Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 7.4e-139 497.3 265 100.0
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 2.0e-104 382.9 264 79.9
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 2.1e-72 276.6 276 62.7
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 8.6e-71 271.2 274 60.9
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 1.4e-65 253.8 273 59.3
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 9.9e-59 231.1 242 57.0
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 1.3e-58 230.7 232 59.1
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 2.3e-55 219.9 234 57.3
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 3.0e-55 219.5 236 57.2
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.9e-55 219.2 274 54.0
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.6e-53 213.8 276 52.2
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 6.2e-53 211.8 269 50.9
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 8.1e-53 211.5 232 56.5
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 1.2e-51 207.6 241 53.5
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 2.0e-51 206.8 229 56.8
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 7.6e-51 204.9 243 53.5
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 7.6e-51 204.9 272 50.7
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 6.4e-50 201.8 275 50.5
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.1e-49 201.1 240 52.1
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 3.2e-49 199.5 212 58.0
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 1.2e-48 197.6 228 53.9
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 1.2e-48 197.6 218 56.0
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 2.7e-48 196.4 202 58.4
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 6.0e-48 195.3 218 55.5
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 1.0e-47 194.5 218 54.6
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 1.0e-47 194.5 266 47.7
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 3.0e-47 193.0 243 50.6
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 3.9e-47 192.6 265 50.6
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 3.3e-46 189.5 200 56.0
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 4.3e-46 189.1 242 50.0
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 9.6e-46 188.0 272 47.4
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 2.1e-45 186.8 235 51.1
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 2.8e-45 186.4 202 55.4
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 4.8e-45 185.7 232 50.9
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 8.1e-45 184.9 260 48.5
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 1.1e-44 184.5 236 50.4
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 1.1e-44 184.5 266 47.0
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 1.4e-44 184.1 202 55.0
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.8e-44 183.7 204 55.4
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 2.4e-44 183.3 239 51.0
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 4.0e-44 182.6 251 50.6
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 5.3e-44 182.2 237 49.8
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 5.3e-44 182.2 234 49.6
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 6.9e-44 181.8 251 50.6
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 6.9e-44 181.8 251 50.6
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 9.0e-44 181.4 205 54.6
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 9.9e-43 177.9 247 51.4
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 1.3e-42 177.6 232 51.3
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 1.3e-42 177.6 193 53.9
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 3.8e-42 176.0 239 46.9
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 6.4e-42 175.3 233 50.6
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 6.4e-42 175.3 192 54.2
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.1e-41 174.5 242 48.8
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 3.2e-41 172.9 264 45.8
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 9.3e-41 171.4 267 47.6
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 2.1e-40 170.2 241 49.0
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 2.1e-40 170.2 266 44.4
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 4.6e-40 169.1 248 49.6
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 8.7e-39 164.9 241 46.1
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 1.9e-38 163.7 278 44.6
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 9.6e-38 161.4 219 52.1
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 1.6e-37 160.6 212 50.0
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 6.2e-37 158.7 227 46.3
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 5.3e-36 155.6 208 49.0
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 1.5e-35 154.1 269 46.5
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.0e-34 151.4 235 43.0
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 1.3e-34 151.0 226 46.5
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 3.8e-34 149.4 266 41.0
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 4.9e-34 149.1 242 45.0
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 4.9e-34 149.1 235 44.7
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 6.5e-34 148.7 105 75.2
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 6.5e-34 148.7 105 75.2
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 6.5e-34 148.7 132 61.4
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 6.5e-34 148.7 228 44.7
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 8.4e-34 148.3 263 42.6
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 1.1e-33 147.9 147 60.5
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 1.1e-33 147.9 218 46.3
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 1.9e-33 147.1 131 65.6
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 1.9e-33 147.1 143 61.5
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 3.2e-33 146.4 235 43.4
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 7.1e-33 145.2 234 41.9
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 9.3e-33 144.8 169 55.6
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 1.6e-32 144.1 235 42.1
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 2.1e-32 143.7 144 57.6
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 2.1e-32 143.7 144 57.6
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 2.7e-32 143.3 169 52.7
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 2.7e-32 143.3 144 57.6
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 3.5e-32 142.9 122 64.8
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 6.0e-32 142.1 145 58.6
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 7.9e-32 141.7 179 53.1
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 1.3e-31 141.0 169 52.1
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 1.3e-31 141.0 171 50.9
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 1.8e-31 140.6 114 66.7
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 1.8e-31 140.6 114 66.7
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 1.8e-31 140.6 114 66.7
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 1.8e-31 140.6 114 66.7
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 1.8e-31 140.6 135 59.3
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 2.3e-31 140.2 153 56.2
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 7.4e-30 135.2 159 54.1
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 4.8e-29 132.5 239 41.4
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 8.2e-29 131.7 146 54.1
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 1.4e-28 131.0 210 44.3
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 2.0e-27 127.1 133 57.1
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.0e-26 124.8 198 45.5
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 2.5e-22 110.2 83 66.3
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 2.0e-19 100.5 183 42.6
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 1.2e-16 91.3 188 39.9
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 1.8e-15 87.4 131 42.7
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 1.8e-15 87.4 219 33.3


User provided reference genes

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