Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0108600 Rhododendron simsii HOM05D007913 ORTHO05D009599 6.6e-137 490.7 252 100.0
Rhsim09G0108800 Rhododendron simsii HOM05D007913 ORTHO05D009599 1.0e-36 157.9 118 74.6
vmacro23289 Vaccinium macrocarpon HOM05D007913 ORTHO05D009599 1.5e-27 127.5 120 66.7
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 5.6e-27 125.6 127 63.0
vmacro23288 Vaccinium macrocarpon HOM05D007913 ORTHO05D009599 3.9e-20 102.8 119 59.7
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 1.4e-17 94.4 114 54.4
Rhsim09G0201400 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.2e-17 92.4 111 54.1
Rhsim01G0098600 Rhododendron simsii HOM05D008549 ORTHO05D009599 5.8e-16 89.0 60 78.3
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.8e-16 89.0 62 74.2
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 1.3e-15 87.8 116 57.8
Rhsim01G0079600 Rhododendron simsii HOM05D008549 ORTHO05D009599 2.9e-15 86.7 52 84.6
Rhsim12G0123800 Rhododendron simsii HOM05D000323 ORTHO05D000201 2.9e-15 86.7 59 74.6
Rhsim12G0160000 Rhododendron simsii HOM05D008549 ORTHO05D030004 6.4e-15 85.5 53 81.1
Migut.E00331 Erythranthe guttata HOM05D007913 ORTHO05D009599 4.1e-14 82.8 118 53.4
Rhsim09G0134800 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.1e-14 82.8 55 78.2
Oeu009783.1 Olea europaea HOM05D007913 ORTHO05D009599 7.1e-14 82.0 114 47.4
Oeu039264.1 Olea europaea HOM05D007913 ORTHO05D009599 9.2e-14 81.6 128 46.1
Cc00_g12370 Coffea canephora HOM05D007913 ORTHO05D009599 1.2e-13 81.3 130 50.0
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 1.6e-13 80.9 114 51.8
RhsimUnG0192100 Rhododendron simsii HOM05D008549 ORTHO05D000001 2.1e-13 80.5 65 66.2
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.7e-13 80.1 117 50.4
Rhsim01G0041200 Rhododendron simsii HOM05D000741 ORTHO05D000506 7.8e-13 78.6 58 70.7
Nitab4.5_0003330g0030 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.7e-12 77.4 118 48.3
Thecc.02G356200 Theobroma cacao HOM05D007913 ORTHO05D009599 2.3e-12 77.0 115 53.0
RcHm_v2.0_Chr4g0435341 Rosa chinensis HOM05D007913 ORTHO05D009599 6.6e-12 75.5 114 47.4
QL01p043366 Quercus lobata HOM05D007913 ORTHO05D009599 3.3e-11 73.2 127 46.5
Nitab4.5_0000874g0170 Nicotiana tabacum HOM05D007913 ORTHO05D009599 5.6e-11 72.4 121 47.9
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 5.6e-11 72.4 111 48.6
FvH4_4g27520 Fragaria vesca HOM05D007913 ORTHO05D009599 7.3e-11 72.0 111 46.8
FAN12G2484 Fragaria x ananassa HOM05D007913 ORTHO05D009599 7.3e-11 72.0 111 46.8
FAN12G3451 Fragaria x ananassa HOM05D007913 ORTHO05D009599 7.3e-11 72.0 111 46.8
Oeu027679.1 Olea europaea HOM05D007913 ORTHO05D009599 7.3e-11 72.0 122 45.9
Oeu027681.1 Olea europaea HOM05D007913 ORTHO05D009599 7.3e-11 72.0 122 45.9
FAN22G1199 Fragaria x ananassa HOM05D007913 ORTHO05D009599 1.2e-10 71.2 111 47.7
MSTRG.13522 Avicennia marina HOM05D007913 ORTHO05D009599 2.8e-10 70.1 123 43.9
Dinv21098 Davidia involucrata HOM05D007913 ORTHO05D009599 2.8e-10 70.1 95 49.5
Cfa000683 Carpinus fangiana HOM05D007913 ORTHO05D009599 3.6e-10 69.7 110 50.0
Ciclev10033073m.g Citrus clementina HOM05D007913 ORTHO05D009599 4.7e-10 69.3 127 43.3
Duzib268G1152 Durio zibethinus HOM05D013794 ORTHO05D009599 4.7e-10 69.3 111 43.2
FAN07G1066 Fragaria x ananassa HOM05D007913 ORTHO05D009599 4.7e-10 69.3 111 45.9
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 6.2e-10 68.9 113 46.9
Nitab4.5_0000874g0150 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.1e-09 68.2 118 44.9
Prupe.1G309800 Prunus persica HOM05D007913 ORTHO05D009599 1.1e-09 68.2 119 45.4
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 1.4e-09 67.8 117 46.2
Potri.010G125900 Populus trichocarpa HOM05D007913 ORTHO05D009599 1.8e-09 67.4 117 42.7
Rhsim12G0118200 Rhododendron simsii HOM05D000812 ORTHO05D000672 2.3e-09 67.0 46 73.9
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.3e-09 67.0 114 47.4
Potri.008G119900 Populus trichocarpa HOM05D013794 ORTHO05D009599 5.2e-09 65.9 116 39.7
Peaxi162Scf00382g00026 Petunia axillaris HOM05D007913 ORTHO05D009599 6.8e-09 65.5 117 42.7
MSTRG.13523 Avicennia marina HOM05D007913 ORTHO05D009599 1.5e-08 64.3 116 42.2
Atru.chr11.1276 Acer truncatum HOM05D007913 ORTHO05D009599 2.0e-08 63.9 122 42.6
Haze_06126 Corylus avellana HOM05D007913 ORTHO05D009599 2.0e-08 63.9 118 44.1
MSTRG.2240 Avicennia marina HOM05D007913 ORTHO05D009599 7.6e-08 62.0 121 44.6
MSTRG.832 Avicennia marina HOM05D007913 ORTHO05D009599 7.6e-08 62.0 119 39.5
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 7.6e-08 62.0 108 48.1
MD13G1042800 Malus domestica HOM05D007913 ORTHO05D009599 1.7e-07 60.8 120 45.8
Thecc.03G034200 Theobroma cacao HOM05D021252 ORTHO05D012395 2.2e-07 60.5 123 40.7
MSTRG.2241 Avicennia marina HOM05D007913 ORTHO05D009599 2.9e-07 60.1 121 42.1
CiPaw.16G064400 Carya illinoinensis HOM05D007913 ORTHO05D009599 3.7e-07 59.7 131 41.2
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 4.9e-07 59.3 136 39.7
Atru.chr11.1275 Acer truncatum HOM05D007913 ORTHO05D009599 6.4e-07 58.9 113 39.8
MSTRG.13526 Avicennia marina HOM05D007913 ORTHO05D009599 6.4e-07 58.9 114 38.6
Nitab4.5_0000057g0320 Nicotiana tabacum HOM05D007913 ORTHO05D009599 6.4e-07 58.9 121 42.1
Migut.E00332 Erythranthe guttata HOM05D007913 ORTHO05D009599 1.1e-06 58.2 121 43.0
Nn4g23816 Nelumbo nucifera HOM05D007913 ORTHO05D009599 1.1e-06 58.2 131 44.3
SalBow8G2445 Salvia bowleyana HOM05D007913 ORTHO05D009599 1.1e-06 58.2 86 47.7
Ciclev10033117m.g Citrus clementina HOM05D013794 ORTHO05D009599 1.4e-06 57.8 115 39.1
MBI16_g11028_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 1.4e-06 57.8 135 37.8
RcHm_v2.0_Chr4g0435331 Rosa chinensis HOM05D007913 ORTHO05D009599 1.4e-06 57.8 118 38.1
Actinidia18937 Actinidia chinensis HOM05D010627 ORTHO05D009599 2.4e-06 57.0 108 43.5
Lsat_1_v5_gn_4_18140 Lactuca sativa HOM05D067616 ORTHO05D048360 2.4e-06 57.0 123 35.8
Aqoxy3G00317 Aquilegia oxysepala HOM05D007913 ORTHO05D009599 3.2e-06 56.6 114 40.4
Manes.01G012300 Manihot esculenta HOM05D021252 ORTHO05D012395 3.2e-06 56.6 115 39.1
Nitab4.5_0003330g0020 Nicotiana tabacum HOM05D007913 ORTHO05D009599 3.2e-06 56.6 121 39.7
CiPaw.16G064300 Carya illinoinensis HOM05D007913 ORTHO05D009599 7.1e-06 55.5 128 39.1
DCAR_030070 Daucus carota HOM05D007913 ORTHO05D009599 9.2e-06 55.1 120 44.2
Duzib251G0161 Durio zibethinus HOM05D013794 ORTHO05D009599 9.2e-06 55.1 114 44.7
Thecc.02G356100 Theobroma cacao HOM05D013794 ORTHO05D009599 9.2e-06 55.1 113 44.2


User provided reference genes

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