Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0183800 Rhododendron simsii HOM05D007902 ORTHO05D009839 1.6e-115 419.5 214 100.0
vmacro09979 Vaccinium macrocarpon HOM05D007902 ORTHO05D009839 1.8e-63 246.5 225 61.3
Dinv21823 Davidia involucrata HOM05D007902 ORTHO05D009839 5.4e-47 191.8 207 54.6
Actinidia07804 Actinidia chinensis HOM05D007902 ORTHO05D009839 1.3e-45 187.2 205 55.1
Hma1.2p1_0292F.1_g115760 Hydrangea macrophylla HOM05D007902 ORTHO05D009839 1.2e-43 180.6 201 52.7
TAR623G0347 Trochodendron aralioides HOM05D007902 ORTHO05D009839 1.3e-37 160.6 203 49.3
Haze_17334 Corylus avellana HOM05D007902 ORTHO05D009839 5.2e-34 148.7 200 45.5
Manes.07G138200 Manihot esculenta HOM05D007902 ORTHO05D009839 1.1e-31 141.0 202 45.0
QL08p064506 Quercus lobata HOM05D007902 ORTHO05D009839 4.1e-31 139.0 208 41.8
Potri.019G049100 Populus trichocarpa HOM05D007902 ORTHO05D009839 5.4e-31 138.7 199 43.7
Sabra19G0058600 Salix brachista HOM05D007902 ORTHO05D009839 7.8e-30 134.8 199 41.7
Nn2g10362 Nelumbo nucifera HOM05D007902 ORTHO05D009839 1.3e-29 134.0 205 43.9
Ciclev10032767m.g Citrus clementina HOM05D007902 ORTHO05D009839 2.3e-29 133.3 204 42.6
HanXRQChr09g0251491 Helianthus annuus HOM05D007902 ORTHO05D009839 3.9e-29 132.5 182 46.7
Cpa.g.sc19.89 Carica papaya HOM05D007902 ORTHO05D009839 6.6e-29 131.7 208 39.9
Prupe.2G261300 Prunus persica HOM05D007902 ORTHO05D009839 8.6e-29 131.3 201 41.3
Lsat_1_v5_gn_9_59200 Lactuca sativa HOM05D007902 ORTHO05D009839 2.5e-28 129.8 202 41.6
MD01G1163300 Malus domestica HOM05D007902 ORTHO05D009839 2.5e-28 129.8 209 41.6
Gohir.A13G005700 Gossypium hirsutum HOM05D007902 ORTHO05D009839 3.3e-28 129.4 187 43.9
Cc02_g05590 Coffea canephora HOM05D007902 ORTHO05D009839 1.6e-27 127.1 195 43.1
CiPaw.01G304600 Carya illinoinensis HOM05D007902 ORTHO05D009839 2.8e-27 126.3 189 42.3
Gohir.D13G005400 Gossypium hirsutum HOM05D007902 ORTHO05D009839 2.8e-27 126.3 218 40.8
Gorai.013G006100 Gossypium raimondii HOM05D007902 ORTHO05D009839 8.1e-27 124.8 198 41.9
CAN.G591.5 Capsicum annuum HOM05D007902 ORTHO05D009839 1.1e-26 124.4 204 40.2
Migut.F00588 Erythranthe guttata HOM05D007902 ORTHO05D009839 1.4e-26 124.0 214 38.8
MD07G1231300 Malus domestica HOM05D007902 ORTHO05D009839 1.8e-26 123.6 209 39.7
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 2.0e-25 120.2 237 36.7
Eucgr.G03123 Eucalyptus grandis HOM05D007902 ORTHO05D009839 9.8e-25 117.9 185 41.1
Peaxi162Scf00464g00015 Petunia axillaris HOM05D007902 ORTHO05D009839 1.4e-23 114.0 143 46.9
COL.COLO4_26867 Corchorus olitorius HOM05D005928 ORTHO05D007500 3.2e-23 112.8 191 42.4
Sopen06g015820 Solanum pennellii HOM05D007902 ORTHO05D009839 3.2e-23 112.8 184 41.3
Aqoxy4G02352 Aquilegia oxysepala HOM05D007902 ORTHO05D009839 7.1e-23 111.7 217 37.8
FAN01G1070 Fragaria x ananassa HOM05D001122 ORTHO05D001877 7.1e-23 111.7 175 41.7
EL10Ac2g04265 Beta vulgaris HOM05D007902 ORTHO05D009839 2.7e-22 109.8 219 37.4
RcHm_v2.0_Chr1g0371741 Rosa chinensis HOM05D007902 ORTHO05D009839 6.0e-22 108.6 208 37.5
FvH4_7g25601 Fragaria vesca HOM05D007902 ORTHO05D009839 7.8e-22 108.2 184 40.2
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 1.0e-21 107.8 161 40.4
FAN03G2841 Fragaria x ananassa HOM05D001122 ORTHO05D001877 1.7e-21 107.1 185 40.0
Oeu054429.1 Olea europaea HOM05D007902 ORTHO05D009839 1.7e-21 107.1 138 47.1
SalBow5G2004 Salvia bowleyana HOM05D007902 ORTHO05D009839 1.1e-20 104.4 193 40.9
FAN06G1561 Fragaria x ananassa HOM05D007902 ORTHO05D009839 2.5e-20 103.2 197 38.6
CANSAT56G3130 Cannabis sativa HOM05D007902 ORTHO05D009839 9.5e-20 101.3 203 38.4
Nitab4.5_0002713g0030 Nicotiana tabacum HOM05D007902 ORTHO05D009839 4.7e-19 99.0 183 38.3
Lj1C1068T20 Lonicera japonica HOM05D007902 ORTHO05D009839 8.1e-19 98.2 76 59.2
Nitab4.5_0000263g0270 Nicotiana tabacum HOM05D007902 ORTHO05D009839 1.8e-18 97.1 183 37.7
TWI53G0910 Tripterygium wilfordii HOM05D007902 ORTHO05D009839 2.3e-18 96.7 187 38.5
PGR142G4074 Punica granatum HOM05D007902 ORTHO05D009839 4.0e-18 95.9 216 31.9
unitig_52.g16781 Utricularia gibba HOM05D007902 ORTHO05D009839 6.8e-18 95.1 148 41.9
Lj1A965T42 Lonicera japonica HOM05D007902 ORTHO05D009839 8.9e-18 94.7 76 56.6
Sp6g37500 Schrenkiella parvula HOM05D007902 ORTHO05D009839 8.9e-18 94.7 205 34.6
C09p71380 Brassica napus HOM05D007902 ORTHO05D009839 1.2e-17 94.4 221 33.9
BraA10t45132Z Brassica rapa HOM05D007902 ORTHO05D009839 1.2e-17 94.4 208 36.1
LjContig00357g0001230 Lotus japonicus HOM05D007902 ORTHO05D009839 1.2e-17 94.4 184 37.5
Ca_06023_v3 Cicer arietinum L. HOM05D007902 ORTHO05D009839 1.5e-17 94.0 196 35.7
Atru.chr12.150 Acer truncatum HOM05D005928 ORTHO05D007500 2.6e-17 93.2 210 35.2
arahy.Tifrunner.gnm1.ann1.C7E7HV Arachis hypogaea HOM05D007902 ORTHO05D009839 5.8e-17 92.0 193 35.2
Carub.0006s0425 Capsella rubella HOM05D007902 ORTHO05D009839 9.9e-17 91.3 187 35.3
CDE07G0481 Ceratophyllum demersum HOM05D007902 ORTHO05D009839 9.9e-17 91.3 126 40.5
AT5G05330 Arabidopsis thaliana HOM05D007902 ORTHO05D009839 1.3e-16 90.9 216 32.9
arahy.Tifrunner.gnm1.ann1.0H4UJT Arachis hypogaea HOM05D007902 ORTHO05D009839 1.3e-16 90.9 193 34.7
BolC9t59901H Brassica oleracea HOM05D007902 ORTHO05D009839 1.3e-16 90.9 211 33.2
Hund13474 Selenicereus undatus HOM05D007902 ORTHO05D009839 1.3e-16 90.9 213 32.9
AL6G15200 Arabidopsis lyrata HOM05D007902 ORTHO05D009839 1.7e-16 90.5 209 33.5
PSO017G6410 Papaver somniferum HOM05D007902 ORTHO05D009839 2.9e-16 89.7 216 34.7
BcaB05g21722 Brassica carinata HOM05D007902 ORTHO05D009839 3.8e-16 89.4 202 32.7
BcaC06g32241 Brassica carinata HOM05D007902 ORTHO05D009839 3.8e-16 89.4 211 34.6
Thecc.10G175100 Theobroma cacao HOM05D007902 ORTHO05D009839 3.8e-16 89.4 201 37.8
CARHR207920 Cardamine hirsuta HOM05D007902 ORTHO05D009839 6.4e-16 88.6 188 34.6
ECA232G2170 Erigeron canadensis HOM05D001122 ORTHO05D001877 1.2e-14 84.3 100 46.0
BcaC03g13156 Brassica carinata HOM05D007902 ORTHO05D009839 3.5e-14 82.8 200 33.0
BraA02t04842Z Brassica rapa HOM05D007902 ORTHO05D009839 2.3e-13 80.1 200 33.0
C02p02280 Brassica napus HOM05D007902 ORTHO05D009839 1.1e-12 77.8 200 32.5
MBI03_g40382_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 4.3e-12 75.9 73 49.3
PGSC0003DMG400029078 Solanum tuberosum HOM05D007902 ORTHO05D009839 1.2e-11 74.3 144 36.8
Psat1g014880 Pisum sativum HOM05D007902 ORTHO05D009839 4.7e-11 72.4 154 33.8
TAR623G0840 Trochodendron aralioides HOM05D007902 ORTHO05D009839 1.1e-10 71.2 99 45.5
PSO407G0011 Papaver somniferum HOM05D007902 ORTHO05D009839 3.1e-10 69.7 181 32.0
Thhalv10014946m.g Eutrema salsugineum HOM05D007902 ORTHO05D009839 6.9e-10 68.6 165 31.5
AUR62012352 Chenopodium quinoa HOM05D038520 ORTHO05D009839 2.6e-09 66.6 115 37.4
Lalb_Chr17g0347071 Lupinus albus HOM05D007902 ORTHO05D009839 2.6e-09 66.6 73 45.2
Medtr0191s0020 Medicago truncatula HOM05D007902 ORTHO05D009839 3.4e-09 66.2 162 35.2
BolC2t06195H Brassica oleracea HOM05D007902 ORTHO05D009839 1.3e-08 64.3 200 31.0
COL.COLO4_08802 Corchorus olitorius HOM05D000576 ORTHO05D000368 3.5e-06 56.2 86 44.2
COL.COLO4_08937 Corchorus olitorius HOM05D007902 ORTHO05D009839 3.5e-06 56.2 40 62.5


User provided reference genes

Program Settings