Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0120600 Rhododendron simsii HOM05D000566 ORTHO05D004798 2.5e-110 402.1 206 100.0
Rhsim08G0228800 Rhododendron simsii HOM05D000566 ORTHO05D004798 3.4e-22 109.4 56 89.3
vmacro18840 Vaccinium macrocarpon HOM05D000566 ORTHO05D004798 8.6e-18 94.7 56 76.8
Actinidia32114 Actinidia chinensis HOM05D000566 ORTHO05D004798 2.6e-14 83.2 56 69.6
Actinidia21725 Actinidia chinensis HOM05D000566 ORTHO05D004798 2.9e-13 79.7 56 67.9
CSS0045532 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D004798 2.7e-11 73.2 64 57.8
CSS0004558 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D004798 1.0e-10 71.2 56 64.3
TAR383G0913 Trochodendron aralioides HOM05D000566 ORTHO05D004798 2.3e-10 70.1 65 53.8
Dinv30423 Davidia involucrata HOM05D000566 ORTHO05D004798 3.9e-10 69.3 50 62.0
Haze_15875 Corylus avellana HOM05D000566 ORTHO05D004798 3.3e-09 66.2 60 55.0
QL02p056177 Quercus lobata HOM05D000566 ORTHO05D004798 4.3e-09 65.9 44 68.2
QL05p018774 Quercus lobata HOM05D000566 ORTHO05D004798 4.3e-09 65.9 44 68.2
Nitab4.5_0000300g0150 Nicotiana tabacum HOM05D000566 ORTHO05D004798 2.8e-08 63.2 56 58.9
Cfa003628 Carpinus fangiana HOM05D000566 ORTHO05D004798 3.6e-08 62.8 73 46.6
Cfa003630 Carpinus fangiana HOM05D000566 ORTHO05D004798 3.6e-08 62.8 61 52.5
TAR626G1832 Trochodendron aralioides HOM05D000566 ORTHO05D004798 1.1e-07 61.2 57 56.1
Nitab4.5_0001991g0050 Nicotiana tabacum HOM05D000566 ORTHO05D004798 1.8e-07 60.5 56 55.4
Peaxi162Scf00207g01129 Petunia axillaris HOM05D000566 ORTHO05D004798 1.8e-07 60.5 53 58.5
Sabra03G0019300 Salix brachista HOM05D000566 ORTHO05D004798 1.8e-07 60.5 86 40.7
TAR626G0104 Trochodendron aralioides HOM05D000566 ORTHO05D004798 4.0e-07 59.3 57 54.4
Haze_15871 Corylus avellana HOM05D000566 ORTHO05D004798 5.2e-07 58.9 60 50.0
Potri.003G047200 Populus trichocarpa HOM05D000566 ORTHO05D004798 5.2e-07 58.9 85 38.8
Lj9A515T34 Lonicera japonica HOM05D000566 ORTHO05D004798 6.8e-07 58.5 46 60.9
Cc04_g02420 Coffea canephora HOM05D000566 ORTHO05D004798 8.9e-07 58.2 39 66.7
Dinv37962 Davidia involucrata HOM05D000566 ORTHO05D004798 8.9e-07 58.2 40 62.5
Cpa.g.sc3163.1 Carica papaya HOM05D000566 ORTHO05D004798 1.2e-06 57.8 56 48.2
MELO3C024431.2 Cucumis melo HOM05D000566 ORTHO05D004798 1.2e-06 57.8 85 36.5
Eucgr.F03088 Eucalyptus grandis HOM05D000566 ORTHO05D004798 1.5e-06 57.4 50 52.0
Nn8g39005 Nelumbo nucifera HOM05D000566 ORTHO05D004798 2.0e-06 57.0 58 51.7
CiPaw.01G229800 Carya illinoinensis HOM05D000566 ORTHO05D004798 2.6e-06 56.6 85 41.2
ClCG09G000280 Citrullus lanatus HOM05D000566 ORTHO05D004798 7.5e-06 55.1 87 35.6


User provided reference genes

Program Settings