Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.9e-176 622.5 331 100.0
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.9e-156 555.4 331 92.1
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 2.4e-102 376.3 364 64.0
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 1.5e-93 347.1 351 61.8
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 8.8e-89 331.3 384 57.0
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 3.9e-81 305.8 381 53.3
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 3.5e-77 292.7 298 61.7
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.5e-77 292.7 380 51.1
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.0e-76 291.2 375 51.5
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 2.7e-74 283.1 382 51.8
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 6.1e-74 282.0 372 51.9
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 8.0e-74 281.6 380 49.5
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.0e-73 279.6 375 49.3
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 4.0e-73 279.3 381 50.7
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 2.6e-72 276.6 420 47.9
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 3.3e-72 276.2 379 49.1
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 5.7e-72 275.4 379 48.8
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 7.5e-72 275.0 375 52.0
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 2.2e-71 273.5 380 49.2
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 2.8e-71 273.1 375 50.1
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 4.8e-71 272.3 377 50.1
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 1.8e-70 270.4 380 48.9
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 2.4e-70 270.0 378 49.5
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.6e-69 267.3 296 57.8
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 2.2e-68 263.5 379 48.3
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 2.2e-68 263.5 370 48.1
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 2.2e-68 263.5 381 49.3
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.5e-67 260.8 380 48.4
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 5.5e-67 258.8 383 48.3
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 7.2e-67 258.5 385 47.3
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 9.4e-67 258.1 367 49.9
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 4.7e-66 255.8 381 46.2
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 4.7e-66 255.8 386 45.9
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 4.7e-66 255.8 392 48.0
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 4.0e-65 252.7 388 47.7
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.2e-65 252.3 360 48.1
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 8.8e-65 251.5 368 47.8
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 2.0e-64 250.4 402 46.5
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.3e-63 247.7 377 47.5
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 1.7e-63 247.3 380 46.6
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 3.7e-63 246.1 382 47.1
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 1.1e-62 244.6 383 44.6
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 1.1e-62 244.6 381 44.6
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.4e-62 244.2 383 44.4
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 1.8e-62 243.8 390 44.4
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 1.8e-62 243.8 386 44.8
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 5.4e-62 242.3 359 49.3
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 9.1e-62 241.5 381 44.1
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 9.1e-62 241.5 381 44.1
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 2.7e-61 240.0 383 47.0
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 3.5e-61 239.6 355 48.5
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 4.5e-61 239.2 368 48.6
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 5.9e-61 238.8 381 43.8
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.0e-60 238.0 372 45.4
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 8.5e-60 235.0 381 45.7
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 1.9e-59 233.8 356 47.5
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 1.9e-59 233.8 274 55.5
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 3.2e-59 233.0 382 46.1
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 4.7e-58 229.2 386 46.4
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 3.0e-57 226.5 399 44.4
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 1.5e-56 224.2 379 42.2
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 2.6e-56 223.4 384 41.4
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 9.8e-56 221.5 374 44.1
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 1.3e-55 221.1 380 44.2
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 2.2e-55 220.3 337 45.1
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 2.2e-55 220.3 345 48.1
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 3.7e-55 219.5 388 43.3
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 1.1e-54 218.0 367 44.7
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.8e-54 217.2 294 48.3
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 2.4e-54 216.9 376 43.1
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 7.0e-54 215.3 368 45.1
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.6e-53 214.2 377 41.6
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 7.7e-53 211.8 360 43.1
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 1.7e-52 210.7 367 42.0
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 1.5e-51 207.6 364 44.2
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 1.0e-49 201.4 381 41.5
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 2.3e-49 200.3 366 43.7
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 2.3e-49 200.3 369 40.4
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 6.8e-49 198.7 368 41.3
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 8.9e-49 198.4 297 47.5
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 2.0e-48 197.2 381 40.2
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 5.7e-48 195.7 185 63.8
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 8.3e-47 191.8 383 38.4
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 2.7e-45 186.8 286 47.9
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 3.5e-45 186.4 296 45.9
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.0e-44 184.9 208 57.7
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.3e-44 184.5 415 37.3
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 5.0e-44 182.6 370 41.4
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 8.6e-44 181.8 372 39.5
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 6.2e-42 175.6 371 37.7
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 4.9e-39 166.0 246 45.9
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 6.4e-39 165.6 381 41.5
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 6.4e-39 165.6 323 40.6
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 8.3e-39 165.2 387 35.9
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.4e-38 163.7 385 35.6
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 1.3e-36 157.9 378 35.4
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 1.1e-33 148.3 268 43.7
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 2.0e-32 144.1 183 54.1
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 4.9e-31 139.4 213 48.4
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 7.1e-30 135.6 224 46.0
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 1.1e-27 128.3 294 39.1
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 2.1e-26 124.0 208 45.2
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 3.6e-26 123.2 291 37.5
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 9.9e-24 115.2 187 44.4
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 2.9e-23 113.6 187 43.9
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 6.0e-21 105.9 254 37.8
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 7.3e-19 99.0 121 52.1
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.0e-17 93.2 152 48.7
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 1.7e-15 87.8 140 41.4
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 6.0e-13 79.3 328 29.0
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 7.8e-13 79.0 70 62.9
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 3.6e-10 70.1 82 50.0


User provided reference genes

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