Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 1.6e-174 615.9 305 100.0
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 2.6e-95 352.8 301 62.5
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 1.5e-71 273.9 303 52.5
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 2.4e-69 266.5 284 50.7
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 4.3e-66 255.8 297 49.8
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 3.7e-65 252.7 297 49.5
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 8.4e-54 214.9 283 44.5
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 3.1e-48 196.4 272 43.0
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 3.4e-47 193.0 288 38.9
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 9.3e-45 184.9 279 40.9
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.6e-44 184.1 291 40.5
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 2.1e-44 183.7 279 40.9
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.1e-42 177.9 214 44.9
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 6.3e-41 172.2 279 39.8
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 2.4e-40 170.2 268 38.1
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 6.9e-40 168.7 284 35.6
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 9.1e-40 168.3 241 36.1
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 1.2e-39 167.9 237 39.2
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 1.5e-39 167.5 240 37.9
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 3.4e-39 166.4 272 37.5
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 5.9e-39 165.6 254 36.6
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.3e-38 164.5 258 38.8
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.2e-38 163.7 241 38.6
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 6.5e-38 162.2 241 37.8
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.9e-37 160.6 254 38.2
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.5e-37 160.2 241 37.3
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 9.4e-37 158.3 297 34.0
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 1.4e-35 154.5 270 37.4
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.1e-34 151.4 272 35.3
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.0e-34 150.6 288 35.4
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 4.8e-33 146.0 254 36.2
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 1.0e-30 138.3 289 34.9
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 2.1e-28 130.6 270 34.1
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 8.8e-27 125.2 270 34.4
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 1.1e-26 124.8 228 37.3
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 1.1e-26 124.8 280 34.3
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 8.2e-25 118.6 245 32.7
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 1.4e-24 117.9 228 36.0
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 1.6e-23 114.4 185 36.8
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.6e-23 113.6 170 38.8
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 4.5e-23 112.8 209 34.9
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 4.5e-23 112.8 198 37.4
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 5.9e-23 112.5 231 34.2
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 5.9e-23 112.5 228 34.6
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 2.9e-22 110.2 258 30.6
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 8.5e-22 108.6 215 34.0
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 8.5e-22 108.6 215 34.0
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 5.5e-21 105.9 199 33.2
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.2e-20 104.8 226 32.3
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 3.6e-20 103.2 207 32.4
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 8.0e-20 102.1 230 31.7
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 1.3e-17 94.7 279 29.7
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 1.7e-17 94.4 186 38.2
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 1.7e-17 94.4 154 38.3
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 2.2e-17 94.0 279 29.4
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 6.3e-17 92.4 199 30.2
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 8.2e-17 92.0 149 38.3
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 7.0e-16 89.0 62 66.1
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 9.1e-16 88.6 147 36.1
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 6.5e-14 82.4 218 30.7
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 3.7e-09 66.6 108 35.2
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 1.1e-08 65.1 149 27.5
HanXRQChr09g0268661 Helianthus annuus HOM05D008092 ORTHO05D010277 2.4e-08 63.9 53 56.6
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 2.4e-08 63.9 113 36.3
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 4.1e-08 63.2 207 25.6
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 4.1e-08 63.2 113 35.4
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 1.0e-06 58.5 40 55.0


User provided reference genes

Program Settings