Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 7.5e-104 380.6 196 100.0
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 7.7e-101 370.5 196 98.0
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 6.5e-100 367.5 196 97.4
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 4.7e-74 281.6 195 77.9
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 8.0e-74 280.8 209 73.7
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 1.4e-73 280.0 193 77.7
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 4.4e-72 275.0 194 77.3
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.1e-65 253.8 199 71.9
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 5.2e-65 251.5 201 69.2
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 2.6e-64 249.2 204 66.2
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 2.6e-64 249.2 204 70.6
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 4.4e-64 248.4 207 69.1
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 9.9e-64 247.3 202 67.3
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 3.7e-63 245.4 194 72.7
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 8.3e-63 244.2 204 64.2
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 1.1e-62 243.8 200 68.0
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 3.2e-62 242.3 202 66.8
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 3.2e-62 242.3 194 69.1
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 5.4e-62 241.5 201 65.2
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 1.2e-61 240.4 199 66.8
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 2.1e-61 239.6 203 65.0
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 6.0e-61 238.0 204 64.7
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 7.8e-61 237.7 203 65.0
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 7.8e-61 237.7 199 65.3
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.0e-60 237.3 205 64.9
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.3e-60 236.9 196 66.8
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 1.3e-60 236.9 202 65.3
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.7e-60 236.5 205 64.9
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 1.7e-60 236.5 205 64.9
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 3.0e-60 235.7 204 65.2
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 3.9e-60 235.3 189 67.7
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 3.9e-60 235.3 204 65.2
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 5.1e-60 235.0 199 64.3
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 1.5e-59 233.4 205 62.0
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 3.3e-59 232.3 207 64.7
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 3.3e-59 232.3 207 64.7
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 5.6e-59 231.5 204 64.7
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 6.2e-58 228.0 210 59.0
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 8.1e-58 227.6 209 62.7
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 1.1e-57 227.3 206 63.1
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 2.4e-57 226.1 200 65.5
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 4.0e-57 225.3 211 60.7
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 4.0e-57 225.3 204 65.7
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 5.2e-57 224.9 196 61.2
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 1.2e-56 223.8 210 60.5
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 2.0e-56 223.0 188 62.2
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 3.4e-56 222.2 204 61.3
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 4.4e-56 221.9 204 60.8
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 5.8e-56 221.5 207 58.0
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 5.8e-56 221.5 207 58.0
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 5.8e-56 221.5 207 58.0
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 5.8e-56 221.5 207 58.0
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 5.8e-56 221.5 208 61.5
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 7.6e-56 221.1 202 63.9
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 7.6e-56 221.1 187 62.6
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 1.7e-55 219.9 207 57.5
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 1.7e-55 219.9 213 60.1
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 2.9e-55 219.2 206 59.2
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 2.9e-55 219.2 197 59.9
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 2.9e-55 219.2 208 61.1
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 3.8e-55 218.8 198 60.6
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 6.4e-55 218.0 203 62.6
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 8.4e-55 217.6 208 59.6
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 8.4e-55 217.6 210 58.6
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.4e-54 216.9 207 60.9
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 1.9e-54 216.5 198 64.1
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 3.2e-54 215.7 206 62.1
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 5.4e-54 214.9 198 59.6
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 7.1e-54 214.5 195 63.1
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 6.0e-53 211.5 197 59.9
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 1.0e-52 210.7 195 62.6
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 1.3e-52 210.3 193 61.1
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 1.3e-52 210.3 197 61.9
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 2.3e-52 209.5 186 62.4
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 3.0e-52 209.1 202 59.9
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 5.1e-52 208.4 198 60.6
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 8.7e-52 207.6 160 69.4
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 1.5e-51 206.8 205 58.5
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 4.3e-51 205.3 199 57.8
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 7.3e-51 204.5 174 62.6
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 9.6e-51 204.1 192 59.9
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 4.7e-50 201.8 147 74.1
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 8.1e-50 201.1 194 58.8
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 9.0e-49 197.6 195 59.0
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 2.6e-48 196.1 190 54.7
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 3.4e-48 195.7 203 53.7
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 4.4e-48 195.3 157 68.2
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 5.8e-48 194.9 200 54.5
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.7e-47 193.4 194 54.1
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 3.8e-47 192.2 203 53.7
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 4.9e-47 191.8 203 53.2
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 1.1e-46 190.7 201 55.2
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 4.2e-46 188.7 207 55.1
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 4.2e-46 188.7 194 53.1
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 1.6e-45 186.8 192 56.2
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 3.9e-44 182.2 185 54.1
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 3.9e-44 182.2 202 51.5
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 6.6e-44 181.4 202 49.5
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 8.1e-42 174.5 157 57.3
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.8e-41 173.3 149 61.7
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 3.2e-38 162.5 155 56.1
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 4.5e-32 142.1 162 46.9
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 2.1e-29 133.3 92 68.5
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 1.1e-27 127.5 162 49.4
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.1e-22 110.9 232 35.3
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.8e-20 103.6 119 54.6
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 1.1e-19 100.9 145 37.2
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 2.8e-18 96.3 118 52.5
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.2e-15 86.7 150 32.0
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 6.5e-15 85.1 146 34.2
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.5e-14 83.2 148 31.1
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 2.3e-12 76.6 154 33.8
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 6.7e-12 75.1 112 43.8
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.1e-11 74.3 170 29.4
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.3e-11 72.8 141 31.2
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 1.7e-10 70.5 74 48.6


User provided reference genes

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