Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0119400 Rhododendron simsii HOM05D008581 ORTHO05D009966 1.4e-66 256.1 129 100.0
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 8.8e-29 130.6 129 55.8
Hma1.2p1_0200F.1_g086080 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 2.0e-20 102.8 131 48.1
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 1.2e-17 93.6 131 45.8
Hma1.2p1_1415F.1_g282020 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 1.3e-16 90.1 134 44.0
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 1.1e-15 87.0 130 45.4
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 3.3e-15 85.5 132 42.4
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 7.3e-15 84.3 132 43.2
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 9.5e-15 84.0 133 42.1
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 3.6e-14 82.0 133 41.4
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 2.6e-12 75.9 130 41.5
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 3.4e-12 75.5 129 41.1
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 4.4e-12 75.1 130 40.8
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 7.5e-12 74.3 132 40.2
Peaxi162Scf00916g00007 Petunia axillaris HOM05D012691 ORTHO05D009966 1.7e-11 73.2 127 39.4
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 1.7e-11 73.2 129 38.8
Lj7C67T3 Lonicera japonica HOM05D008581 ORTHO05D009966 3.7e-11 72.0 132 37.9
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 8.3e-11 70.9 131 42.0
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 1.1e-10 70.5 130 42.3
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 1.1e-10 70.5 129 39.5
Nitab4.5_0000310g0110 Nicotiana tabacum HOM05D012691 ORTHO05D009966 5.4e-10 68.2 129 35.7
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 7.0e-10 67.8 130 39.2
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 9.2e-10 67.4 129 40.3
Nitab4.5_0013032g0010 Nicotiana tabacum HOM05D012691 ORTHO05D009966 1.2e-09 67.0 129 34.1
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 1.6e-09 66.6 130 39.2
Lj7C64T0 Lonicera japonica HOM05D008581 ORTHO05D009966 2.0e-09 66.2 124 37.9
Nitab4.5_0000033g0450 Nicotiana tabacum HOM05D012691 ORTHO05D009966 3.5e-09 65.5 129 34.1
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 7.8e-09 64.3 130 36.9
Eucgr.I00949 Eucalyptus grandis HOM05D022674 ORTHO05D009966 1.3e-08 63.5 134 35.8
Eucgr.I00950 Eucalyptus grandis HOM05D022674 ORTHO05D009966 3.0e-08 62.4 134 34.3
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 6.6e-08 61.2 131 36.6
Duzib264G0396 Durio zibethinus HOM05D013202 ORTHO05D009966 8.6e-08 60.8 44 65.9
Lalb_Chr05g0213241 Lupinus albus HOM05D008581 ORTHO05D011864 2.5e-07 59.3 133 39.8
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 5.6e-07 58.2 43 72.1
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 5.6e-07 58.2 43 72.1
Duzib264G0703 Durio zibethinus HOM05D008581 ORTHO05D009966 1.2e-06 57.0 129 34.9
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.2e-06 57.0 69 52.2
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.2e-06 57.0 69 52.2
Nitab4.5_0001064g0010 Nicotiana tabacum HOM05D012691 ORTHO05D009966 1.2e-06 57.0 129 32.6
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.6e-06 56.6 63 54.0
CiPaw.01G021000 Carya illinoinensis HOM05D015383 ORTHO05D009966 2.1e-06 56.2 127 33.9
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 2.1e-06 56.2 63 52.4
Rhsim08G0101900 Rhododendron simsii HOM05D008581 ORTHO05D338442 2.1e-06 56.2 99 41.4
CiPaw.01G020500 Carya illinoinensis HOM05D015383 ORTHO05D009966 2.8e-06 55.8 133 35.3
Oeu050767.1 Olea europaea HOM05D028002 ORTHO05D009966 2.8e-06 55.8 125 29.6
Dinv16315 Davidia involucrata HOM05D008581 ORTHO05D009966 3.6e-06 55.5 35 68.6
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 3.6e-06 55.5 63 52.4
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 3.6e-06 55.5 69 52.2
CiPaw.01G020900 Carya illinoinensis HOM05D015383 ORTHO05D009966 4.7e-06 55.1 123 32.5
Eucgr.F04318 Eucalyptus grandis HOM05D022674 ORTHO05D009966 4.7e-06 55.1 133 33.8
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 4.7e-06 55.1 131 35.9
Eucgr.I00948 Eucalyptus grandis HOM05D022674 ORTHO05D009966 8.1e-06 54.3 133 33.8


User provided reference genes

Program Settings