Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0120700 Rhododendron simsii HOM05D011426 ORTHO05D011041 0.0e+00 1725.3 894 100.0
Rhsim05G0131400 Rhododendron simsii HOM05D011426 ORTHO05D011041 0.0e+00 1171.0 1035 65.0
Rhsim06G0095800 Rhododendron simsii HOM05D011426 ORTHO05D011041 0.0e+00 1095.5 916 67.9
Rhsim11G0142500 Rhododendron simsii HOM05D011426 ORTHO05D011041 0.0e+00 1087.8 847 71.9
Rhsim01G0005200 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.1e-306 1056.6 711 80.2
Rhsim12G0186600 Rhododendron simsii HOM05D011426 ORTHO05D011041 7.3e-247 857.8 633 75.5
Rhsim08G0133200 Rhododendron simsii HOM05D011426 ORTHO05D011041 4.6e-233 812.0 925 55.2
Rhsim01G0103900 Rhododendron simsii HOM05D011426 ORTHO05D011041 7.8e-100 369.4 623 41.3
RhsimUnG0238600 Rhododendron simsii HOM05D011426 ORTHO05D011041 3.3e-74 284.3 186 75.3
vmacro22169 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 4.3e-74 283.9 709 33.3
vmacro10800 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 6.5e-54 216.9 546 34.1
RhsimUnG0238400 Rhododendron simsii HOM05D011426 ORTHO05D011041 8.8e-51 206.5 246 53.7
RhsimUnG0238500 Rhododendron simsii HOM05D011426 ORTHO05D011041 3.7e-49 201.1 137 72.3
RhsimUnG0240000 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.0e-46 193.0 728 26.5
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 9.4e-45 186.4 281 37.0
Rhsim10G0108400 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.7e-44 184.9 566 27.2
RhsimUnG0114800 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.4e-40 171.8 475 28.8
Rhsim02G0074000 Rhododendron simsii HOM05D009719 ORTHO05D011041 5.2e-35 154.1 515 27.0
Rhsim07G0149500 Rhododendron simsii HOM05D009719 ORTHO05D011041 8.9e-27 126.7 195 38.5
Rhsim05G0103700 Rhododendron simsii HOM05D011426 ORTHO05D003768 6.3e-25 120.6 155 52.9
Rhsim12G0083800 Rhododendron simsii HOM05D009719 ORTHO05D011041 3.3e-21 108.2 141 40.4
Rhsim09G0059600 Rhododendron simsii HOM05D009719 ORTHO05D011041 4.7e-20 104.4 181 32.0
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 1.2e-18 99.8 277 26.4
Dinv02312 Davidia involucrata HOM05D007544 ORTHO05D009682 1.1e-16 93.2 563 22.7
Rhsim07G0089400 Rhododendron simsii HOM05D011426 ORTHO05D016548 4.6e-15 87.8 139 40.3
Dinv09698 Davidia involucrata HOM05D007544 ORTHO05D009682 5.6e-13 80.9 582 21.5
Rhsim01G0162700 Rhododendron simsii HOM05D009719 ORTHO05D011041 5.6e-13 80.9 135 34.8
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 7.3e-13 80.5 224 25.4
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 9.5e-13 80.1 224 25.9
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 2.1e-12 79.0 224 26.3
Rhsim12G0073400 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.1e-12 79.0 109 36.7
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 2.8e-12 78.6 214 25.7
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 2.8e-12 78.6 225 27.6
Dinv33528 Davidia involucrata HOM05D007544 ORTHO05D009682 4.7e-12 77.8 566 21.4
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 1.8e-11 75.9 224 25.4
Rhsim05G0098200 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.9e-11 73.6 79 40.5
Rhsim12G0034100 Rhododendron simsii HOM05D009719 ORTHO05D011041 4.4e-10 71.2 75 42.7
Rhsim12G0083900 Rhododendron simsii HOM05D009719 ORTHO05D011041 5.8e-10 70.9 480 20.8
Dinv28085 Davidia involucrata HOM05D007544 ORTHO05D009682 1.7e-09 69.3 209 25.8
Rhsim09G0072800 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.9e-09 68.6 161 25.5
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 3.7e-09 68.2 168 26.2
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 4.9e-09 67.8 166 25.9
AUR62016684 Chenopodium quinoa HOM05D000554 ORTHO05D002829 6.4e-09 67.4 164 26.2
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 1.1e-08 66.6 166 28.3
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 1.4e-08 66.2 176 28.4
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 1.9e-08 65.9 166 25.9
Rhsim02G0111600 Rhododendron simsii HOM05D009719 ORTHO05D011041 3.2e-08 65.1 68 42.6
CSS0031619 Camellia sinensis var. sinensis HOM05D011426 ORTHO05D011041 4.1e-08 64.7 58 46.6
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 5.4e-08 64.3 165 24.2
DCAR_005964 Daucus carota HOM05D008184 ORTHO05D010791 9.2e-08 63.5 160 26.9
DCAR_022699 Daucus carota HOM05D008184 ORTHO05D002997 9.2e-08 63.5 160 26.9
DCAR_005090 Daucus carota HOM05D002069 ORTHO05D002997 1.6e-07 62.8 163 27.6
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 1.6e-07 62.8 165 23.6
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 2.1e-07 62.4 169 24.3
DCAR_010562 Daucus carota HOM05D008184 ORTHO05D002997 2.7e-07 62.0 142 28.9
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 6.0e-07 60.8 158 22.8
Os02g0467500 Oryza sativa ssp. japonica HOM05D007651 ORTHO05D010881 6.0e-07 60.8 152 27.0
Rhsim09G0064000 Rhododendron simsii HOM05D009719 ORTHO05D011041 7.8e-07 60.5 99 34.3
AUR62035718 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.0e-06 58.5 168 25.6
AUR62035971 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.6e-06 57.4 171 27.5


User provided reference genes

Program Settings