Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0209200 Rhododendron simsii HOM05D001099 ORTHO05D000958 6.3e-93 344.4 210 100.0
Actinidia34260 Actinidia chinensis HOM05D001099 ORTHO05D000958 2.5e-33 146.4 206 45.1
Rhsim03G0214500 Rhododendron simsii HOM05D001099 ORTHO05D000958 1.6e-32 143.7 109 65.1
Dinv29220 Davidia involucrata HOM05D001099 ORTHO05D000958 4.8e-32 142.1 204 45.6
Peaxi162Scf00300g00829 Petunia axillaris HOM05D001099 ORTHO05D000958 1.0e-29 134.4 110 61.8
Actinidia28278 Actinidia chinensis HOM05D001099 ORTHO05D000958 1.7e-29 133.7 203 44.3
Potri.012G022400 Populus trichocarpa HOM05D001099 ORTHO05D000958 1.9e-28 130.2 212 40.6
Sabra05G0140300 Salix brachista HOM05D001099 ORTHO05D000958 3.2e-28 129.4 212 40.6
Thecc.03G207300 Theobroma cacao HOM05D001099 ORTHO05D000958 2.7e-27 126.3 204 41.2
CSS0036209 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 3.5e-27 125.9 202 45.5
COL.COLO4_14358 Corchorus olitorius HOM05D001099 ORTHO05D000958 6.1e-27 125.2 205 42.0
Sabra12G0011400 Salix brachista HOM05D001099 ORTHO05D000958 6.1e-27 125.2 208 41.3
CSS0020189 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 1.0e-26 124.4 103 64.1
Cpa.g.sc3.147 Carica papaya HOM05D001099 ORTHO05D000958 1.3e-26 124.0 106 59.4
PGSC0003DMG400003219 Solanum tuberosum HOM05D001099 ORTHO05D000958 1.3e-26 124.0 110 57.3
Solyc03g082420.3 Solanum lycopersicum HOM05D001099 ORTHO05D000958 1.8e-26 123.6 110 57.3
Oeu023682.1 Olea europaea HOM05D001099 ORTHO05D000958 3.0e-26 122.9 102 61.8
Lj1A1027T36 Lonicera japonica HOM05D001099 ORTHO05D000958 6.7e-26 121.7 212 37.7
Hma1.2p1_0094F.1_g047280 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 8.7e-26 121.3 205 39.5
Gohir.D08G115600 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.1e-25 120.9 208 41.3
Sp7g25650 Schrenkiella parvula HOM05D001099 ORTHO05D000958 1.5e-25 120.6 107 55.1
Os03g0245800 Oryza sativa ssp. japonica HOM05D001099 ORTHO05D000958 2.5e-25 119.8 113 54.0
arahy.Tifrunner.gnm1.ann1.QR3Y2J Arachis hypogaea HOM05D001099 ORTHO05D000958 3.3e-25 119.4 109 51.4
arahy.Tifrunner.gnm1.ann1.6K80GF Arachis hypogaea HOM05D001099 ORTHO05D000958 5.7e-25 118.6 109 51.4
Manes.01G042200 Manihot esculenta HOM05D001099 ORTHO05D000958 5.7e-25 118.6 109 56.9
Duzib068G0845 Durio zibethinus HOM05D001099 ORTHO05D000958 7.4e-25 118.2 105 56.2
PGR142G4429 Punica granatum HOM05D001099 ORTHO05D000958 7.4e-25 118.2 112 55.4
MSTRG.8615 Avicennia marina HOM05D001099 ORTHO05D000958 1.3e-24 117.5 106 59.4
BcaNung01641 Brassica carinata HOM05D001099 ORTHO05D000958 1.6e-24 117.1 108 53.7
Hund21047 Selenicereus undatus HOM05D001099 ORTHO05D000958 1.6e-24 117.1 101 58.4
MD07G1298000 Malus domestica HOM05D001099 ORTHO05D000958 2.2e-24 116.7 207 41.1
Sc13g0010200 Simmondsia chinensis HOM05D001099 ORTHO05D000958 2.2e-24 116.7 105 57.1
Eucgr.L02980 Eucalyptus grandis HOM05D001099 ORTHO05D000958 2.8e-24 116.3 103 58.3
Gohir.A08G104100 Gossypium hirsutum HOM05D001099 ORTHO05D000958 2.8e-24 116.3 208 40.4
SalBow6G6877 Salvia bowleyana HOM05D001099 ORTHO05D000958 2.8e-24 116.3 107 57.9
BcaC09g50550 Brassica carinata HOM05D001099 ORTHO05D000958 4.8e-24 115.5 109 52.3
A01p19110 Brassica napus HOM05D001099 ORTHO05D000958 4.8e-24 115.5 109 52.3
C01p24030 Brassica napus HOM05D001099 ORTHO05D000958 4.8e-24 115.5 109 52.3
BolC1t02359H Brassica oleracea HOM05D001099 ORTHO05D000958 4.8e-24 115.5 109 52.3
BraA01t01853Z Brassica rapa HOM05D001099 ORTHO05D000958 4.8e-24 115.5 109 52.3
Hund09705 Selenicereus undatus HOM05D001099 ORTHO05D000958 4.8e-24 115.5 102 59.8
CiPaw.05G203400 Carya illinoinensis HOM05D001099 ORTHO05D000958 6.3e-24 115.2 103 58.3
Eucgr.K00423 Eucalyptus grandis HOM05D001099 ORTHO05D000958 6.3e-24 115.2 103 57.3
Thhalv10026184m.g Eutrema salsugineum HOM05D001099 ORTHO05D000958 6.3e-24 115.2 105 53.3
TWI39G0534 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 6.3e-24 115.2 211 41.7
EL10Ac3g05195 Beta vulgaris HOM05D001099 ORTHO05D000958 1.4e-23 114.0 93 60.2
MBI12_g16190_MAGBIO Magnolia biondii HOM05D001099 ORTHO05D000958 2.4e-23 113.2 105 55.2
Atru.chr12.2398 Acer truncatum HOM05D001099 ORTHO05D000958 4.1e-23 112.5 102 56.9
Prupe.2G317700 Prunus persica HOM05D001099 ORTHO05D000958 4.1e-23 112.5 204 40.2
THA.LOC104811889 Tarenaya hassleriana HOM05D001099 ORTHO05D000958 4.1e-23 112.5 114 52.6
Aa31LG1G13820 Aethionema arabicum HOM05D000495 ORTHO05D000357 5.3e-23 112.1 101 53.5
GSVIVG01038631001 Vitis vinifera HOM05D001099 ORTHO05D000958 5.3e-23 112.1 102 55.9
Duzib205G1413 Durio zibethinus HOM05D001099 ORTHO05D000958 6.9e-23 111.7 207 40.1
MSTRG.26985 Avicennia marina HOM05D001099 ORTHO05D000958 9.0e-23 111.3 105 58.1
CsaV3_5G000040 Cucumis sativus L. HOM05D001099 ORTHO05D000958 9.0e-23 111.3 110 51.8
Lalb_Chr08g0239771 Lupinus albus HOM05D001099 ORTHO05D000958 9.0e-23 111.3 107 51.4
AUR62035610 Chenopodium quinoa HOM05D001099 ORTHO05D000958 1.2e-22 110.9 107 55.1
Eucgr.A01416 Eucalyptus grandis HOM05D001099 ORTHO05D000958 2.0e-22 110.2 97 54.6
Lj1g0004957 Lotus japonicus HOM05D001099 ORTHO05D000958 2.0e-22 110.2 102 52.0
vmacro06431 Vaccinium macrocarpon HOM05D001099 ORTHO05D000958 2.6e-22 109.8 215 36.3
Glyma.04G229800 Glycine max HOM05D001099 ORTHO05D000958 3.4e-22 109.4 107 49.5
Ciclev10022024m.g Citrus clementina HOM05D001099 ORTHO05D000958 5.9e-22 108.6 109 53.2
Zm00001eb010530 Zea mays HOM05D001099 ORTHO05D000958 5.9e-22 108.6 115 52.2
CARHR235400 Cardamine hirsuta HOM05D001099 ORTHO05D000958 1.0e-21 107.8 107 51.4
FAN10G3756 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.0e-21 107.8 102 54.9
Glyma.06G134900 Glycine max HOM05D001099 ORTHO05D000958 1.0e-21 107.8 107 48.6
FAN03G0031 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.7e-21 107.1 207 37.7
FAN03G1450 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.7e-21 107.1 207 37.7
Nitab4.5_0000319g0220 Nicotiana tabacum HOM05D001099 ORTHO05D000958 2.2e-21 106.7 110 50.9
FvH4_7g32800 Fragaria vesca HOM05D001099 ORTHO05D000958 2.9e-21 106.3 102 53.9
FAN01G1585 Fragaria x ananassa HOM05D001099 ORTHO05D000958 2.9e-21 106.3 102 53.9
Ah.07g204810 Amaranthus hybridus HOM05D001099 ORTHO05D000958 6.5e-21 105.1 109 52.3
Aqoxy5G04287 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 6.5e-21 105.1 110 50.9
AL7G24990 Arabidopsis lyrata HOM05D001099 ORTHO05D000958 6.5e-21 105.1 109 50.5
FAN10G3023 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.1e-20 104.4 207 37.2
AT4G27670 Arabidopsis thaliana HOM05D001099 ORTHO05D000958 1.4e-20 104.0 109 49.5
CAN.G303.8 Capsicum annuum HOM05D001099 ORTHO05D000958 1.9e-20 103.6 111 50.5
Cc02_g00910 Coffea canephora HOM05D001099 ORTHO05D000958 1.9e-20 103.6 111 53.2
Lsat_1_v5_gn_8_4541 Lactuca sativa HOM05D001099 ORTHO05D000958 2.5e-20 103.2 207 36.2
VMungo1309G2540 Vigna mungo HOM05D001099 ORTHO05D000958 2.5e-20 103.2 105 48.6
Ca_16765_v3 Cicer arietinum L. HOM05D001099 ORTHO05D000958 3.2e-20 102.8 103 49.5
Phvul.009G046500 Phaseolus vulgaris HOM05D001099 ORTHO05D000958 7.2e-20 101.7 107 46.7
HPP92_022253 Vanilla planifolia HOM05D001099 ORTHO05D000958 7.2e-20 101.7 109 52.3
ECA233G5101 Erigeron canadensis HOM05D001099 ORTHO05D000958 1.6e-19 100.5 108 50.0
Gorai.008G265500 Gossypium raimondii HOM05D001099 ORTHO05D000958 1.6e-19 100.5 109 48.6
Gohir.D12G247450 Gossypium hirsutum HOM05D001099 ORTHO05D000958 2.1e-19 100.1 109 48.6
HanXRQChr08g0225741 Helianthus annuus HOM05D001099 ORTHO05D000958 2.1e-19 100.1 94 51.1
HPP92_007342 Vanilla planifolia HOM05D001099 ORTHO05D000958 2.1e-19 100.1 104 51.0
ClCG01G000120 Citrullus lanatus HOM05D001099 ORTHO05D000958 3.6e-19 99.4 124 45.2
MELO3C005923.2 Cucumis melo HOM05D001099 ORTHO05D000958 3.6e-19 99.4 85 57.6
Carub.0007s1315 Capsella rubella HOM05D001099 ORTHO05D000958 4.6e-19 99.0 106 46.2
Gorai.004G124600 Gossypium raimondii HOM05D001099 ORTHO05D000958 6.1e-19 98.6 208 37.5
RcHm_v2.0_Chr1g0382761 Rosa chinensis HOM05D001099 ORTHO05D000958 7.9e-19 98.2 100 51.0
Medtr3g092460 Medicago truncatula HOM05D001099 ORTHO05D000958 1.8e-18 97.1 134 39.6
TPR.G28973 Trifolium pratense HOM05D001099 ORTHO05D000958 2.3e-18 96.7 112 44.6
SGA_v2.0_scaffold44G16843 Striga asiatica HOM05D001099 ORTHO05D000958 5.1e-18 95.5 109 48.6
Psat5g073120 Pisum sativum HOM05D001099 ORTHO05D000958 6.7e-18 95.1 116 42.2
FvH4_6g02120 Fragaria vesca HOM05D001099 ORTHO05D000958 8.8e-18 94.7 101 48.5
Psat5g073280 Pisum sativum HOM05D001099 ORTHO05D000958 2.0e-17 93.6 116 41.4
QL09p007324 Quercus lobata HOM05D001099 ORTHO05D000958 4.3e-17 92.4 111 51.4
Sed0022054 Sechium edule HOM05D001099 ORTHO05D000958 1.3e-16 90.9 108 45.4
Nitab4.5_0006389g0020 Nicotiana tabacum HOM05D001099 ORTHO05D000958 3.7e-16 89.4 90 52.2
FAN09G3490 Fragaria x ananassa HOM05D001099 ORTHO05D000958 4.8e-16 89.0 101 45.5
SEGI_20528 Sequoiadendron giganteum HOM05D001099 ORTHO05D000958 1.7e-13 80.5 107 41.1
MD01G1227600 Malus domestica HOM05D001099 ORTHO05D000958 2.2e-13 80.1 64 60.9
Hma1.2p1_0415F.1_g148130 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 5.0e-13 79.0 52 67.3
CANSAT21G0926 Cannabis sativa HOM05D001099 ORTHO05D000958 6.5e-13 78.6 107 40.2
CDE05G0669 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 1.9e-12 77.0 83 44.6
Sopen03g022140 Solanum pennellii HOM05D001099 ORTHO05D000958 9.4e-12 74.7 62 56.5
FAN03G0999 Fragaria x ananassa HOM05D001099 ORTHO05D000958 6.1e-11 72.0 77 49.4
FAN03G0774 Fragaria x ananassa HOM05D001099 ORTHO05D000958 7.9e-11 71.6 76 48.7
Peaxi162Scf00797g00012 Petunia axillaris HOM05D001099 ORTHO05D000958 7.9e-11 71.6 81 39.5
DCAR_008975 Daucus carota HOM05D001099 ORTHO05D000958 1.8e-10 70.5 108 38.0
SEGI_24420 Sequoiadendron giganteum HOM05D001099 ORTHO05D000958 1.8e-10 70.5 106 37.7
FAN04G3139 Fragaria x ananassa HOM05D001099 ORTHO05D000958 3.9e-10 69.3 70 51.4
FAN08G1760 Fragaria x ananassa HOM05D001099 ORTHO05D000958 8.8e-10 68.2 70 51.4
Migut.E00230 Erythranthe guttata HOM05D001099 ORTHO05D000958 1.1e-09 67.8 88 38.6
Oeu020323.1 Olea europaea HOM05D001099 ORTHO05D000958 2.0e-09 67.0 101 37.6
FvH4_5g23240 Fragaria vesca HOM05D001099 ORTHO05D000958 2.6e-09 66.6 68 52.9
FAN17G1345 Fragaria x ananassa HOM05D001099 ORTHO05D000958 3.3e-09 66.2 108 36.1
Sc03g0006910 Simmondsia chinensis HOM05D001099 ORTHO05D000958 7.4e-09 65.1 88 38.6
Lj6g0024762 Lotus japonicus HOM05D001099 ORTHO05D000958 1.3e-08 64.3 85 37.6
Eucgr.H04692 Eucalyptus grandis HOM05D001099 ORTHO05D000958 1.7e-08 63.9 83 38.6
Sed0005232 Sechium edule HOM05D001099 ORTHO05D000958 1.7e-08 63.9 108 33.3
CDE07G1226 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 2.2e-08 63.5 94 35.1
FAN14G3395 Fragaria x ananassa HOM05D001099 ORTHO05D000958 2.2e-08 63.5 61 52.5
Cc11_g16360 Coffea canephora HOM05D001099 ORTHO05D000958 2.8e-08 63.2 96 36.5
Solyc05g014280.4 Solanum lycopersicum HOM05D001099 ORTHO05D000958 2.8e-08 63.2 88 38.6
vmacro01096 Vaccinium macrocarpon HOM05D001099 ORTHO05D000958 2.8e-08 63.2 83 38.6
Aqoxy5G03699 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 3.7e-08 62.8 115 33.9
Gohir.A12G246750 Gossypium hirsutum HOM05D001099 ORTHO05D000958 3.7e-08 62.8 69 46.4
Manes.13G013400 Manihot esculenta HOM05D001099 ORTHO05D000958 3.7e-08 62.8 102 33.3
Rhsim12G0036900 Rhododendron simsii HOM05D001099 ORTHO05D000958 4.8e-08 62.4 91 37.4
AagrBONN_evm.TU.Sc2ySwM_228.5017 Anthoceros agrestis HOM05D001099 ORTHO05D000958 6.3e-08 62.0 83 39.8
Aqoxy5G03580 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 6.3e-08 62.0 115 33.9
FvH4_4g24850 Fragaria vesca HOM05D001099 ORTHO05D000958 6.3e-08 62.0 103 33.0
FAN12G2577 Fragaria x ananassa HOM05D001099 ORTHO05D000958 6.3e-08 62.0 103 33.0
FAN22G1154 Fragaria x ananassa HOM05D001099 ORTHO05D000958 6.3e-08 62.0 99 36.4
Pp3c7_25570 Physcomitrium patens HOM05D001099 ORTHO05D000958 6.3e-08 62.0 103 37.9
Sopen05g009370 Solanum pennellii HOM05D001099 ORTHO05D000958 6.3e-08 62.0 92 35.9
FAN14G4560 Fragaria x ananassa HOM05D001099 ORTHO05D000958 8.2e-08 61.6 61 50.8
SalBow8G3255 Salvia bowleyana HOM05D001099 ORTHO05D000958 8.2e-08 61.6 83 38.6
Sc03g0006990 Simmondsia chinensis HOM05D001099 ORTHO05D000958 8.2e-08 61.6 88 37.5
MELO3C011908.2 Cucumis melo HOM05D001099 ORTHO05D000958 1.1e-07 61.2 83 36.1
SEGI_10361 Sequoiadendron giganteum HOM05D000136 ORTHO05D000958 1.1e-07 61.2 101 37.6
Haze_12316 Corylus avellana HOM05D000960 ORTHO05D000958 1.4e-07 60.8 116 33.6
DCAR_024078 Daucus carota HOM05D001099 ORTHO05D000958 1.4e-07 60.8 97 34.0
MD13G1108500 Malus domestica HOM05D001099 ORTHO05D000958 1.4e-07 60.8 109 33.0
MD16G1108600 Malus domestica HOM05D001099 ORTHO05D000958 1.4e-07 60.8 100 36.0
PGSC0003DMG400011977 Solanum tuberosum HOM05D001099 ORTHO05D000958 1.4e-07 60.8 94 36.2
VMungo1383G2261 Vigna mungo HOM05D001099 ORTHO05D000958 1.4e-07 60.8 87 34.5
CANSAT01G0592 Cannabis sativa HOM05D001099 ORTHO05D000958 1.8e-07 60.5 83 36.1
CiPaw.05G174800 Carya illinoinensis HOM05D001099 ORTHO05D000958 1.8e-07 60.5 89 34.8
Pp3c1_7030 Physcomitrium patens HOM05D001099 ORTHO05D000958 1.8e-07 60.5 58 46.6
AUR62006016 Chenopodium quinoa HOM05D001099 ORTHO05D000958 2.4e-07 60.1 90 42.2
Ca_16495_v3 Cicer arietinum L. HOM05D001099 ORTHO05D000958 2.4e-07 60.1 104 33.7
Hma1.2p1_0415F.1_g148120 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 2.4e-07 60.1 143 36.4
PGR119G0832 Punica granatum HOM05D001099 ORTHO05D000958 2.4e-07 60.1 127 32.3
ClCG05G026230 Citrullus lanatus HOM05D001099 ORTHO05D000958 3.1e-07 59.7 96 34.4
FAN07G1920 Fragaria x ananassa HOM05D001099 ORTHO05D000958 3.1e-07 59.7 99 35.4
Manes.12G017300 Manihot esculenta HOM05D001099 ORTHO05D000958 3.1e-07 59.7 100 33.0
Mapoly0045s0146 Marchantia polymorpha HOM05D000136 ORTHO05D000958 3.1e-07 59.7 92 37.0
Nitab4.5_0001318g0050 Nicotiana tabacum HOM05D001099 ORTHO05D000958 3.1e-07 59.7 96 35.4
Prupe.1G237800 Prunus persica HOM05D001099 ORTHO05D000958 3.1e-07 59.7 109 32.1
Actinidia12873 Actinidia chinensis HOM05D001099 ORTHO05D000958 4.1e-07 59.3 112 33.9
Medtr3g086050 Medicago truncatula HOM05D001099 ORTHO05D000958 4.1e-07 59.3 104 30.8
Cfa009285 Carpinus fangiana HOM05D001099 ORTHO05D000958 5.3e-07 58.9 116 34.5
COL.COLO4_23563 Corchorus olitorius HOM05D000960 ORTHO05D000958 5.3e-07 58.9 93 36.6
Dinv14779 Davidia involucrata HOM05D001099 ORTHO05D000958 5.3e-07 58.9 82 34.1
GSVIVG01010308001 Vitis vinifera HOM05D001099 ORTHO05D000958 5.3e-07 58.9 78 35.9
SGA_v2.0_scaffold87G27117 Striga asiatica HOM05D001099 ORTHO05D000958 7.0e-07 58.5 103 35.0
Glyma.11G246600 Glycine max HOM05D001099 ORTHO05D000958 9.1e-07 58.2 113 31.0
Phvul.001G258200 Phaseolus vulgaris HOM05D001099 ORTHO05D000958 9.1e-07 58.2 87 34.5
Sabra10G0017200 Salix brachista HOM05D001099 ORTHO05D000958 1.2e-06 57.8 109 31.2
Potri.010G053400 Populus trichocarpa HOM05D001099 ORTHO05D000958 1.5e-06 57.4 97 34.0
Nn3g16578 Nelumbo nucifera HOM05D001099 ORTHO05D000958 2.0e-06 57.0 84 32.1
Ciclev10032587m.g Citrus clementina HOM05D001099 ORTHO05D000958 2.6e-06 56.6 117 32.5
Hma1.2p1_0079F.1_g041510 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 2.6e-06 56.6 112 34.8
Duzib268G1734 Durio zibethinus HOM05D001099 ORTHO05D000958 4.5e-06 55.8 75 38.7
TWI36G0065 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 4.5e-06 55.8 81 37.0
RcHm_v2.0_Chr4g0431921 Rosa chinensis HOM05D001099 ORTHO05D000958 5.9e-06 55.5 99 31.3
CSS0029931 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 7.7e-06 55.1 96 32.3
CSS0030519 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 7.7e-06 55.1 96 32.3
Ciclev10016547m.g Citrus clementina HOM05D001099 ORTHO05D000958 7.7e-06 55.1 106 29.2


User provided reference genes

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