Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0118800 Rhododendron simsii HOM05D008138 ORTHO05D010043 2.8e-58 228.4 117 100.0
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 4.4e-43 177.9 109 86.2
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 1.3e-15 86.7 85 50.6
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.6e-13 79.7 89 46.1
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 1.1e-12 77.0 109 42.2
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.1e-12 77.0 89 44.9
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 3.1e-12 75.5 88 50.0
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 5.8e-11 71.2 107 40.2
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 7.5e-11 70.9 85 41.2
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 9.9e-11 70.5 94 45.7
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 1.3e-10 70.1 85 35.3
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 2.2e-10 69.3 107 36.4
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 2.9e-10 68.9 83 37.3
QL08p042110 Quercus lobata HOM05D008138 ORTHO05D010043 4.9e-10 68.2 102 36.3
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 6.4e-10 67.8 85 42.4
Gorai.013G098900 Gossypium raimondii HOM05D033109 ORTHO05D010043 8.3e-10 67.4 64 53.1
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 1.1e-09 67.0 103 35.9
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 4.1e-09 65.1 64 56.2
QL10p055376 Quercus lobata HOM05D008138 ORTHO05D010043 4.1e-09 65.1 84 35.7
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 7.1e-09 64.3 111 38.7
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 1.2e-08 63.5 95 41.1
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 2.1e-08 62.8 83 41.0
Gohir.A13G091345 Gossypium hirsutum HOM05D033109 ORTHO05D010043 2.1e-08 62.8 56 55.4
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.5e-08 62.0 99 39.4
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.6e-08 61.6 104 37.5
QL10p055255 Quercus lobata HOM05D008138 ORTHO05D010043 6.0e-08 61.2 85 38.8
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.0e-07 60.5 81 40.7
QL10p054634 Quercus lobata HOM05D008138 ORTHO05D010043 1.0e-07 60.5 82 40.2
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 1.3e-07 60.1 110 40.0
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 2.3e-07 59.3 110 40.0
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.0e-07 58.9 101 33.7
Sabra13G0105400 Salix brachista HOM05D008138 ORTHO05D010043 3.0e-07 58.9 79 40.5
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.9e-07 58.5 104 36.5
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 3.9e-07 58.5 94 35.1
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.1e-07 58.2 98 37.8
QL10p055293 Quercus lobata HOM05D008138 ORTHO05D010043 5.1e-07 58.2 84 32.1
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 8.6e-07 57.4 100 37.0
QL10p055147 Quercus lobata HOM05D008138 ORTHO05D010043 8.6e-07 57.4 85 34.1
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.1e-06 57.0 100 36.0
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.1e-06 57.0 100 36.0
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.1e-06 57.0 94 34.0
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.5e-06 56.6 104 36.5
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.5e-06 56.6 104 35.6
QL10p055198 Quercus lobata HOM05D008138 ORTHO05D010043 1.9e-06 56.2 83 36.1
PGSC0003DMG400007527 Solanum tuberosum HOM05D031546 ORTHO05D030641 1.9e-06 56.2 83 39.8
Prupe.1G297700 Prunus persica HOM05D008138 ORTHO05D010043 2.5e-06 55.8 85 38.8
Sc11g0003020 Simmondsia chinensis HOM05D049521 ORTHO05D010043 2.5e-06 55.8 86 38.4
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 3.3e-06 55.5 94 34.0
Sc11g0003000 Simmondsia chinensis HOM05D049521 ORTHO05D010043 4.3e-06 55.1 97 35.1
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 7.3e-06 54.3 99 34.3
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 9.5e-06 53.9 86 33.7


User provided reference genes

Program Settings