Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0024300 Rhododendron simsii HOM05D009941 ORTHO05D012025 4.3e-74 281.2 136 100.0
Rhsim10G0024400 Rhododendron simsii HOM05D009941 ORTHO05D012025 3.5e-68 261.5 125 100.0
Actinidia15701 Actinidia chinensis HOM05D009941 ORTHO05D012025 1.8e-43 179.5 100 85.0
Dinv11600 Davidia involucrata HOM05D009941 ORTHO05D012025 2.7e-28 129.0 99 65.7
Lsat_1_v5_gn_1_45361 Lactuca sativa HOM05D009941 ORTHO05D012025 1.1e-26 123.6 107 61.7
Manes.16G117901 Manihot esculenta HOM05D009941 ORTHO05D012025 3.8e-22 108.6 101 52.5
Nitab4.5_0002140g0010 Nicotiana tabacum HOM05D009941 ORTHO05D012025 1.7e-17 93.2 102 45.1
PGSC0003DMG400002264 Solanum tuberosum HOM05D009941 ORTHO05D012025 5.0e-14 81.6 108 41.7
PGSC0003DMG400002263 Solanum tuberosum HOM05D009941 ORTHO05D012025 2.5e-13 79.3 110 40.0
Solyc08g067580.3 Solanum lycopersicum HOM05D009941 ORTHO05D012025 4.2e-13 78.6 108 39.8
Solyc08g067560.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 2.1e-12 76.3 111 38.7
Sopen08g021530 Solanum pennellii HOM05D009941 ORTHO05D012025 2.1e-12 76.3 112 38.4
Manes.16G117801 Manihot esculenta HOM05D009941 ORTHO05D012025 4.7e-12 75.1 97 37.1
PGSC0003DMG400002257 Solanum tuberosum HOM05D009941 ORTHO05D012025 6.1e-12 74.7 107 40.2
Cc11_g01570 Coffea canephora HOM05D009941 ORTHO05D012025 1.0e-11 73.9 104 37.5
Cc11_g01580 Coffea canephora HOM05D009941 ORTHO05D012025 1.4e-11 73.6 100 37.0
Sopen08g021500 Solanum pennellii HOM05D009941 ORTHO05D012025 1.8e-11 73.2 113 37.2
PGSC0003DMG400002256 Solanum tuberosum HOM05D009941 ORTHO05D012025 3.0e-11 72.4 108 38.9
Solyc08g066780.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 2.8e-09 65.9 110 37.3
Cc11_g01590 Coffea canephora HOM05D009941 ORTHO05D012025 8.2e-09 64.3 99 36.4
Solyc08g067600.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 8.2e-09 64.3 108 37.0
Solyc12g017620.1 Solanum lycopersicum HOM05D009941 ORTHO05D012025 1.4e-08 63.5 113 35.4
PGSC0003DMG400037004 Solanum tuberosum HOM05D009941 ORTHO05D012025 4.1e-08 62.0 108 35.2
ECA248G1379 Erigeron canadensis HOM05D009941 ORTHO05D012025 8.5e-06 54.3 38 68.4


User provided reference genes

Program Settings