1.8e-91 339.7 236 73.7
CsaV3_6G046240 Cucumis sativus L. HOM05D004251 ORTHO05D005010 3.1e-91 339.0 238 71.0
ATR0733G178 Amborella trichopoda HOM05D004251 ORTHO05D005010 5.4e-91 338.2 221 74.2
CiPaw.02G018000 Carya illinoinensis HOM05D004251 ORTHO05D005010 5.4e-91 338.2 239 71.5
Ciclev10025284m.g Citrus clementina HOM05D004251 ORTHO05D005010 7.0e-91 337.8 239 69.9
Gorai.003G014700 Gossypium raimondii HOM05D004251 ORTHO05D005010 9.1e-91 337.4 240 70.4
Lj1g0003281 Lotus japonicus HOM05D004251 ORTHO05D005010 2.0e-90 336.3 238 71.4
Peaxi162Scf00366g00011 Petunia axillaris HOM05D004251 ORTHO05D005010 3.5e-90 335.5 234 73.5
PGR102G0408 Punica granatum HOM05D004251 ORTHO05D005010 3.5e-90 335.5 240 68.8
HPP92_017686 Vanilla planifolia HOM05D004251 ORTHO05D005010 1.7e-89 333.2 220 72.7
GSVIVG01018957001 Vitis vinifera HOM05D004251 ORTHO05D005010 6.5e-89 331.3 240 70.0
Sed0017564 Sechium edule HOM05D004251 ORTHO05D005010 8.5e-89 330.9 239 69.0
TPR.G24109 Trifolium pratense HOM05D004251 ORTHO05D005010 2.5e-88 329.3 240 70.0
Oeu041447.3 Olea europaea HOM05D004251 ORTHO05D005010 5.5e-88 328.2 222 75.2
arahy.Tifrunner.gnm1.ann1.05783X Arachis hypogaea HOM05D004251 ORTHO05D005010 7.2e-88 327.8 242 69.0
arahy.Tifrunner.gnm1.ann1.BIDD64 Arachis hypogaea HOM05D004251 ORTHO05D005010 7.2e-88 327.8 242 69.0
Eucgr.D01664 Eucalyptus grandis HOM05D004251 ORTHO05D005010 9.4e-88 327.4 247 67.6
LjContig00448g0018994 Lotus japonicus HOM05D004251 ORTHO05D005010 9.4e-88 327.4 238 70.6
ClCG07G008380 Citrullus lanatus HOM05D004251 ORTHO05D005010 2.7e-87 325.9 201 79.1
Medtr1g034450 Medicago truncatula HOM05D004251 ORTHO05D005010 2.7e-87 325.9 240 68.3
Os12g0631800 Oryza sativa ssp. japonica HOM05D004251 ORTHO05D005010 4.1e-83 312.0 223 70.9
Zm00001eb232720 Zea mays HOM05D004251 ORTHO05D005010 2.0e-82 309.7 233 66.5
QL06p046194 Quercus lobata HOM05D004251 ORTHO05D005010 3.5e-82 308.9 225 70.2
Prupe.7G154900 Prunus persica HOM05D004251 ORTHO05D005010 2.3e-81 306.2 239 64.9
unitig_21.g20954 Utricularia gibba HOM05D004251 ORTHO05D005010 2.3e-81 306.2 227 70.0
Pp3c15_20190 Physcomitrium patens HOM05D004251 ORTHO05D005010 6.6e-81 304.7 224 66.5
Gohir.D03G014400 Gossypium hirsutum HOM05D004251 ORTHO05D005010 1.2e-79 300.4 240 65.4
SMO194G0022 Selaginella moellendorffii HOM05D004251 ORTHO05D005010 1.2e-79 300.4 218 67.9
SMO358G0577 Selaginella moellendorffii HOM05D004251 ORTHO05D005010 3.6e-79 298.9 221 66.1
BcaC09g50281 Brassica carinata HOM05D004251 ORTHO05D005010 7.5e-77 291.2 237 65.4
AagrBONN_evm.TU.Sc2ySwM_228.727 Anthoceros agrestis HOM05D004251 ORTHO05D005010 2.2e-76 289.7 219 63.0
Ca_12487_v3 Cicer arietinum L. HOM05D004251 ORTHO05D005010 1.8e-75 286.6 240 62.5
Lj2C453G4 Lonicera japonica HOM05D004251 ORTHO05D005010 3.2e-75 285.8 234 66.7
Mapoly0014s0043 Marchantia polymorpha HOM05D004251 ORTHO05D005010 4.1e-75 285.4 230 62.2
Phvul.003G253700 Phaseolus vulgaris HOM05D004251 ORTHO05D005010 3.5e-74 282.3 240 64.6
TPR.G18620 Trifolium pratense HOM05D004251 ORTHO05D005010 4.3e-72 275.4 242 59.5
AUR62004055 Chenopodium quinoa HOM05D004251 ORTHO05D005010 2.1e-63 246.5 248 58.5
AUR62007569 Chenopodium quinoa HOM05D004251 ORTHO05D005010 2.8e-63 246.1 248 58.5
MELO3C007827.2 Cucumis melo HOM05D004251 ORTHO05D005010 4.7e-63 245.4 234 58.5
FAN23G1347 Fragaria x ananassa HOM05D004251 ORTHO05D005010 1.4e-62 243.8 238 59.7
SGA_v2.0_scaffold614G53203 Striga asiatica HOM05D004251 ORTHO05D005010 5.8e-61 238.4 151 78.1
CDE04G2049 Ceratophyllum demersum HOM05D004251 ORTHO05D005010 6.6e-57 224.9 237 54.4
Dinv39988 Davidia involucrata HOM05D004251 ORTHO05D005010 1.6e-55 220.3 151 71.5
Ah.03g140880 Amaranthus hybridus HOM05D004251 ORTHO05D005010 4.7e-55 218.8 143 72.7
Cpa.g.sc6.114 Carica papaya HOM05D004251 ORTHO05D005010 2.0e-53 213.4 142 75.4
SEGI_15174 Sequoiadendron giganteum HOM05D004251 ORTHO05D005010 7.6e-53 211.5 125 83.2
Duzib264G0995 Durio zibethinus HOM05D004251 ORTHO05D005010 1.4e-38 164.1 105 73.3
PRCOL_00003920 Prasinoderma coloniale HOM05D004251 ORTHO05D005010 5.8e-37 158.7 188 48.4
Sc03g0002980 Simmondsia chinensis HOM05D004251 ORTHO05D005010 7.3e-32 141.7 100 67.0
Hund13980 Selenicereus undatus HOM05D004251 ORTHO05D005010 2.8e-31 139.8 122 58.2
AL954U10020 Arabidopsis lyrata HOM05D004251 ORTHO05D005010 1.1e-30 137.9 85 80.0
Zm00001eb293990 Zea mays HOM05D004251 ORTHO05D005010 2.1e-26 123.6 151 48.3
A01p21670 Brassica napus HOM05D004251 ORTHO05D005010 1.3e-23 114.4 83 68.7
BraA01t02076Z Brassica rapa HOM05D004251 ORTHO05D005010 1.3e-23 114.4 83 68.7
Gohir.A02G165500 Gossypium hirsutum HOM05D004251 ORTHO05D005010 8.1e-23 111.7 79 69.6
Zm00001eb412790 Zea mays HOM05D004251 ORTHO05D005010 2.0e-21 107.1 152 43.4
Gohir.A02G165600 Gossypium hirsutum HOM05D004251 ORTHO05D005010 4.9e-20 102.4 79 60.8
SEGI_19545 Sequoiadendron giganteum HOM05D004251 ORTHO05D005010 2.7e-18 96.7 83 55.4
SEGI_32759 Sequoiadendron giganteum HOM05D004251 ORTHO05D005010 3.3e-16 89.7 79 53.2
Zm00001eb420900 Zea mays HOM05D004251 ORTHO05D015097 3.3e-08 63.2 39 76.9


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