Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0071500 Rhododendron simsii HOM05D000329 ORTHO05D005330 7.5e-158 560.5 281 100.0
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 1.4e-103 380.2 409 55.7
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 4.2e-100 368.6 385 54.0
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 4.2e-100 368.6 385 54.0
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 5.5e-100 368.2 379 55.4
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 4.1e-95 352.1 379 53.6
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 1.2e-86 323.9 373 49.6
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 1.6e-83 313.5 379 49.3
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 1.0e-82 310.8 379 47.8
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 4.0e-82 308.9 379 47.2
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 3.3e-81 305.8 379 46.4
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 1.3e-80 303.9 376 47.1
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 2.8e-80 302.8 379 47.8
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.4e-79 300.4 379 46.7
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 1.2e-78 297.4 379 46.7
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 2.7e-78 296.2 379 46.2
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 3.5e-78 295.8 379 46.4
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 5.9e-78 295.0 385 45.5
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 5.9e-78 295.0 283 55.1
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 7.7e-78 294.7 379 46.7
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 2.2e-77 293.1 379 46.2
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 2.9e-77 292.7 379 48.3
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 5.0e-77 292.0 381 45.4
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 5.0e-77 292.0 377 45.4
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 1.5e-76 290.4 377 45.6
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 3.2e-76 289.3 380 44.2
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 3.2e-76 289.3 380 44.5
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 1.2e-75 287.3 381 46.2
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 4.7e-75 285.4 378 44.4
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 8.0e-75 284.6 283 54.4
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 1.4e-74 283.9 391 44.0
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 2.3e-74 283.1 378 44.4
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 3.0e-74 282.7 380 46.1
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 5.2e-74 282.0 378 43.7
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 6.8e-74 281.6 283 55.1
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 1.2e-73 280.8 390 45.9
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 2.0e-73 280.0 379 46.2
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 2.6e-73 279.6 380 45.8
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 3.4e-73 279.3 280 53.2
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 9.8e-73 277.7 379 44.1
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 2.8e-72 276.2 379 44.9
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 6.3e-72 275.0 379 44.3
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 8.3e-72 274.6 379 44.1
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 1.8e-71 273.5 280 50.0
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 2.4e-71 273.1 379 44.3
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 3.1e-71 272.7 387 43.2
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 4.1e-71 272.3 403 41.2
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 9.1e-71 271.2 379 44.3
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 2.7e-70 269.6 366 45.6
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 2.7e-70 269.6 379 44.1
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 2.7e-70 269.6 414 40.8
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 4.5e-70 268.9 281 54.1
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 5.9e-70 268.5 364 45.6
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 5.9e-70 268.5 379 44.3
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 7.7e-70 268.1 390 44.9
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 7.7e-70 268.1 283 52.3
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 2.9e-69 266.2 280 49.6
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 1.1e-68 264.2 381 43.8
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 1.5e-68 263.8 364 45.6
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 1.9e-68 263.5 283 52.7
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 4.2e-68 262.3 390 43.8
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 5.5e-68 261.9 387 41.3
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 1.2e-67 260.8 387 41.9
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 1.6e-67 260.4 283 53.0
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 2.1e-67 260.0 387 41.9
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 2.1e-67 260.0 281 53.4
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 2.8e-67 259.6 283 53.0
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 4.7e-67 258.8 379 42.5
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 6.1e-67 258.5 387 41.6
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 6.1e-67 258.5 387 41.6
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 5.2e-66 255.4 387 41.1
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 2.0e-65 253.4 387 41.1
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.0e-65 253.4 397 42.1
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.0e-65 253.4 397 42.1
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 3.4e-65 252.7 405 39.8
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 5.7e-65 251.9 397 41.8
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 1.3e-64 250.8 379 40.9
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 1.7e-64 250.4 400 40.0
Cpa.g.sc162.43 Carica papaya HOM05D000329 ORTHO05D005330 1.7e-64 250.4 322 45.3
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 2.8e-64 249.6 387 39.8
DCAR_000979 Daucus carota HOM05D000329 ORTHO05D005330 4.5e-62 242.3 392 41.1
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 3.8e-61 239.2 357 41.7
Nitab4.5_0000432g0100 Nicotiana tabacum HOM05D000329 ORTHO05D005330 6.6e-61 238.4 279 48.7
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 1.8e-58 230.3 269 48.3
Haze_04431 Corylus avellana HOM05D000329 ORTHO05D005330 1.4e-55 220.7 175 66.3
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 2.0e-54 216.9 287 46.0
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.3e-53 214.2 368 39.9
Hma1.2p1_3491F.1_g336380 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 2.8e-51 206.5 178 60.7
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 8.9e-50 201.4 272 46.7
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 8.9e-50 201.4 175 62.9
Nitab4.5_0003285g0070 Nicotiana tabacum HOM05D000329 ORTHO05D005330 2.9e-48 196.4 222 51.8
ClCG06G009480 Citrullus lanatus HOM05D000329 ORTHO05D005330 1.6e-46 190.7 177 62.1
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 1.2e-43 181.0 292 37.7
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 3.6e-43 179.5 279 38.0
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 2.0e-41 173.7 287 36.9
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 9.9e-41 171.4 139 67.6
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 2.9e-40 169.9 293 35.5
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 3.7e-40 169.5 314 35.7
CDE08G1167 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 2.7e-38 163.3 275 38.2
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 1.7e-37 160.6 130 68.5
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 2.0e-33 147.1 211 39.8
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 1.4e-31 141.0 176 45.5
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 1.4e-31 141.0 176 45.5
Rhsim05G0128300 Rhododendron simsii HOM05D000329 ORTHO05D005330 9.2e-31 138.3 137 62.0
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.0e-29 134.8 175 43.4
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 4.4e-25 119.4 363 28.4
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 5.1e-21 105.9 291 29.2
Hma1.2p1_3491F.1_g336370 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 1.9e-20 104.0 171 37.4
SHI23201 Sapria himalayana HOM05D000329 ORTHO05D005330 1.2e-17 94.7 87 55.2
Haze_04430 Corylus avellana HOM05D000329 ORTHO05D005330 8.4e-16 88.6 75 54.7
QL04p089247 Quercus lobata HOM05D000176 ORTHO05D000106 3.9e-13 79.7 72 51.4
QL05p031734 Quercus lobata HOM05D000176 ORTHO05D000106 3.9e-13 79.7 72 51.4
QL93p0164_0019 Quercus lobata HOM05D000329 ORTHO05D005330 3.9e-13 79.7 72 51.4
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 5.1e-13 79.3 261 26.8
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 1.5e-12 77.8 65 60.0
ClCG06G009470 Citrullus lanatus HOM05D000329 ORTHO05D005330 7.4e-12 75.5 75 54.7
Oeu044815.2 Olea europaea HOM05D002525 ORTHO05D002727 2.2e-08 63.9 42 64.3


User provided reference genes

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