Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.1e-209 731.1 360 100.0
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.4e-196 689.5 419 84.7
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 3.1e-164 582.0 370 80.8
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.2e-163 580.1 359 81.3
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.8e-143 513.1 359 72.7
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 6.1e-136 488.0 363 71.6
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 3.1e-132 475.7 366 67.2
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 4.5e-131 471.9 359 69.1
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 7.7e-131 471.1 332 71.4
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.3e-130 470.3 319 73.7
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.7e-130 469.9 303 77.6
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.2e-130 469.5 322 71.7
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 8.5e-130 467.6 310 74.2
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 1.1e-129 467.2 316 73.4
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 9.4e-129 464.2 305 75.7
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 9.4e-129 464.2 358 67.3
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.6e-128 463.4 360 66.1
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 2.1e-128 463.0 288 77.8
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 3.6e-128 462.2 346 68.2
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 4.7e-128 461.8 360 65.8
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 6.1e-128 461.5 289 78.9
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.8e-127 459.9 317 70.7
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 6.8e-127 458.0 360 65.3
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 6.8e-127 458.0 291 77.0
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 3.4e-126 455.7 309 72.5
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 3.4e-126 455.7 286 79.4
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 4.4e-126 455.3 358 66.8
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 9.8e-126 454.1 328 70.1
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 9.8e-126 454.1 327 69.7
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.3e-125 453.8 295 74.9
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.7e-125 453.4 328 69.8
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 2.8e-125 452.6 330 69.1
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 2.8e-125 452.6 312 73.1
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 3.7e-125 452.2 356 65.2
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 4.8e-125 451.8 291 75.3
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 6.3e-125 451.4 288 77.4
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 8.3e-125 451.1 311 72.3
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 8.3e-125 451.1 314 72.6
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 8.3e-125 451.1 289 77.2
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 1.4e-124 450.3 316 72.5
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 5.4e-124 448.4 320 70.3
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 9.1e-124 447.6 356 65.7
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 9.1e-124 447.6 295 73.6
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.2e-123 447.2 320 72.8
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 5.9e-123 444.9 317 70.0
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 7.7e-123 444.5 275 81.8
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 7.7e-123 444.5 326 69.3
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.3e-122 443.7 317 69.4
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.7e-122 443.4 357 63.9
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 2.2e-122 443.0 288 75.3
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 2.2e-122 443.0 312 70.5
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 5.0e-122 441.8 320 70.0
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 5.0e-122 441.8 306 70.3
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 8.5e-122 441.0 289 74.0
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 1.5e-121 440.3 288 75.3
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 2.5e-121 439.5 339 67.0
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 2.5e-121 439.5 304 72.4
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 7.2e-121 438.0 292 73.6
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.2e-120 437.2 303 71.9
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.2e-120 437.2 331 66.5
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 3.6e-120 435.6 287 73.2
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.4e-119 433.7 304 71.1
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 3.0e-119 432.6 326 66.3
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 3.0e-119 432.6 306 70.6
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 8.8e-119 431.0 289 74.4
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 2.6e-118 429.5 295 71.9
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 4.9e-117 425.2 306 69.0
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.8e-116 423.3 288 73.3
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 5.4e-116 421.8 294 71.4
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 9.1e-116 421.0 319 67.7
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.6e-115 420.2 306 68.6
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 2.7e-115 419.5 292 71.2
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 2.7e-115 419.5 334 64.7
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 5.9e-115 418.3 279 74.9
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 5.0e-114 415.2 314 66.6
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 4.2e-113 412.1 310 67.7
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 4.2e-113 412.1 288 71.5
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.6e-112 410.2 288 70.8
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 6.1e-112 408.3 355 62.8
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 8.9e-111 404.4 288 70.5
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.3e-109 400.6 273 73.6
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 1.2e-107 394.0 319 65.2
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 3.1e-103 379.4 268 70.5
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 6.8e-103 378.3 342 58.5
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 7.5e-102 374.8 307 60.3
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 7.0e-100 368.2 289 63.3
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.5e-99 365.9 275 68.0
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-97 360.9 283 65.4
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.0e-94 350.1 300 62.0
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 1.4e-92 344.0 221 76.9
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 3.5e-91 339.3 290 62.8
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.3e-89 332.4 272 64.3
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 8.9e-87 324.7 266 59.4
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.7e-82 310.5 204 74.5
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.1e-81 307.8 251 65.3
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 2.0e-78 297.0 253 63.2
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 9.3e-76 288.1 397 41.3
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 5.4e-68 262.3 171 76.0
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.7e-67 260.0 159 80.5
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 2.2e-61 240.4 253 53.4
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 2.1e-56 223.8 150 71.3
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.6e-54 216.9 142 73.9
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 3.4e-54 216.5 163 65.6
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.6e-46 190.3 253 45.5
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 2.9e-45 186.8 108 82.4
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 1.4e-39 167.9 107 72.0
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.9e-39 165.6 183 52.5
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 9.0e-39 165.2 183 52.5
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 5.7e-33 146.0 89 77.5
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 2.2e-32 144.1 82 81.7
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.4e-31 141.4 89 71.9
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.7e-27 127.1 83 80.7
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 5.1e-26 122.9 66 84.8
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.6e-22 110.5 60 86.7
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.2e-21 107.5 144 47.2
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.7e-18 95.9 98 55.1
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 3.1e-15 87.0 60 70.0
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.7e-14 84.0 47 80.9
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 1.0e-10 72.0 41 85.4
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 3.4e-09 67.0 90 44.4
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 1.3e-08 65.1 44 72.7
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 7.7e-06 55.8 42 64.3


User provided reference genes

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