Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.0e-103 380.2 205 100.0
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 3.8e-74 282.0 203 76.8
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 1.2e-48 197.2 213 60.6
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 2.2e-42 176.4 194 57.7
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 9.4e-41 171.0 218 56.9
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 7.9e-40 167.9 196 53.6
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 2.3e-39 166.4 214 53.7
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 1.5e-38 163.7 155 61.3
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 1.7e-37 160.2 219 50.2
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 6.3e-37 158.3 203 53.7
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 8.2e-37 157.9 214 50.9
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 1.4e-36 157.1 202 49.0
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 1.8e-36 156.8 165 56.4
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 4.1e-36 155.6 134 61.2
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 7.0e-36 154.8 205 49.3
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 9.1e-36 154.5 205 52.2
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 9.1e-36 154.5 107 73.8
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 2.0e-35 153.3 183 51.4
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 3.5e-35 152.5 107 72.0
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 5.9e-35 151.8 107 72.0
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 5.9e-35 151.8 107 72.0
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 5.9e-35 151.8 215 47.9
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 2.2e-34 149.8 126 62.7
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 2.2e-34 149.8 208 48.6
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 3.8e-34 149.1 206 48.5
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 3.8e-34 149.1 178 52.8
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 5.0e-34 148.7 107 70.1
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.1e-33 147.5 156 53.8
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 1.9e-33 146.7 148 56.8
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.9e-33 146.7 213 51.2
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 3.2e-33 146.0 200 47.5
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 3.2e-33 146.0 131 61.1
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 4.2e-33 145.6 209 49.8
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 4.2e-33 145.6 103 69.9
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.5e-33 145.2 156 53.2
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 7.2e-33 144.8 138 60.1
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 7.2e-33 144.8 138 60.1
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 7.2e-33 144.8 138 60.1
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 7.2e-33 144.8 156 53.8
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.2e-33 144.8 156 53.2
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.2e-33 144.8 156 53.2
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.2e-33 144.8 156 53.8
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 9.4e-33 144.4 222 46.8
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 9.4e-33 144.4 208 47.1
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 1.6e-32 143.7 139 56.8
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 2.1e-32 143.3 206 48.5
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 2.1e-32 143.3 149 56.4
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 2.1e-32 143.3 115 58.3
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 2.7e-32 142.9 141 58.9
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 2.7e-32 142.9 163 57.1
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 3.6e-32 142.5 164 53.7
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.7e-32 142.1 156 53.2
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 8.0e-32 141.4 135 57.8
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.0e-31 141.0 115 56.5
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 1.4e-31 140.6 206 47.6
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 1.4e-31 140.6 130 56.2
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 1.8e-31 140.2 210 50.5
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.8e-31 140.2 111 64.0
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 1.8e-31 140.2 210 47.6
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 2.3e-31 139.8 148 55.4
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 3.0e-31 139.4 216 46.8
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 4.0e-31 139.0 107 69.2
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 6.7e-31 138.3 152 54.6
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 8.8e-31 137.9 105 68.6
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 2.0e-30 136.7 202 46.5
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 2.0e-30 136.7 204 48.5
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 2.6e-30 136.3 105 68.6
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 2.6e-30 136.3 107 63.6
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 2.6e-30 136.3 108 65.7
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 2.6e-30 136.3 149 51.7
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 4.4e-30 135.6 199 46.7
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 5.7e-30 135.2 138 58.7
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 5.7e-30 135.2 156 52.6
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 5.7e-30 135.2 199 44.2
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 9.7e-30 134.4 130 56.2
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 9.7e-30 134.4 101 65.3
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 2.8e-29 132.9 117 61.5
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 2.8e-29 132.9 142 52.1
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 4.8e-29 132.1 199 47.7
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 4.8e-29 132.1 207 47.8
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 8.2e-29 131.3 142 54.9
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 1.1e-28 131.0 114 60.5
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 4.1e-28 129.0 107 59.8
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 1.7e-26 123.6 193 43.0
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 1.5e-25 120.6 101 55.4
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 4.7e-24 115.5 85 69.4
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 3.0e-23 112.8 151 49.0
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 2.0e-22 110.2 130 50.8
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.8e-20 103.6 148 42.6
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 9.1e-20 101.3 208 38.9
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 5.9e-19 98.6 128 50.8
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 8.6e-18 94.7 174 35.6
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 7.2e-17 91.7 197 38.6
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 4.4e-14 82.4 122 42.6
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 1.3e-13 80.9 71 50.7
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 2.2e-13 80.1 51 68.6
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 3.7e-13 79.3 153 43.1
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 3.7e-13 79.3 153 43.1
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 2.4e-12 76.6 139 36.7
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 3.1e-12 76.3 170 42.9
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 5.4e-12 75.5 97 51.5
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 7.0e-12 75.1 121 43.0
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.1e-09 67.8 110 46.4
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.9e-09 67.0 142 38.7
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 3.3e-09 66.2 153 39.9
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.6e-08 63.9 61 54.1
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.4e-07 60.8 63 50.8


User provided reference genes

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