Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 1.0e-171 606.7 309 100.0
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 2.3e-155 552.4 307 88.6
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 1.1e-146 523.5 309 84.5
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 1.9e-141 506.1 309 82.2
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 3.2e-141 505.4 307 81.1
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 2.3e-139 499.2 307 79.2
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 8.1e-129 464.2 309 72.8
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 2.0e-127 459.5 309 73.5
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 2.2e-126 456.1 307 72.0
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 4.9e-126 454.9 308 72.4
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 8.4e-126 454.1 307 72.0
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 1.9e-125 453.0 307 70.7
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 5.4e-125 451.4 307 70.4
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 1.9e-122 443.0 310 70.0
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 1.3e-121 440.3 309 68.9
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 2.1e-121 439.5 309 69.9
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 1.4e-120 436.8 309 69.9
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 3.1e-120 435.6 307 68.7
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 5.3e-120 434.9 320 68.1
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 6.9e-120 434.5 307 69.1
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 9.0e-120 434.1 309 69.3
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 1.2e-119 433.7 307 69.7
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 2.6e-119 432.6 305 69.8
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 3.4e-119 432.2 311 67.5
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 4.4e-119 431.8 307 68.4
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 1.3e-118 430.3 309 67.6
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 8.4e-118 427.6 307 67.8
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 2.4e-117 426.0 308 69.2
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 5.4e-117 424.9 307 66.8
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 9.3e-117 424.1 310 66.8
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 1.2e-116 423.7 310 66.8
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 2.1e-116 422.9 308 67.9
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 4.6e-116 421.8 307 66.4
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 4.6e-116 421.8 309 66.7
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 7.9e-116 421.0 310 66.8
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 6.6e-115 417.9 306 68.0
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 2.5e-114 416.0 309 66.7
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 1.6e-113 413.3 309 65.7
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 2.1e-113 412.9 309 65.4
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 6.2e-113 411.4 309 65.4
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 8.1e-113 411.0 309 66.0
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.4e-112 410.2 309 65.0
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.8e-112 409.8 309 65.0
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 3.1e-112 409.1 309 64.7
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 9.0e-112 407.5 309 65.0
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 1.5e-111 406.8 309 65.7
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.5e-111 405.2 309 64.4
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 5.8e-111 404.8 307 64.8
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 8.4e-110 401.0 309 64.1
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 1.4e-109 400.2 353 60.3
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 2.4e-109 399.4 309 62.8
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 3.2e-109 399.1 429 51.0
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.0e-107 394.0 268 75.7
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 3.0e-107 392.5 310 62.9
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 3.0e-107 392.5 310 62.9
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 3.9e-107 392.1 268 75.4
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 5.1e-107 391.7 309 62.5
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.1e-106 390.6 309 62.8
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 3.3e-106 389.0 307 62.5
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 4.3e-106 388.7 309 61.8
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 2.8e-105 386.0 354 57.9
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 3.1e-104 382.5 273 68.1
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 1.2e-103 380.6 360 57.2
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 2.6e-103 379.4 305 60.0
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.6e-103 379.4 250 77.2
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 2.6e-103 379.4 309 58.9
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 5.8e-103 378.3 344 56.4
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 3.2e-101 372.5 307 59.3
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 1.3e-99 367.1 294 61.2
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 5.1e-99 365.2 309 57.9
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 2.1e-97 359.8 309 57.0
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 2.9e-94 349.4 303 58.1
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 3.8e-94 349.0 304 56.9
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 4.2e-93 345.5 309 56.6
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 6.7e-91 338.2 308 53.9
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 1.1e-90 337.4 308 53.6
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 1.1e-90 337.4 308 53.6
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 2.5e-90 336.3 297 59.3
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 1.3e-89 334.0 308 54.2
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 1.3e-89 334.0 310 55.8
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 1.6e-89 333.6 240 68.3
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 4.8e-89 332.0 238 67.6
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 9.0e-88 327.8 314 52.9
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 1.0e-86 324.3 308 51.3
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 1.3e-86 323.9 233 64.4
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 2.2e-86 323.2 304 53.0
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 7.2e-85 318.2 308 51.0
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 2.7e-84 316.2 293 52.9
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 3.6e-84 315.8 308 51.3
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 1.8e-83 313.5 308 51.0
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 3.0e-83 312.8 309 54.4
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 8.8e-83 311.2 291 53.3
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 1.5e-82 310.5 219 73.5
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 8.2e-81 304.7 243 64.2
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 1.8e-80 303.5 326 53.1
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 5.9e-79 298.5 222 65.8
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 2.9e-78 296.2 231 67.1
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 1.1e-74 284.3 293 48.1
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 6.5e-70 268.5 306 45.8
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 4.2e-69 265.8 176 74.4
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 9.4e-61 238.0 242 50.4
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 1.2e-55 221.1 240 50.0
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 2.0e-50 203.8 293 36.5
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 7.7e-47 191.8 115 78.3
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 3.6e-36 156.4 269 30.1
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 5.4e-32 142.5 112 61.6
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 6.2e-28 129.0 67 88.1
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.3e-27 127.1 67 86.6
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 2.2e-25 120.6 67 80.6
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 2.1e-23 114.0 65 76.9
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 8.6e-22 108.6 64 73.4
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 2.2e-09 67.4 62 51.6


User provided reference genes

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