Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 0.0e+00 1190.3 593 100.0
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.2e-165 587.4 726 50.3
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-160 570.5 560 57.9
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.4e-159 564.7 560 57.1
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.9e-110 404.1 361 59.6
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.0e-103 379.4 379 55.7
Rhsim08G0155200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-96 357.1 379 55.1
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 2.8e-77 293.9 719 31.4
Rhsim09G0046000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-71 274.2 342 48.5
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.5e-56 223.8 205 49.8
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.0e-47 195.7 207 46.4
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-46 191.8 206 46.6
Rhsim13G0135500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-46 191.8 330 38.8
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-36 156.4 198 36.4
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.8e-34 150.6 208 34.1
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-33 148.7 205 34.1
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-32 143.7 208 33.2
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-32 143.7 208 33.2
Rhsim03G0174200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-31 142.5 308 35.1
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.0e-30 138.3 621 22.9
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 9.7e-30 136.0 201 31.3
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.7e-30 136.0 206 30.6
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-29 135.6 207 32.9
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.2e-29 134.8 207 30.9
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.7e-29 134.0 207 33.8
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.8e-29 133.7 207 32.9
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.8e-29 133.7 207 33.8
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-28 131.7 207 33.3
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.3e-28 130.2 197 33.5
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.3e-28 130.2 197 33.5
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-28 129.8 197 33.5
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.1e-28 129.4 207 32.9
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-27 129.0 229 31.4
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-27 128.6 212 29.7
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-27 128.6 197 33.5
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.5e-27 128.6 193 33.7
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-27 128.3 206 34.0
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.4e-27 127.5 634 22.4
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.9e-27 126.7 197 33.0
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.7e-27 126.3 227 29.1
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.9e-26 124.4 193 32.6
Rhsim03G0108200 Rhododendron simsii HOM05D008484 ORTHO05D007523 3.8e-26 124.0 287 31.0
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.8e-26 124.0 227 28.6
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.5e-26 123.2 197 32.5
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 2.5e-25 121.3 206 28.6
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 7.2e-25 119.8 655 22.6
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.6e-24 118.6 649 23.3
Rhsim13G0177800 Rhododendron simsii HOM05D008484 ORTHO05D007523 1.6e-24 118.6 275 32.0
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.0e-23 115.9 645 22.9
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 2.0e-22 111.7 157 34.4
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.4e-22 110.5 595 21.2
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.4e-22 109.8 531 25.4
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.3e-21 109.0 233 29.6
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-21 108.6 595 20.7
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-20 105.1 427 23.7
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-20 105.1 160 33.8
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.1e-20 104.4 203 28.1
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 4.1e-20 104.0 220 28.6
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.0e-20 103.2 165 32.7
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 2.0e-19 101.7 206 28.6
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-18 99.4 163 33.1
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.3e-18 99.0 173 31.8
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.3e-18 99.0 164 27.4
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.9e-18 97.8 153 30.7
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.9e-18 97.8 160 31.9
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 6.5e-18 96.7 198 26.8
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.5e-17 95.5 206 27.7
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.2e-17 94.0 187 30.5
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.2e-17 94.0 394 21.8
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.5e-17 93.6 221 28.1
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.5e-17 93.6 254 26.8
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.5e-17 93.6 221 28.1
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 7.2e-17 93.2 153 29.4
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.2e-16 92.4 221 28.1
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.7e-16 91.3 552 21.2
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 4.7e-16 90.5 147 32.0
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.1e-16 90.1 555 22.3
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.4e-15 89.0 147 31.3
RhsimUnG0016200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-15 88.6 102 34.3
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-15 88.2 123 35.0
MD05G1170800 Malus domestica HOM05D023633 ORTHO05D001590 3.9e-15 87.4 219 26.9
FvH4_3g31130 Fragaria vesca HOM05D001313 ORTHO05D001590 5.2e-15 87.0 213 27.2
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.7e-15 86.7 625 19.5
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.7e-15 86.7 196 27.0
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 8.8e-15 86.3 195 27.2
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 1.1e-14 85.9 215 25.6
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.5e-14 85.5 192 27.1
CSS0013522 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.0e-14 85.1 163 26.4
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 2.6e-14 84.7 192 27.1
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.6e-14 84.7 192 27.1
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 3.3e-14 84.3 205 24.4
FvH4_2g01890 Fragaria vesca HOM05D001313 ORTHO05D001590 5.7e-14 83.6 214 26.2
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-13 82.0 177 28.2
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.8e-13 81.3 177 28.2
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.8e-13 81.3 177 28.2
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.8e-13 81.3 177 28.2
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.8e-13 81.3 177 28.2
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 3.7e-13 80.9 201 24.9
vmacro19840 Vaccinium macrocarpon HOM05D007376 ORTHO05D018824 3.7e-13 80.9 82 43.9
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.3e-13 80.1 155 28.4
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.3e-13 80.1 155 28.4
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 8.2e-13 79.7 184 29.9
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.1e-12 79.3 210 27.1
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.4e-12 79.0 177 27.7
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-12 79.0 428 22.4
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-12 78.2 177 28.2
vmacro21208 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 4.1e-12 77.4 160 31.9
vmacro00448 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 5.3e-12 77.0 175 29.7
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 7.0e-12 76.6 540 19.8
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.0e-12 76.6 113 34.5
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.6e-11 75.5 130 27.7
FvH4_5g24921 Fragaria vesca HOM05D001313 ORTHO05D001590 1.6e-11 75.5 210 24.8
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 2.0e-11 75.1 204 22.1
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.5e-11 74.3 211 22.3
MD05G1071400 Malus domestica HOM05D001313 ORTHO05D001590 3.5e-11 74.3 214 24.3
Rhsim07G0128100 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.5e-11 73.9 124 31.5
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 4.5e-11 73.9 283 20.8
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 4.5e-11 73.9 283 20.8
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 3.8e-10 70.9 546 18.5
Rhsim08G0172300 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.0e-10 70.5 127 28.3
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 8.5e-10 69.7 160 28.1
FAN12G1208 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-09 69.3 202 25.7
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 1.5e-09 68.9 539 19.5
vmacro04432 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.5e-09 68.9 160 30.0
vmacro22682 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.9e-09 68.6 136 33.1
MD10G1053600 Malus domestica HOM05D023633 ORTHO05D001590 3.2e-09 67.8 218 22.5
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 9.4e-09 66.2 129 31.0
Rhsim01G0083900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-08 65.1 259 26.3
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 4.7e-08 63.9 204 26.0
FAN18G1148 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.0e-07 62.8 203 23.6
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 1.8e-07 62.0 547 20.5
Sabra05G0039100 Salix brachista HOM05D007376 ORTHO05D001969 3.0e-07 61.2 166 28.9
CSS0042152 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 8.8e-07 59.7 205 19.0
CSS0008269 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109135 1.5e-06 58.9 104 36.5
FvH4_3g44640 Fragaria vesca HOM05D001313 ORTHO05D001590 2.0e-06 58.5 192 21.9
FAN04G0718 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.4e-06 57.8 191 23.6
RhsimUnG0169600 Rhododendron simsii HOM05D017361 ORTHO05D001590 4.4e-06 57.4 55 40.0


User provided reference genes

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