Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0015400 Rhododendron simsii HOM05D002027 ORTHO05D024703 1.5e-30 135.6 69 100.0
Rhsim10G0016500 Rhododendron simsii HOM05D000047 ORTHO05D000044 1.4e-17 92.4 46 100.0
Rhsim10G0016600 Rhododendron simsii HOM05D002027 ORTHO05D004229 1.6e-16 89.0 51 82.4
Eucgr.I01736 Eucalyptus grandis HOM05D002027 ORTHO05D004229 1.3e-15 85.9 52 73.1
Rhsim10G0015500 Rhododendron simsii HOM05D002027 ORTHO05D004229 1.7e-15 85.5 49 81.6
vmacro05869 Vaccinium macrocarpon HOM05D002027 ORTHO05D004229 1.7e-15 85.5 51 80.4
GSVIVG01032392001 Vitis vinifera HOM05D002027 ORTHO05D004229 1.7e-15 85.5 53 73.6
Dinv33435 Davidia involucrata HOM05D002027 ORTHO05D004229 2.3e-15 85.1 51 78.4
vmacro05870 Vaccinium macrocarpon HOM05D002027 ORTHO05D024703 2.3e-15 85.1 55 74.5
CSS0038040 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D024703 3.0e-15 84.7 61 67.2
Peaxi162Scf00080g01317 Petunia axillaris HOM05D002027 ORTHO05D004229 5.1e-15 84.0 51 78.4
Prupe.3G292900 Prunus persica HOM05D002027 ORTHO05D004229 6.6e-15 83.6 51 78.4
TAR625G0926 Trochodendron aralioides HOM05D002027 ORTHO05D004229 8.7e-15 83.2 52 78.8
Solyc02g067870.3 Solanum lycopersicum HOM05D002027 ORTHO05D004229 1.1e-14 82.8 52 75.0
Sopen02g016990 Solanum pennellii HOM05D002027 ORTHO05D004229 1.1e-14 82.8 52 75.0
Hma1.2p1_1747F.1_g300460 Hydrangea macrophylla HOM05D002027 ORTHO05D004229 1.5e-14 82.4 52 76.9
Hma1.2p1_2550F.1_g324240 Hydrangea macrophylla HOM05D002027 ORTHO05D004229 1.5e-14 82.4 52 76.9
Lju41A42G102 Lonicera japonica HOM05D002027 ORTHO05D004229 1.5e-14 82.4 52 76.9
Manes.15G150400 Manihot esculenta HOM05D002027 ORTHO05D004229 2.5e-14 81.6 51 74.5
TAR374G0231 Trochodendron aralioides HOM05D002027 ORTHO05D004229 2.5e-14 81.6 51 74.5
PSO541G4249 Papaver somniferum HOM05D002027 ORTHO05D004229 3.3e-14 81.3 49 73.5
Migut.H00065 Erythranthe guttata HOM05D002027 ORTHO05D004229 4.3e-14 80.9 48 79.2
Ciclev10017779m.g Citrus clementina HOM05D002027 ORTHO05D004229 5.6e-14 80.5 51 70.6
COL.COLO4_29156 Corchorus olitorius HOM05D002027 ORTHO05D004229 5.6e-14 80.5 51 72.5
CSS0032324 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D004229 7.3e-14 80.1 53 71.7
CDE08G0066 Ceratophyllum demersum HOM05D002027 ORTHO05D004229 7.3e-14 80.1 50 74.0
PSO541G4480 Papaver somniferum HOM05D002027 ORTHO05D004229 9.6e-14 79.7 49 71.4
Nitab4.5_0002529g0060 Nicotiana tabacum HOM05D002027 ORTHO05D004229 1.6e-13 79.0 52 75.0
Nitab4.5_0001550g0100 Nicotiana tabacum HOM05D002027 ORTHO05D004229 2.1e-13 78.6 46 78.3
Nitab4.5_0003318g0090 Nicotiana tabacum HOM05D002027 ORTHO05D004229 2.1e-13 78.6 48 77.1
PGR142G3625 Punica granatum HOM05D002027 ORTHO05D004229 3.6e-13 77.8 50 74.0
Nitab4.5_0001860g0060 Nicotiana tabacum HOM05D002027 ORTHO05D004229 4.8e-13 77.4 51 72.5
CSS0010446 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D024703 6.2e-13 77.0 51 70.6
CAN.G1057.9 Capsicum annuum HOM05D002027 ORTHO05D004229 6.2e-13 77.0 52 69.2
TWI56G0726 Tripterygium wilfordii HOM05D002027 ORTHO05D004229 8.1e-13 76.6 53 69.8
Aqoxy5G03756 Aquilegia oxysepala HOM05D002027 ORTHO05D004229 1.1e-12 76.3 53 66.0
Cpa.g.c26638.2 Carica papaya HOM05D002027 ORTHO05D004229 1.4e-12 75.9 50 66.0
PSO754G0009 Papaver somniferum HOM05D002027 ORTHO05D004229 1.4e-12 75.9 53 66.0
Gohir.A07G223800 Gossypium hirsutum HOM05D002027 ORTHO05D004229 1.8e-12 75.5 51 66.7
Cc07_g01580 Coffea canephora HOM05D002027 ORTHO05D004229 2.4e-12 75.1 51 66.7
Gorai.001G266000 Gossypium raimondii HOM05D002027 ORTHO05D004229 3.1e-12 74.7 51 64.7
MBI06_g16063_MAGBIO Magnolia biondii HOM05D002027 ORTHO05D004229 3.1e-12 74.7 48 64.6
Oeu054624.1 Olea europaea HOM05D002027 ORTHO05D004229 3.1e-12 74.7 54 74.1
PGR142G2457 Punica granatum HOM05D002027 ORTHO05D004229 6.9e-12 73.6 48 68.8
PSO111G0070 Papaver somniferum HOM05D002027 ORTHO05D004229 9.0e-12 73.2 50 72.0
Oeu018142.1 Olea europaea HOM05D002027 ORTHO05D004229 1.5e-11 72.4 60 63.3
Gohir.D07G230900 Gossypium hirsutum HOM05D002027 ORTHO05D004229 2.0e-11 72.0 51 62.7
PSO111G0085 Papaver somniferum HOM05D002027 ORTHO05D004229 2.0e-11 72.0 53 62.3
SGA_v2.0_scaffold18G08275 Striga asiatica HOM05D002027 ORTHO05D004229 4.5e-11 70.9 47 68.1
Nn3g16699 Nelumbo nucifera HOM05D002027 ORTHO05D004229 5.8e-11 70.5 41 73.2
PSO832G3286 Papaver somniferum HOM05D002027 ORTHO05D004229 7.6e-11 70.1 48 70.8
DCAR_021726 Daucus carota HOM05D002027 ORTHO05D004229 9.9e-11 69.7 60 58.3
Lsat_1_v5_gn_4_184180 Lactuca sativa HOM05D002027 ORTHO05D004229 2.9e-10 68.2 53 58.5
PSO063G1117 Papaver somniferum HOM05D002027 ORTHO05D004229 4.9e-10 67.4 48 68.8
ECA232G2124 Erigeron canadensis HOM05D002027 ORTHO05D004229 1.9e-09 65.5 49 59.2
HanXRQChr09g0255251 Helianthus annuus HOM05D002027 ORTHO05D004229 3.2e-09 64.7 53 60.4
CANSAT64G1847 Cannabis sativa HOM05D002027 ORTHO05D004229 4.2e-09 64.3 48 66.7
CDE01G0735 Ceratophyllum demersum HOM05D002027 ORTHO05D024703 5.4e-09 63.9 54 57.4
Cfa007345 Carpinus fangiana HOM05D002027 ORTHO05D004229 7.1e-09 63.5 53 58.5
Cfa007348 Carpinus fangiana HOM05D002027 ORTHO05D004229 7.1e-09 63.5 53 58.5
Cfa007350 Carpinus fangiana HOM05D002027 ORTHO05D004229 7.1e-09 63.5 53 58.5
Aqoxy5G03754 Aquilegia oxysepala HOM05D002027 ORTHO05D004229 1.2e-08 62.8 50 64.0
Actinidia36120 Actinidia chinensis HOM05D002027 ORTHO05D004229 2.1e-08 62.0 49 61.2
Dinv25731 Davidia involucrata HOM05D000001 ORTHO05D000003 2.1e-08 62.0 65 55.4
ATR0824G228 Amborella trichopoda HOM05D002027 ORTHO05D004229 1.0e-07 59.7 45 68.9
PSO754G0050 Papaver somniferum HOM05D002027 ORTHO05D004229 1.0e-07 59.7 44 68.2


User provided reference genes

Program Settings