Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 3.7e-103 378.3 196 100.0
Rhsim09G0118800 Rhododendron simsii HOM05D008138 ORTHO05D010043 1.3e-42 177.2 109 86.2
Rhsim09G0041600 Rhododendron simsii HOM05D000139 ORTHO05D000103 4.2e-22 109.0 59 91.5
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 1.6e-13 80.5 87 46.0
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 2.1e-13 80.1 87 49.4
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 3.6e-13 79.3 86 44.2
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 4.6e-13 79.0 108 41.7
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 5.1e-12 75.5 103 37.9
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 8.8e-12 74.7 109 38.5
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 8.8e-12 74.7 108 37.0
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 1.5e-11 73.9 109 36.7
QL08p042110 Quercus lobata HOM05D008138 ORTHO05D010043 4.3e-11 72.4 142 28.9
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 9.7e-11 71.2 90 37.8
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 1.7e-10 70.5 110 39.1
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 2.2e-10 70.1 109 35.8
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 8.2e-10 68.2 87 41.4
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 8.2e-10 68.2 84 36.9
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.1e-09 66.2 118 33.9
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 4.1e-09 65.9 100 40.0
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.9e-09 65.1 103 38.8
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.9e-09 65.1 100 38.0
Gorai.013G098900 Gossypium raimondii HOM05D033109 ORTHO05D010043 9.1e-09 64.7 60 50.0
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.2e-08 64.3 103 38.8
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 1.2e-08 64.3 92 43.5
Rhsim12G0189600 Rhododendron simsii HOM05D034787 ORTHO05D020832 2.0e-08 63.5 65 49.2
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 2.6e-08 63.2 63 52.4
Sabra13G0105400 Salix brachista HOM05D008138 ORTHO05D010043 2.6e-08 63.2 117 32.5
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 3.4e-08 62.8 110 40.0
QL10p055376 Quercus lobata HOM05D008138 ORTHO05D010043 4.5e-08 62.4 84 35.7
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.9e-08 62.0 103 37.9
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.3e-07 60.8 103 37.9
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.7e-07 60.5 103 36.9
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.7e-07 60.5 103 36.9
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.2e-07 60.1 103 37.9
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.2e-07 60.1 101 36.6
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.2e-07 60.1 103 36.9
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 2.2e-07 60.1 83 39.8
Gohir.A13G091345 Gossypium hirsutum HOM05D033109 ORTHO05D010043 2.9e-07 59.7 56 50.0
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 3.8e-07 59.3 99 42.4
Prupe.1G297700 Prunus persica HOM05D008138 ORTHO05D010043 3.8e-07 59.3 87 37.9
QL10p055147 Quercus lobata HOM05D008138 ORTHO05D010043 6.5e-07 58.5 85 32.9
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 8.5e-07 58.2 109 36.7
QL10p055293 Quercus lobata HOM05D008138 ORTHO05D010043 3.2e-06 56.2 74 33.8
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 4.2e-06 55.8 110 30.9
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 4.2e-06 55.8 85 36.5
QL10p054634 Quercus lobata HOM05D008138 ORTHO05D010043 4.2e-06 55.8 86 36.0
QL10p055255 Quercus lobata HOM05D008138 ORTHO05D010043 5.5e-06 55.5 85 35.3
Ciclev10033630m.g Citrus clementina HOM05D008138 ORTHO05D010043 7.2e-06 55.1 96 32.3
PGSC0003DMG400007527 Solanum tuberosum HOM05D031546 ORTHO05D030641 7.2e-06 55.1 98 34.7


User provided reference genes

Program Settings