Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0031900 Rhododendron simsii HOM05D001999 ORTHO05D001994 3.2e-144 515.0 247 100.0
Rhsim13G0010900 Rhododendron simsii HOM05D001999 ORTHO05D001994 1.2e-61 240.7 177 70.1
vmacro02456 Vaccinium macrocarpon HOM05D001999 ORTHO05D001994 1.2e-50 204.1 179 63.7
RhsimUnG0054400 Rhododendron simsii HOM05D001718 ORTHO05D001994 7.3e-32 141.7 104 74.0
CSS0032431 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 1.8e-25 120.6 195 46.7
Dinv33049 Davidia involucrata HOM05D001999 ORTHO05D001994 2.4e-22 110.2 201 44.3
Rhsim10G0031700 Rhododendron simsii HOM05D001718 ORTHO05D001994 2.5e-19 100.1 71 76.1
Lj1A26T29 Lonicera japonica HOM05D001999 ORTHO05D001994 1.2e-18 97.8 112 51.8
Actinidia32221 Actinidia chinensis HOM05D001999 ORTHO05D001994 6.7e-17 92.0 179 43.0
Atru.chr5.1156 Acer truncatum HOM05D001999 ORTHO05D001994 7.4e-16 88.6 211 36.0
QL12p027615 Quercus lobata HOM05D001999 ORTHO05D001994 7.4e-16 88.6 168 38.1
Actinidia24344 Actinidia chinensis HOM05D001999 ORTHO05D001994 3.1e-14 83.2 195 38.5
vmacro15001 Vaccinium macrocarpon HOM05D001999 ORTHO05D001994 2.6e-13 80.1 192 38.0
Dinv40334 Davidia involucrata HOM05D001999 ORTHO05D001994 1.1e-11 74.7 113 46.9
Dinv30819 Davidia involucrata HOM05D001999 ORTHO05D001994 1.4e-11 74.3 114 45.6
Ciclev10020382m.g Citrus clementina HOM05D001999 ORTHO05D001994 2.5e-11 73.6 119 39.5
Haze_04134 Corylus avellana HOM05D001999 ORTHO05D001994 7.9e-10 68.6 116 42.2
Cfa006634 Carpinus fangiana HOM05D001999 ORTHO05D001994 1.0e-09 68.2 116 42.2
Thecc.05G313600 Theobroma cacao HOM05D001999 ORTHO05D001994 1.3e-09 67.8 116 43.1
CiPaw.07G022200 Carya illinoinensis HOM05D001999 ORTHO05D001994 1.8e-09 67.4 116 41.4
Nitab4.5_0003844g0010 Nicotiana tabacum HOM05D001999 ORTHO05D001994 6.7e-09 65.5 196 33.7
MD04G1199600 Malus domestica HOM05D001999 ORTHO05D001994 8.7e-09 65.1 116 39.7
Nitab4.5_0010216g0020 Nicotiana tabacum HOM05D001999 ORTHO05D001994 8.7e-09 65.1 113 41.6
COL.COLO4_23356 Corchorus olitorius HOM05D001999 ORTHO05D001994 1.9e-08 63.9 137 34.3
Oeu043739.1 Olea europaea HOM05D001999 ORTHO05D001994 5.7e-08 62.4 129 41.1
Actinidia35557 Actinidia chinensis HOM05D001999 ORTHO05D001994 7.4e-08 62.0 128 40.6
CSS0044976 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 7.4e-08 62.0 113 38.9
CSS0046081 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 7.4e-08 62.0 113 38.9
Prupe.6G320100 Prunus persica HOM05D001999 ORTHO05D001994 9.7e-08 61.6 116 40.5
Thecc.01G299000 Theobroma cacao HOM05D001999 ORTHO05D001994 2.8e-07 60.1 127 33.9
MD12G1212400 Malus domestica HOM05D001999 ORTHO05D001994 3.7e-07 59.7 116 39.7
Cc02_g34200 Coffea canephora HOM05D001999 ORTHO05D001994 1.1e-06 58.2 111 38.7
Haze_04925 Corylus avellana HOM05D001999 ORTHO05D001994 1.1e-06 58.2 216 32.9
Haze_04921 Corylus avellana HOM05D001999 ORTHO05D001994 1.4e-06 57.8 216 32.9
Peaxi162Scf00071g00544 Petunia axillaris HOM05D001999 ORTHO05D001994 1.4e-06 57.8 105 39.0
CSS0018606 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 1.8e-06 57.4 114 40.4
CSS0039587 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 1.8e-06 57.4 114 40.4
Duzib133G0338 Durio zibethinus HOM05D001999 ORTHO05D001994 2.4e-06 57.0 101 36.6
Gohir.A08G117700 Gossypium hirsutum HOM05D001999 ORTHO05D001994 4.1e-06 56.2 133 31.6


User provided reference genes

Program Settings