Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 1.0e-277 959.5 513 100.0
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 5.1e-237 824.3 527 86.1
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 1.2e-225 786.6 513 83.4
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 8.5e-224 780.4 515 82.7
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 1.2e-206 723.4 511 76.9
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 2.0e-204 716.1 512 76.0
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 4.7e-198 694.9 523 72.3
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 8.0e-198 694.1 508 74.0
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 2.3e-197 692.6 500 74.6
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 2.3e-197 692.6 508 73.8
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 4.0e-197 691.8 506 73.9
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 9.8e-196 687.2 507 73.6
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 9.8e-196 687.2 509 73.1
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 1.3e-195 686.8 506 73.7
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 1.7e-195 686.4 512 72.7
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 1.1e-194 683.7 508 72.8
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 1.4e-194 683.3 510 72.5
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 7.7e-193 677.6 512 72.5
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 2.9e-192 675.6 507 72.2
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 2.9e-192 675.6 511 72.6
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 6.5e-192 674.5 515 71.5
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 1.1e-191 673.7 512 74.4
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 1.9e-191 672.9 512 70.5
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 1.2e-190 670.2 509 71.5
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 1.6e-190 669.8 507 72.6
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 1.6e-190 669.8 509 70.9
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 2.1e-190 669.5 515 70.9
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 8.0e-190 667.5 514 72.0
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 9.8e-188 660.6 512 71.1
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 1.7e-184 649.8 519 68.0
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 3.8e-184 648.7 515 69.7
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 2.5e-183 646.0 515 68.9
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 1.2e-182 643.7 513 68.6
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 1.2e-182 643.7 514 68.5
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 4.0e-181 638.6 515 68.7
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 5.2e-181 638.3 575 65.0
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 6.8e-181 637.9 507 68.2
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 3.4e-180 635.6 513 67.8
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 3.4e-180 635.6 513 67.8
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 9.8e-180 634.0 497 70.0
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 1.7e-179 633.3 509 68.8
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 1.1e-178 630.6 512 67.6
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 2.4e-178 629.4 508 68.5
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 7.0e-178 627.9 512 67.2
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 7.0e-178 627.9 511 67.3
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 1.3e-176 623.6 515 66.6
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 2.3e-176 622.9 508 66.9
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 8.6e-176 620.9 507 67.3
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 1.9e-175 619.8 508 67.1
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 2.5e-175 619.4 490 69.4
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 3.3e-175 619.0 514 66.7
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 4.3e-175 618.6 509 66.4
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 2.3e-173 612.8 508 68.9
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 2.3e-173 612.8 501 66.9
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 8.9e-173 610.9 503 67.4
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 1.2e-172 610.5 502 64.9
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 1.2e-172 610.5 511 65.4
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 1.5e-172 610.1 506 66.8
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 4.4e-172 608.6 503 67.6
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 9.8e-172 607.4 529 64.3
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 2.9e-171 605.9 503 67.2
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 1.1e-170 604.0 508 66.5
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 1.9e-170 603.2 534 62.9
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 2.4e-170 602.8 450 75.1
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 5.4e-170 601.7 510 66.7
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.5e-167 593.6 560 61.6
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 2.5e-167 592.8 509 64.4
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 4.0e-165 585.5 425 75.8
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 4.0e-165 585.5 469 69.9
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 2.6e-164 582.8 509 65.4
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 4.4e-164 582.0 507 63.7
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 3.2e-162 575.9 471 68.4
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 1.0e-160 570.9 486 67.3
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 2.3e-157 559.7 507 60.7
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 3.1e-157 559.3 467 67.2
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.0e-156 556.6 463 67.8
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 4.9e-155 552.0 501 61.9
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 2.3e-152 543.1 508 62.2
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.5e-151 540.4 527 59.4
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 1.9e-151 540.0 422 71.1
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 2.1e-150 536.6 480 64.0
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 6.8e-149 531.6 475 63.8
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 1.3e-147 527.3 448 66.3
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 8.4e-147 524.6 481 62.4
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 1.3e-139 500.7 499 58.9
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 2.1e-126 456.8 364 70.6
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 3.7e-126 456.1 364 67.3
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 5.0e-115 419.1 353 64.9
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 3.7e-110 402.9 507 52.1
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 2.0e-100 370.5 513 45.0
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 2.7e-97 360.1 298 68.1
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 6.3e-94 349.0 255 73.7
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 4.1e-93 346.3 399 51.4
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 4.7e-89 332.8 293 63.1
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 3.4e-79 300.1 252 65.9
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 1.6e-76 291.2 246 65.9
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 5.2e-72 276.2 242 66.9
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 5.0e-67 259.6 267 53.6
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 1.2e-63 248.4 180 72.2
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 9.5e-58 228.8 188 67.0
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 6.2e-57 226.1 223 58.3
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 8.0e-57 225.7 165 72.1
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 3.7e-54 216.9 138 79.7
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 7.8e-44 182.6 172 58.7
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 6.6e-43 179.5 156 65.4
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 1.9e-34 151.4 161 54.0
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 8.1e-33 146.0 505 28.7
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 4.4e-31 140.2 97 79.4
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 9.9e-31 139.0 113 71.7
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 3.8e-30 137.1 90 78.9
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 1.6e-28 131.7 113 69.0
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 8.1e-25 119.4 77 79.2
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 1.1e-21 109.0 64 79.7
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 1.9e-21 108.2 72 79.2
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 7.1e-21 106.3 94 66.0
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 1.0e-19 102.4 92 63.0
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.6e-15 87.8 59 78.0
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 7.6e-15 86.3 57 77.2
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 6.2e-09 66.6 45 66.7
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 1.1e-08 65.9 90 50.0


User provided reference genes

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