Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.2e-162 575.1 306 100.0
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 5.9e-156 554.3 306 97.4
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 8.3e-102 374.4 342 67.3
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.7e-91 340.1 251 74.5
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 6.2e-89 331.6 312 62.2
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.3e-86 323.9 270 67.8
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 2.2e-86 323.2 289 65.1
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 9.3e-85 317.8 306 60.8
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.7e-84 316.2 212 75.9
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 7.8e-84 314.7 315 58.7
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 1.3e-83 313.9 306 60.5
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 2.3e-83 313.2 304 59.5
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 6.6e-83 311.6 301 60.5
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 8.7e-83 311.2 305 60.0
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 8.7e-83 311.2 302 61.3
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 1.1e-82 310.8 298 59.7
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 4.3e-82 308.9 309 59.2
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 9.6e-82 307.8 300 61.3
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.3e-81 307.4 300 59.3
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.3e-81 307.4 245 68.6
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 3.6e-81 305.8 313 60.4
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 4.8e-81 305.4 213 74.2
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 3.1e-80 302.8 313 57.8
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.0e-80 302.4 302 59.6
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 6.9e-80 301.6 300 58.7
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 6.9e-80 301.6 300 58.7
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 9.0e-80 301.2 310 57.1
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 9.0e-80 301.2 312 57.4
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.2e-79 300.8 301 59.5
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.5e-79 300.4 303 58.4
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 2.0e-79 300.1 313 56.2
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.7e-78 297.0 279 61.3
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.7e-78 297.0 287 59.2
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.7e-78 297.0 302 59.3
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.9e-78 296.2 265 63.4
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 6.4e-78 295.0 285 61.4
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 8.4e-78 294.7 307 54.7
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 8.4e-78 294.7 305 59.3
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 4.2e-77 292.4 300 59.3
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 7.1e-77 291.6 241 61.8
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.2e-76 290.8 300 55.0
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.2e-76 290.8 309 57.0
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 1.2e-76 290.8 285 59.3
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.2e-76 290.8 274 60.9
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 2.7e-76 289.7 231 65.8
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.3e-75 287.3 264 61.0
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 3.9e-75 285.8 306 55.2
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 3.9e-75 285.8 302 54.3
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 5.1e-75 285.4 232 65.5
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 8.7e-75 284.6 288 58.3
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 8.7e-75 284.6 266 59.0
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.5e-74 283.9 275 57.1
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.5e-74 283.1 276 57.6
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 4.3e-74 282.3 289 57.4
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 5.6e-74 282.0 220 66.8
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 7.4e-74 281.6 193 75.6
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.6e-73 280.4 302 56.3
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 1.6e-73 280.4 288 56.9
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.8e-73 279.6 308 56.2
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 6.2e-73 278.5 251 63.7
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 8.1e-73 278.1 316 54.7
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.1e-72 277.7 253 63.2
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 9.0e-72 274.6 265 62.6
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.2e-71 274.2 265 62.3
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.5e-71 273.9 277 58.5
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 1.5e-71 273.9 396 47.7
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 2.0e-71 273.5 288 55.9
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 6.4e-70 268.5 325 52.0
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 4.2e-69 265.8 283 55.8
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 7.1e-69 265.0 316 53.5
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 1.2e-68 264.2 175 76.6
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.1e-68 263.5 303 53.5
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 4.6e-68 262.3 285 55.4
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 6.0e-68 261.9 303 53.5
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.0e-67 261.2 347 50.4
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 6.7e-67 258.5 287 54.7
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 6.7e-67 258.5 313 49.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.5e-66 257.3 303 53.1
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 4.3e-66 255.8 189 72.5
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 7.4e-66 255.0 234 57.3
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 7.4e-66 255.0 208 61.5
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.1e-65 253.4 287 54.0
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.4e-64 250.8 263 57.4
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.2e-63 247.7 223 57.8
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 2.0e-63 246.9 246 58.1
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 4.5e-63 245.7 282 53.5
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 3.8e-62 242.7 250 55.6
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.9e-61 240.4 250 55.2
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 4.2e-61 239.2 218 60.1
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 4.2e-61 239.2 174 71.3
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 7.1e-61 238.4 252 57.1
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 9.3e-61 238.0 202 59.4
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 6.1e-60 235.3 326 48.5
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 6.3e-57 225.3 272 52.9
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.8e-56 223.8 176 70.5
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.7e-54 217.2 221 57.9
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.1e-53 214.5 227 56.4
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 7.9e-52 208.4 163 69.9
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.5e-50 203.4 136 77.2
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.4e-48 197.6 218 54.6
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.4e-48 197.6 202 56.9
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 1.1e-45 188.0 200 59.0
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.9e-45 187.2 218 52.3
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 7.9e-44 181.8 229 49.8
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 2.3e-43 180.3 218 44.0
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 5.9e-39 165.6 143 57.3
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 7.7e-39 165.2 259 45.6
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 7.7e-39 165.2 196 55.6
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.7e-38 164.1 290 42.1
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 3.8e-38 162.9 114 71.1
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 4.2e-37 159.5 194 45.4
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.1e-34 151.4 171 56.7
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 6.5e-30 135.6 116 59.5
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 3.5e-23 113.2 123 54.5
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 2.9e-22 110.2 181 38.1
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 9.4e-21 105.1 176 34.1
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 1.1e-16 91.7 192 32.8
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.1e-16 91.7 103 53.4
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 4.2e-13 79.7 69 62.3
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 3.6e-12 76.6 88 52.3
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 2.0e-10 70.9 53 66.0
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 8.3e-09 65.5 42 76.2


User provided reference genes

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