Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0054300 Rhododendron simsii HOM05D028943 ORTHO05D000004 8.0e-114 413.7 197 100.0
Rhsim02G0101400 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.5e-35 152.9 178 44.9
Rhsim11G0018500 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.3e-27 125.6 115 55.7
CSS0007419 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.1e-25 117.9 187 34.8
CSS0037039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.5e-23 111.3 187 33.7
CSS0039671 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-21 107.1 196 31.6
Rhsim10G0042600 Rhododendron simsii HOM05D028943 ORTHO05D025775 3.9e-20 102.4 127 41.7
MBI14_g15700_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.7e-20 101.7 186 31.7
CSS0006402 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-18 96.7 185 29.7
Rhsim12G0011300 Rhododendron simsii HOM05D028943 ORTHO05D000004 4.8e-18 95.5 78 55.1
MBI05_g11580_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.3e-18 95.1 186 30.6
CSS0011659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.2e-18 94.7 157 35.0
Aqoxy1G02399 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-16 90.5 187 31.0
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 2.6e-16 89.7 150 34.7
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 2.6e-16 89.7 188 29.8
Rhsim11G0108600 Rhododendron simsii HOM05D028943 ORTHO05D000004 5.9e-16 88.6 105 47.6
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.7e-16 88.2 187 29.4
Aqoxy4G01530 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-15 87.4 171 31.0
MBI01_g39982_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.7e-15 87.0 153 32.0
MBI02_g23961_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.7e-15 87.0 188 30.3
CSS0030341 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-15 86.3 125 37.6
Rhsim09G0017900 Rhododendron simsii HOM05D003063 ORTHO05D003242 2.9e-15 86.3 177 29.9
MBI02_g21885_MAGBIO Magnolia biondii HOM05D003439 ORTHO05D004062 6.5e-15 85.1 188 28.2
CSS0029089 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.5e-15 84.7 150 35.3
MBI16_g27832_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.1e-14 84.3 186 30.1
MBI15_g00074_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.5e-14 84.0 185 29.7
Aqoxy1G02855 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.2e-14 82.4 170 30.6
Hund22312 Selenicereus undatus HOM05D000003 ORTHO05D000004 5.5e-14 82.0 151 32.5
PGSC0003DMG400014363 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.5e-14 82.0 187 27.8
Aqoxy2G01460 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.4e-14 81.3 158 30.4
CSS0002270 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.4e-14 81.3 100 41.0
TWI39G0070 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 1.2e-13 80.9 196 29.1
Atru.chr11.2510 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-13 79.7 163 31.3
Actinidia03486 Actinidia chinensis HOM05D000028 ORTHO05D000296 2.7e-13 79.7 142 33.8
CSS0028483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.1e-13 78.6 193 30.1
PGSC0003DMG400016171 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.3e-12 76.6 159 31.4
Atru.chr4.2622 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-12 76.3 161 29.2
Aqoxy2G01404 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.0e-12 76.3 184 26.6
CSS0022591 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-12 76.3 191 27.7
QL01p048042 Quercus lobata HOM05D001672 ORTHO05D000004 3.0e-12 76.3 154 35.7
PGSC0003DMG400013069 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.0e-12 76.3 162 34.0
Ah.06g185410 Amaranthus hybridus HOM05D000003 ORTHO05D000004 3.9e-12 75.9 188 27.1
Aqoxy4G01140 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.9e-12 75.9 139 33.8
MBI06_g15030_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.9e-12 75.9 183 27.3
TPR.G32089 Trifolium pratense HOM05D000003 ORTHO05D000004 3.9e-12 75.9 190 27.4
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.2e-12 75.5 98 34.7
MBI06_g35598_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.2e-12 75.5 183 27.9
arahy.Tifrunner.gnm1.ann1.8AAX84 Arachis hypogaea HOM05D000003 ORTHO05D000004 6.7e-12 75.1 168 28.0
MBI01_g01229_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D000004 6.7e-12 75.1 181 26.0
MBI14_g23589_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.7e-12 75.1 102 39.2
PGSC0003DMG400024990 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.7e-12 75.1 157 31.8
CSS0021010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-11 74.3 114 35.1
MBI05_g04110_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.1e-11 74.3 170 28.2
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.5e-11 73.9 167 28.7
PSO675G4334 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-11 73.6 159 31.4
PGSC0003DMG400013620 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.0e-11 73.6 155 31.0
CSS0008549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-11 73.2 159 28.3
Aqoxy6G02329 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.7e-11 72.0 186 29.0
CSS0034649 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 5.7e-11 72.0 104 38.5
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 5.7e-11 72.0 162 32.7
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 7.4e-11 71.6 163 28.2
CSS0014831 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.4e-11 71.6 190 25.3
Potri.018G042350 Populus trichocarpa HOM05D000003 ORTHO05D000004 7.4e-11 71.6 190 29.5
QL02p038629 Quercus lobata HOM05D000003 ORTHO05D000004 7.4e-11 71.6 158 33.5
MBI11_g37079_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.7e-11 71.2 184 27.2
Rhsim01G0162300 Rhododendron simsii HOM05D010927 ORTHO05D000004 9.7e-11 71.2 106 34.9
Hund22285 Selenicereus undatus HOM05D000003 ORTHO05D000004 9.7e-11 71.2 134 32.1
MBI14_g10150_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.3e-10 70.9 160 31.9
ECA246G2574 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.7e-10 70.5 187 29.9
PSO832G3948 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-10 70.5 158 28.5
Atru.chr12.2307 Acer truncatum HOM05D000003 ORTHO05D002259 2.2e-10 70.1 164 28.7
Aqoxy5G03103 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.2e-10 70.1 168 32.1
CSS0000416 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-10 70.1 159 29.6
Atru.chr10.984 Acer truncatum HOM05D000502 ORTHO05D002259 2.8e-10 69.7 135 30.4
Atru.chr4.1942 Acer truncatum HOM05D000003 ORTHO05D000004 2.8e-10 69.7 159 27.0
PGSC0003DMG400006509 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.7e-10 69.3 150 28.7
TAR476G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000004 3.7e-10 69.3 177 31.1
Aqoxy6G01974 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.8e-10 68.9 188 26.1
CSS0008056 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.8e-10 68.9 113 31.9
ECA233G1266 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.8e-10 68.9 187 29.9
Hund22310 Selenicereus undatus HOM05D000003 ORTHO05D000004 4.8e-10 68.9 174 29.3
GSVIVG01004123001 Vitis vinifera HOM05D000003 ORTHO05D000004 4.8e-10 68.9 137 34.3
Atru.chr10.61 Acer truncatum HOM05D000003 ORTHO05D000004 6.3e-10 68.6 156 28.8
Atru.chr1.3579 Acer truncatum HOM05D000003 ORTHO05D000004 8.2e-10 68.2 155 29.0
Atru.chr2.3564 Acer truncatum HOM05D000003 ORTHO05D000004 8.2e-10 68.2 157 28.0
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 8.2e-10 68.2 162 30.2
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 8.2e-10 68.2 162 30.2
Hund23992 Selenicereus undatus HOM05D000003 ORTHO05D000004 8.2e-10 68.2 132 31.8
PSO675G2763 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-09 67.8 101 40.6
CSS0031349 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-09 67.4 112 36.6
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-09 67.0 162 27.8
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-09 67.0 167 31.7
ECA240G0599 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.8e-09 67.0 180 31.1
Oeu045954.1 Olea europaea HOM05D000003 ORTHO05D000004 1.8e-09 67.0 155 32.3
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.4e-09 66.6 98 32.7
MBI03_g28951_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D007142 2.4e-09 66.6 105 35.2
PGSC0003DMG400027303 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.4e-09 66.6 189 26.5
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-09 66.2 157 26.1
PSO724G0020 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-09 66.2 159 25.2
Atru.chr2.1999 Acer truncatum HOM05D000003 ORTHO05D002259 4.1e-09 65.9 159 28.9
Aqoxy5G04099 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.1e-09 65.9 168 32.7
CSS0028288 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.1e-09 65.9 119 32.8
HanXRQChr05g0162321 Helianthus annuus HOM05D000003 ORTHO05D000004 4.1e-09 65.9 182 29.7
HanXRQChr11g0345661 Helianthus annuus HOM05D000003 ORTHO05D000004 4.1e-09 65.9 182 29.7
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 4.1e-09 65.9 182 29.7
MBI14_g44728_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.3e-09 65.5 158 31.0
PSO339G6332 Papaver somniferum HOM05D000003 ORTHO05D000004 5.3e-09 65.5 164 29.3
Medtr4g064813 Medicago truncatula HOM05D002507 ORTHO05D015714 9.1e-09 64.7 122 32.0
Hund04195 Selenicereus undatus HOM05D000877 ORTHO05D000004 9.1e-09 64.7 125 31.2
Cpa.g.sc23.130 Carica papaya HOM05D000003 ORTHO05D000004 1.2e-08 64.3 168 32.1
MBI18_g01966_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.2e-08 64.3 186 26.3
QL02p037654 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-08 64.3 169 30.2
GSVIVG01003937001 Vitis vinifera HOM05D000003 ORTHO05D000004 1.6e-08 63.9 147 30.6
MBI10_g47168_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.0e-08 63.5 103 35.9
MBI14_g42848_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.5e-08 62.8 103 32.0
Prupe.1G572100 Prunus persica HOM05D000003 ORTHO05D000004 3.5e-08 62.8 139 29.5
ECA232G4857 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.5e-08 62.4 185 26.5
TPR.G40382 Trifolium pratense HOM05D000003 ORTHO05D000004 4.5e-08 62.4 103 37.9
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 4.5e-08 62.4 86 36.0
arahy.Tifrunner.gnm1.ann1.K9ADIX Arachis hypogaea HOM05D000003 ORTHO05D000004 5.9e-08 62.0 191 30.4
Aqoxy3G02928 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.7e-08 61.6 105 34.3
Medtr8g037280 Medicago truncatula HOM05D000003 ORTHO05D000004 7.7e-08 61.6 180 30.6
Atru.chr3.2341 Acer truncatum HOM05D000003 ORTHO05D002259 1.0e-07 61.2 130 30.0
SHI14108 Sapria himalayana HOM05D002164 ORTHO05D000004 1.0e-07 61.2 162 29.0
Cpa.g.sc3.188 Carica papaya HOM05D003018 ORTHO05D003402 1.3e-07 60.8 129 31.0
Medtr3g093740 Medicago truncatula HOM05D002545 ORTHO05D002335 1.3e-07 60.8 125 32.0
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 1.3e-07 60.8 152 30.9
vmacro20784 Vaccinium macrocarpon HOM05D010927 ORTHO05D000004 1.3e-07 60.8 131 27.5
Cpa.g.sc73.80 Carica papaya HOM05D000003 ORTHO05D000004 1.7e-07 60.5 104 33.7
COL.COLO4_36939 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.7e-07 60.5 105 33.3
PGSC0003DMG402011647 Solanum tuberosum HOM05D002779 ORTHO05D003074 2.2e-07 60.1 188 26.1
Atru.chr11.1073 Acer truncatum HOM05D000003 ORTHO05D002259 2.9e-07 59.7 134 27.6
CSS0003615 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-07 59.7 191 26.2
Sopen11g018640 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-07 59.7 132 32.6
TPR.G40225 Trifolium pratense HOM05D000003 ORTHO05D000004 2.9e-07 59.7 168 27.4
Aqoxy6G02512 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.8e-07 59.3 105 32.4
Aqoxy6G02493 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.0e-07 58.9 105 32.4
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 5.0e-07 58.9 60 43.3
MBI14_g22160_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.0e-07 58.9 106 34.0
PSO302G0219 Papaver somniferum HOM05D000003 ORTHO05D000004 8.5e-07 58.2 161 28.0
Rhsim01G0163900 Rhododendron simsii HOM05D010927 ORTHO05D000004 8.5e-07 58.2 97 35.1
Aqoxy3G01498 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.1e-06 57.8 86 33.7
PSO596G0036 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-06 57.4 181 25.4
ECA232G4463 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-06 57.0 153 26.8
Medtr5g095580 Medicago truncatula HOM05D002545 ORTHO05D002335 2.5e-06 56.6 144 31.2
Atru.chr6.1028 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-06 56.2 146 28.8
CSS0026307 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-06 56.2 137 29.2
Aqoxy5G03258 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.2e-06 55.8 83 36.1
LjContig00081g0021034 Lotus japonicus HOM05D002545 ORTHO05D002335 5.5e-06 55.5 112 33.0
PSO478G2030 Papaver somniferum HOM05D000003 ORTHO05D000004 7.2e-06 55.1 156 28.8
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 7.2e-06 55.1 141 28.4
Cpa.g.sc170.10 Carica papaya HOM05D000003 ORTHO05D000004 9.4e-06 54.7 129 27.1
ECA246G3864 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.4e-06 54.7 189 24.9


User provided reference genes

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