Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0123600 Rhododendron simsii HOM05D008780 ORTHO05D010894 1.5e-75 286.2 152 100.0
RhsimUnG0149600 Rhododendron simsii HOM05D008780 ORTHO05D010894 1.2e-64 250.0 152 86.8
Rhsim09G0124100 Rhododendron simsii HOM05D008780 ORTHO05D010894 1.5e-38 163.3 134 67.2
Rhsim09G0123900 Rhododendron simsii HOM05D008780 ORTHO05D010894 2.5e-38 162.5 98 89.8
Actinidia16144 Actinidia chinensis HOM05D008780 ORTHO05D010894 6.3e-26 121.3 113 54.9
RhsimUnG0149900 Rhododendron simsii HOM05D008780 ORTHO05D010894 5.0e-23 111.7 154 49.4
vmacro10444 Vaccinium macrocarpon HOM05D008780 ORTHO05D010894 1.9e-22 109.8 141 56.7
Cc11_g11660 Coffea canephora HOM05D008780 ORTHO05D010894 1.6e-16 90.1 149 37.6
SalBow2G0298 Salvia bowleyana HOM05D008780 ORTHO05D010894 4.5e-16 88.6 115 49.6
SalBow1G8003 Salvia bowleyana HOM05D008780 ORTHO05D010894 1.3e-15 87.0 115 48.7
Oeu057412.1 Olea europaea HOM05D008780 ORTHO05D010894 1.7e-15 86.7 123 48.8
PGSC0003DMG400021889 Solanum tuberosum HOM05D008780 ORTHO05D010894 1.7e-15 86.7 124 43.5
Nitab4.5_0001118g0100 Nicotiana tabacum HOM05D008780 ORTHO05D010894 3.8e-15 85.5 124 46.8
Cc11_g11680 Coffea canephora HOM05D008780 ORTHO05D010894 5.0e-15 85.1 114 49.1
Sc23g0005060 Simmondsia chinensis HOM05D008780 ORTHO05D010894 8.6e-15 84.3 113 46.9
TAR622G0759 Trochodendron aralioides HOM05D008780 ORTHO05D010894 1.5e-14 83.6 112 42.0
Solyc01g010230.2 Solanum lycopersicum HOM05D008780 ORTHO05D010894 3.6e-13 79.0 121 41.3
Sopen01g005830 Solanum pennellii HOM05D008780 ORTHO05D010894 3.6e-13 79.0 121 41.3
Migut.L01168 Erythranthe guttata HOM05D008780 ORTHO05D010894 1.8e-12 76.6 122 44.3
Dinv34033 Davidia involucrata HOM05D008780 ORTHO05D010894 5.2e-12 75.1 109 46.8
DCAR_023744 Daucus carota HOM05D008780 ORTHO05D010894 8.9e-12 74.3 123 41.5
MSTRG.774 Avicennia marina HOM05D008780 ORTHO05D010894 1.2e-11 73.9 119 41.2
TAR721G0001 Trochodendron aralioides HOM05D008780 ORTHO05D010894 1.2e-11 73.9 112 42.0
Rhsim09G0124000 Rhododendron simsii HOM05D008780 ORTHO05D010894 3.4e-11 72.4 130 42.3
Cc11_g11670 Coffea canephora HOM05D008780 ORTHO05D010894 1.3e-10 70.5 126 41.3
Dinv20142 Davidia involucrata HOM05D008780 ORTHO05D010894 1.7e-10 70.1 101 46.5
Rhsim09G0124500 Rhododendron simsii HOM05D008780 ORTHO05D010894 4.9e-10 68.6 137 40.1
RhsimUnG0149700 Rhododendron simsii HOM05D008780 ORTHO05D010894 6.4e-10 68.2 130 40.8
Zm00001eb108780 Zea mays HOM05D008780 ORTHO05D010894 1.4e-09 67.0 87 46.0
Hma1.2p1_0473F.1_g160210 Hydrangea macrophylla HOM05D008780 ORTHO05D010894 3.2e-09 65.9 109 37.6
DCAR_023743 Daucus carota HOM05D008780 ORTHO05D010894 4.1e-09 65.5 92 40.2
Hma1.2p1_0473F.1_g160220 Hydrangea macrophylla HOM05D008780 ORTHO05D010894 5.4e-09 65.1 138 33.3
Lsat_1_v5_gn_4_25000 Lactuca sativa HOM05D008780 ORTHO05D010894 3.5e-08 62.4 95 37.9
Nitab4.5_0000509g0060 Nicotiana tabacum HOM05D008780 ORTHO05D010894 7.8e-08 61.2 100 46.0
DCAR_023868 Daucus carota HOM05D008780 ORTHO05D010894 1.7e-07 60.1 92 38.0
Rhsim09G0124400 Rhododendron simsii HOM05D008780 ORTHO05D010894 8.6e-07 57.8 141 39.0


User provided reference genes

Program Settings