Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 7.9e-269 929.9 472 100.0
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.6e-267 924.9 472 97.9
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 4.9e-234 814.3 474 88.8
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 9.8e-227 790.0 479 86.0
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.0e-224 782.3 474 85.4
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.7e-224 781.9 474 85.2
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.4e-220 769.6 472 83.9
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 1.5e-219 766.1 473 84.6
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 4.4e-219 764.6 472 82.0
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 8.3e-218 760.4 472 82.2
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 5.4e-217 757.7 472 81.1
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 7.1e-217 757.3 472 80.7
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 2.1e-216 755.7 475 82.1
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 2.7e-216 755.4 474 81.6
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 2.3e-215 752.3 473 81.4
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 3.9e-215 751.5 479 80.6
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 8.6e-215 750.4 475 80.4
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 1.9e-214 749.2 488 77.3
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.9e-214 749.2 474 81.4
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 9.5e-214 746.9 473 80.8
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 1.2e-213 746.5 479 79.5
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 2.1e-213 745.7 473 80.1
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 3.6e-213 745.0 474 80.4
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 2.4e-212 742.3 473 78.9
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 4.0e-212 741.5 473 79.7
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 6.8e-212 740.7 472 80.7
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 6.8e-212 740.7 472 79.2
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 5.8e-211 737.6 473 80.1
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 9.9e-211 736.9 473 79.7
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 1.7e-210 736.1 473 80.1
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.7e-210 736.1 472 79.0
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 2.9e-210 735.3 472 79.0
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 6.4e-210 734.2 472 78.8
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 8.4e-210 733.8 474 78.5
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 8.4e-210 733.8 472 79.4
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.4e-209 733.0 520 75.4
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.4e-209 733.0 472 78.0
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.4e-209 733.0 478 77.0
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 1.9e-209 732.6 472 78.6
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 4.1e-209 731.5 476 79.4
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 9.2e-209 730.3 472 77.8
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 2.1e-208 729.2 470 78.5
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 2.7e-208 728.8 490 78.4
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 6.0e-208 727.6 476 77.5
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 7.8e-208 727.2 471 78.3
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 1.3e-207 726.5 472 78.4
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 5.1e-207 724.5 472 78.0
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 8.7e-207 723.8 476 77.1
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 1.1e-206 723.4 474 76.8
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 1.1e-206 723.4 473 79.3
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 2.5e-206 722.2 479 78.7
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 3.3e-206 721.8 472 77.1
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 9.6e-206 720.3 466 77.9
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.2e-205 719.9 478 76.2
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 1.6e-205 719.5 473 77.6
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 2.8e-205 718.8 479 78.5
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 2.8e-205 718.8 478 75.9
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 2.6e-203 712.2 445 80.7
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 3.4e-203 711.8 471 76.6
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 2.2e-202 709.1 477 76.1
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 2.2e-202 709.1 445 80.2
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 8.4e-202 707.2 468 77.1
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 1.4e-201 706.4 405 84.7
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 4.2e-201 704.9 470 76.0
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 7.1e-201 704.1 469 76.1
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 9.3e-201 703.7 473 75.9
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 1.6e-200 703.0 404 84.9
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 2.7e-200 702.2 474 76.8
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 7.8e-200 700.7 474 75.3
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 7.8e-200 700.7 473 75.7
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 2.3e-199 699.1 473 75.5
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 3.9e-199 698.4 477 75.1
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 6.6e-199 697.6 470 76.0
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 1.1e-198 696.8 470 75.7
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 1.5e-198 696.4 452 79.2
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 5.3e-196 688.0 473 75.7
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 2.0e-195 686.0 475 76.2
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 1.7e-194 682.9 470 77.9
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 2.9e-194 682.2 404 83.4
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 4.9e-194 681.4 485 74.4
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 6.4e-194 681.0 401 82.3
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 1.6e-192 676.4 478 72.0
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 2.7e-192 675.6 480 73.8
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 2.7e-192 675.6 380 88.2
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.5e-190 669.8 478 73.4
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 6.2e-189 664.5 473 73.2
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.4e-187 658.7 375 87.7
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 6.7e-183 644.4 470 71.1
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 1.6e-181 639.8 388 82.2
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 3.0e-175 619.0 350 87.7
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 1.8e-172 609.8 398 74.4
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.1e-166 590.5 350 82.9
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 1.2e-163 580.5 373 79.1
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.1e-161 573.9 403 76.2
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 1.4e-161 573.5 425 67.3
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 3.2e-161 572.4 474 65.8
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 6.1e-160 568.2 403 68.2
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 6.7e-159 564.7 375 76.8
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 6.3e-157 558.1 405 68.6
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 3.3e-150 535.8 400 65.0
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 4.5e-147 525.4 308 85.1
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 6.1e-144 515.0 279 88.9
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 1.3e-138 497.3 330 78.8
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 5.2e-135 485.3 426 58.7
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 5.2e-135 485.3 327 74.9
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 8.3e-133 478.0 436 61.7
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.5e-129 466.5 339 70.8
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 4.9e-125 452.2 254 87.0
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 4.9e-125 452.2 254 87.0
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 8.3e-125 451.4 350 68.3
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.7e-122 443.7 402 60.4
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 2.7e-107 393.3 430 47.4
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 2.1e-96 357.1 242 77.3
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.9e-73 280.8 336 44.6
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 1.1e-60 238.4 355 40.8
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 4.1e-55 219.9 420 34.8
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.1e-51 207.6 117 88.0
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 3.0e-50 203.8 409 35.2
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.4e-47 194.1 359 34.3
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 3.1e-47 193.7 364 33.2
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 6.9e-47 192.6 102 89.2
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 6.5e-45 186.0 147 66.0
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.6e-43 181.4 100 88.0
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 4.4e-41 173.3 159 62.9
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 9.7e-41 172.2 385 30.9
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 1.2e-38 165.2 96 86.5
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 1.9e-20 104.8 51 88.2
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 1.3e-16 92.0 90 57.8
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 9.1e-15 85.9 51 88.2
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 7.5e-09 66.2 38 86.8
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.7e-08 65.1 42 78.6


User provided reference genes

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