Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 6.5e-151 537.3 269 100.0
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 1.3e-127 459.9 302 78.8
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 2.2e-122 442.6 269 80.3
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 7.8e-120 434.1 250 82.4
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 9.5e-118 427.2 250 83.2
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 1.2e-117 426.8 258 79.1
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 3.6e-117 425.2 269 75.5
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.1e-116 423.7 256 77.3
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 2.6e-115 419.1 242 83.1
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 4.4e-115 418.3 240 83.8
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 2.4e-113 412.5 241 81.3
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 3.5e-112 408.7 260 73.8
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 4.6e-112 408.3 259 77.2
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 6.0e-112 407.9 260 75.4
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 1.0e-111 407.1 259 76.4
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 1.0e-111 407.1 265 74.0
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.3e-111 406.8 259 76.4
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 3.0e-111 405.6 258 75.2
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 1.5e-110 403.3 239 79.9
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 3.3e-110 402.1 241 78.4
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 4.3e-110 401.7 259 75.7
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 1.2e-109 400.2 243 77.8
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 2.1e-109 399.4 242 77.7
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 2.8e-109 399.1 269 72.9
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 8.1e-109 397.5 258 73.3
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 4.0e-108 395.2 239 79.5
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 5.2e-108 394.8 269 71.7
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 2.0e-107 392.9 240 77.5
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 2.6e-107 392.5 251 73.7
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 5.8e-107 391.3 244 76.6
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 3.8e-106 388.7 238 75.6
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 3.8e-106 388.7 243 76.5
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 1.9e-105 386.3 240 78.3
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 1.9e-105 386.3 240 78.3
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 7.1e-105 384.4 242 73.1
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 1.2e-104 383.6 242 73.1
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 1.2e-104 383.6 258 72.1
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.7e-104 382.5 250 73.6
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 3.5e-104 382.1 269 69.1
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.3e-103 379.4 243 75.3
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 5.1e-103 378.3 243 74.5
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 8.7e-103 377.5 241 76.8
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 1.1e-102 377.1 243 75.3
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 2.5e-102 375.9 242 73.1
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 7.3e-102 374.4 241 73.9
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 7.3e-102 374.4 240 75.8
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 1.6e-101 373.2 241 73.4
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 1.6e-101 373.2 240 74.2
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 2.8e-101 372.5 256 69.1
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 1.4e-100 370.2 241 73.0
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.8e-100 369.8 257 70.8
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 1.8e-100 369.8 239 69.9
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.1e-100 369.0 269 64.7
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 6.9e-100 367.9 269 64.7
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 6.9e-100 367.9 246 73.6
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 9.0e-100 367.5 269 64.7
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.2e-99 367.1 238 71.8
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.2e-99 367.1 269 64.7
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 1.5e-99 366.7 267 70.8
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.4e-99 365.5 269 64.7
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 4.5e-99 365.2 251 69.7
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 5.8e-99 364.8 237 74.7
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 5.8e-99 364.8 241 72.2
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 7.6e-99 364.4 264 65.9
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 1.7e-98 363.2 241 72.2
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 2.2e-98 362.8 256 68.4
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 2.9e-98 362.5 255 69.4
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 6.4e-98 361.3 269 65.8
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 6.4e-98 361.3 269 63.9
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 4.2e-97 358.6 259 69.1
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.2e-96 357.1 249 73.5
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 1.2e-96 357.1 241 71.0
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 1.6e-96 356.7 258 66.7
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 1.9e-94 349.7 247 68.8
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 3.3e-94 349.0 289 60.6
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 2.1e-93 346.3 247 68.0
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 1.1e-92 344.0 255 64.7
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 9.0e-92 340.9 255 64.3
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 6.7e-87 324.7 236 65.3
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 8.7e-87 324.3 253 62.8
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 5.6e-86 321.6 254 60.6
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 1.6e-85 320.1 252 60.7
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 2.1e-85 319.7 193 75.1
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 1.1e-84 317.4 252 60.7
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 7.1e-81 304.7 182 78.6
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 3.0e-79 299.3 185 74.6
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 4.8e-77 292.0 183 76.0
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 1.8e-76 290.0 182 75.3
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 3.1e-76 289.3 187 77.0
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 5.3e-76 288.5 232 58.2
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 9.0e-76 287.7 237 63.7
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.5e-75 287.0 232 57.8
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 5.0e-74 282.0 182 73.6
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 5.5e-73 278.5 182 71.4
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 6.1e-72 275.0 178 78.7
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 2.5e-70 269.6 181 70.7
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 7.7e-67 258.1 180 68.3
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 1.7e-66 256.9 237 50.6
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 6.5e-66 255.0 238 50.0
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 1.9e-65 253.4 228 51.8
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 1.4e-60 237.3 249 48.2
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.8e-60 236.9 229 52.4
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 7.2e-57 224.9 205 51.7
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.2e-56 224.2 253 44.7
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 8.8e-55 218.0 215 47.9
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 1.0e-50 204.5 109 81.7
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 2.9e-50 203.0 147 58.5
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 7.5e-46 188.3 179 46.9
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.8e-39 167.2 181 46.4
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 2.8e-37 159.8 248 42.7
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 5.5e-33 145.6 207 36.7
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 2.0e-30 137.1 106 67.9
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 2.7e-19 100.1 152 34.2


User provided reference genes

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