Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0042600 Rhododendron simsii HOM05D028943 ORTHO05D025775 2.6e-199 698.4 321 100.0
Rhsim10G0042400 Rhododendron simsii HOM05D000909 ORTHO05D018098 4.4e-85 318.9 169 89.3
Rhsim02G0101400 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.9e-25 119.8 139 39.6
Rhsim10G0054300 Rhododendron simsii HOM05D028943 ORTHO05D000004 3.8e-20 103.2 127 41.7
Rhsim12G0011300 Rhododendron simsii HOM05D028943 ORTHO05D000004 3.2e-19 100.1 101 38.6
CSS0002270 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-16 91.7 133 34.6
CSS0039671 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-16 91.7 133 33.8
CSS0011659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.6e-16 89.4 133 36.1
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-15 85.9 133 33.1
Atru.chr12.2307 Acer truncatum HOM05D000003 ORTHO05D002259 6.2e-15 85.9 133 30.8
CSS0029089 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.2e-15 85.9 132 32.6
Lalb_Chr18g0059261 Lupinus albus HOM05D011108 ORTHO05D002335 6.2e-15 85.9 140 31.4
CSS0007419 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-14 83.6 158 29.7
CSS0014831 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-14 83.6 133 29.3
CSS0021010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.9e-14 82.4 137 32.8
MBI14_g15700_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.9e-14 82.4 124 35.5
Rhsim01G0162300 Rhododendron simsii HOM05D010927 ORTHO05D000004 2.0e-13 80.9 135 32.6
CSS0006402 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-13 80.1 136 26.5
Atru.chr10.984 Acer truncatum HOM05D000502 ORTHO05D002259 4.5e-13 79.7 131 31.3
COL.COLO4_11923 Corchorus olitorius HOM05D000003 ORTHO05D000004 7.6e-13 79.0 173 28.3
Rhsim09G0037100 Rhododendron simsii HOM05D000041 ORTHO05D000452 1.3e-12 78.2 80 48.8
CSS0028288 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-12 77.4 138 29.7
MBI13_g36728_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.8e-12 76.6 134 34.3
MBI16_g27832_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.9e-12 76.3 134 32.1
Aqoxy6G02512 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.4e-12 75.9 144 33.3
COL.COLO4_35424 Corchorus olitorius HOM05D000003 ORTHO05D000004 6.4e-12 75.9 133 30.1
Aqoxy6G02493 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.4e-12 75.5 144 32.6
Atru.chr4.1942 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-11 75.1 134 28.4
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-11 74.3 136 28.7
Atru.chr6.307 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-11 74.3 134 29.1
MBI03_g28951_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D007142 1.9e-11 74.3 134 29.9
Rhsim11G0108600 Rhododendron simsii HOM05D028943 ORTHO05D000004 2.4e-11 73.9 77 42.9
CSS0026307 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-11 73.2 105 33.3
Atru.chr11.2510 Acer truncatum HOM05D000003 ORTHO05D000004 5.4e-11 72.8 133 29.3
RcHm_v2.0_Chr6g0301391 Rosa chinensis HOM05D000003 ORTHO05D000004 7.1e-11 72.4 108 34.3
MBI01_g39982_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.3e-11 72.0 163 29.4
Atru.chr5.2369 Acer truncatum HOM05D000003 ORTHO05D002259 1.2e-10 71.6 133 27.8
Aqoxy2G01460 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-10 71.2 141 32.6
CSS0037039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-10 70.9 160 27.5
Aqoxy1G02855 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.7e-10 70.5 150 32.0
CSS0039930 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.5e-10 70.1 71 39.4
Aqoxy2G01404 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.6e-10 69.7 141 31.2
MBI10_g47168_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.6e-10 69.7 134 34.3
CSS0022483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.0e-10 69.3 71 38.0
PGSC0003DMG400013069 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.0e-09 68.6 159 28.9
MBI13_g00705_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.3e-09 68.2 156 32.7
MBI14_g42848_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.9e-09 66.6 123 30.1
Atru.chr2.3564 Acer truncatum HOM05D000003 ORTHO05D000004 6.7e-09 65.9 132 31.1
PSO675G4334 Papaver somniferum HOM05D000003 ORTHO05D000004 6.7e-09 65.9 137 29.9
CSS0016037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.7e-09 65.5 102 31.4
CSS0017940 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.7e-09 65.5 102 31.4
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.7e-09 65.5 123 27.6
Lj4g0000250 Lotus japonicus HOM05D000003 ORTHO05D025775 8.7e-09 65.5 104 25.0
Aqoxy4G00919 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-08 64.3 138 29.7
Atru.chr6.162 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-08 63.5 101 29.7
CANSAT54G2709 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-08 63.5 114 30.7
COL.COLO4_36005 Corchorus olitorius HOM05D000003 ORTHO05D002259 3.3e-08 63.5 91 28.6
CSS0034649 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 4.3e-08 63.2 86 34.9
Zm00001eb291430 Zea mays HOM05D000003 ORTHO05D000004 4.3e-08 63.2 122 29.5
Atru.chr12.1368 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-08 62.8 101 30.7
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.6e-08 62.8 136 29.4
MBI19_g24051_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.4e-08 62.4 134 28.4
Aqoxy6G01974 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.6e-08 62.0 142 27.5
CANSAT01G0149 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-08 62.0 109 32.1
Aqoxy4G01308 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-07 61.6 133 31.6
MBI18_g38519_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.6e-07 61.2 132 28.0
PSO210G7602 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-07 61.2 136 28.7
CSS0008056 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-07 60.5 134 29.9
Lalb_Chr12g0210331 Lupinus albus HOM05D032066 ORTHO05D025775 2.8e-07 60.5 89 32.6
PSO302G0219 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-07 60.5 134 29.9
PSO339G3314 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-07 60.5 134 27.6
COL.COLO4_07649 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.7e-07 60.1 144 29.2
Aqoxy6G02329 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.2e-07 59.3 137 30.7
PSO478G4317 Papaver somniferum HOM05D000003 ORTHO05D000004 6.2e-07 59.3 104 34.6
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.2e-07 59.3 107 30.8
CSS0010661 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-06 58.5 66 37.9
ECA246G3232 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-06 58.5 129 26.4
TPR.G22534 Trifolium pratense HOM05D000003 ORTHO05D000007 1.4e-06 58.2 106 31.1
MBI14_g43802_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.8e-06 57.8 134 29.9
PSO210G7306 Papaver somniferum HOM05D000003 ORTHO05D001026 1.8e-06 57.8 109 30.3
PSO782G0535 Papaver somniferum HOM05D000003 ORTHO05D000004 2.4e-06 57.4 102 31.4
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.4e-06 57.4 163 23.9
Rhsim02G0189800 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.1e-06 57.0 190 26.3
Aqoxy1G02399 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.0e-06 56.6 138 27.5
PSO724G0020 Papaver somniferum HOM05D000003 ORTHO05D000004 4.0e-06 56.6 103 30.1
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 4.0e-06 56.6 90 33.3
CSS0030341 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.3e-06 56.2 105 31.4
CANSAT21G2489 Cannabis sativa HOM05D000003 ORTHO05D000004 6.9e-06 55.8 109 30.3
PSO339G4400 Papaver somniferum HOM05D000003 ORTHO05D000004 6.9e-06 55.8 134 28.4
PSO832G3793 Papaver somniferum HOM05D000003 ORTHO05D000004 6.9e-06 55.8 135 26.7
Rhsim11G0018500 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.9e-06 55.8 153 23.5
Atru.chr5.2393 Acer truncatum HOM05D000003 ORTHO05D002259 9.0e-06 55.5 98 28.6


User provided reference genes

Program Settings