Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0093900 Rhododendron simsii HOM05D007477 ORTHO05D009428 1.7e-103 379.4 198 100.0
vmacro10662 Vaccinium macrocarpon HOM05D007477 ORTHO05D009428 1.3e-76 290.0 198 79.8
Actinidia36649 Actinidia chinensis HOM05D007477 ORTHO05D009428 8.4e-63 244.2 189 70.4
Dinv28044 Davidia involucrata HOM05D007477 ORTHO05D009428 1.9e-54 216.5 179 62.6
Actinidia12373 Actinidia chinensis HOM05D007477 ORTHO05D009428 3.0e-52 209.1 158 66.5
QL03p033890 Quercus lobata HOM05D007477 ORTHO05D009428 8.7e-52 207.6 193 59.6
GSVIVG01011707001 Vitis vinifera HOM05D007477 ORTHO05D009428 1.1e-51 207.2 179 59.8
Lj3A866T67 Lonicera japonica HOM05D007477 ORTHO05D009428 4.3e-51 205.3 182 61.0
CiPaw.06G048300 Carya illinoinensis HOM05D007477 ORTHO05D009428 2.2e-50 203.0 179 62.6
Prupe.1G330000 Prunus persica HOM05D007477 ORTHO05D009428 4.8e-50 201.8 179 59.8
DCAR_023590 Daucus carota HOM05D007477 ORTHO05D009428 4.1e-49 198.7 190 60.0
Duzib251G0266 Durio zibethinus HOM05D007477 ORTHO05D009428 1.2e-48 197.2 193 54.9
Sed0009759 Sechium edule HOM05D007477 ORTHO05D009428 1.2e-48 197.2 193 55.4
Manes.15G131100 Manihot esculenta HOM05D007477 ORTHO05D009428 2.0e-48 196.4 190 57.4
Ciclev10016822m.g Citrus clementina HOM05D007477 ORTHO05D009428 2.6e-48 196.1 180 57.2
CsaV3_5G028340 Cucumis sativus L. HOM05D005212 ORTHO05D006353 1.7e-47 193.4 196 53.6
ECA233G5235 Erigeron canadensis HOM05D007477 ORTHO05D009428 2.9e-47 192.6 181 58.6
Thecc.02G287400 Theobroma cacao HOM05D007477 ORTHO05D009428 2.9e-47 192.6 198 53.5
Atru.chr11.654 Acer truncatum HOM05D007477 ORTHO05D009428 5.0e-47 191.8 190 58.4
arahy.Tifrunner.gnm1.ann1.4G9RAC Arachis hypogaea HOM05D007477 ORTHO05D009428 6.5e-47 191.4 200 54.0
arahy.Tifrunner.gnm1.ann1.KUTA9A Arachis hypogaea HOM05D007477 ORTHO05D009428 6.5e-47 191.4 200 54.0
Cpa.g.sc1084.2 Carica papaya HOM05D007477 ORTHO05D009428 6.5e-47 191.4 184 58.2
Cfa014979 Carpinus fangiana HOM05D007477 ORTHO05D009428 6.5e-47 191.4 181 57.5
Lalb_Chr07g0187731 Lupinus albus HOM05D007477 ORTHO05D009428 1.4e-46 190.3 191 51.8
Peaxi162Scf00376g00125 Petunia axillaris HOM05D007477 ORTHO05D009428 9.4e-46 187.6 185 57.3
Potri.010G110400 Populus trichocarpa HOM05D007477 ORTHO05D009428 2.1e-45 186.4 188 58.5
Gohir.D02G141700 Gossypium hirsutum HOM05D007477 ORTHO05D009428 4.6e-45 185.3 191 52.9
Gorai.005G159500 Gossypium raimondii HOM05D007477 ORTHO05D009428 1.4e-44 183.7 191 57.1
Nitab4.5_0002473g0010 Nicotiana tabacum HOM05D007477 ORTHO05D009428 1.4e-44 183.7 176 58.5
Gohir.A03G118700 Gossypium hirsutum HOM05D007477 ORTHO05D009428 1.8e-44 183.3 193 52.8
Migut.L00398 Erythranthe guttata HOM05D007477 ORTHO05D009428 2.3e-44 183.0 195 56.9
Lsat_1_v5_gn_8_44241 Lactuca sativa HOM05D007477 ORTHO05D009428 2.3e-44 183.0 179 55.3
HanXRQChr12g0363541 Helianthus annuus HOM05D007477 ORTHO05D009428 3.0e-44 182.6 198 54.0
SalBow8G0293 Salvia bowleyana HOM05D007477 ORTHO05D009428 3.0e-44 182.6 186 54.8
Psat7g082600 Pisum sativum HOM05D007477 ORTHO05D009428 3.9e-44 182.2 194 50.0
MELO3C005297.2 Cucumis melo HOM05D007477 ORTHO05D009428 1.1e-43 180.6 137 62.0
Nn4g24250 Nelumbo nucifera HOM05D007477 ORTHO05D009428 1.1e-43 180.6 178 54.5
Ca_11592_v3 Cicer arietinum L. HOM05D007477 ORTHO05D009428 7.4e-43 177.9 198 48.5
Nitab4.5_0003022g0050 Nicotiana tabacum HOM05D007477 ORTHO05D009428 2.2e-42 176.4 186 54.8
Lj4g0016169 Lotus japonicus HOM05D007477 ORTHO05D009428 3.7e-42 175.6 190 48.9
AL2G30200 Arabidopsis lyrata HOM05D007477 ORTHO05D009428 6.3e-42 174.9 198 49.0
CANSAT01G0728 Cannabis sativa HOM05D007477 ORTHO05D009428 6.3e-42 174.9 183 53.0
Cc11_g08270 Coffea canephora HOM05D007477 ORTHO05D009428 6.3e-42 174.9 174 55.7
Eucgr.G02161 Eucalyptus grandis HOM05D007477 ORTHO05D009428 8.2e-42 174.5 173 57.8
Glyma.05G139800 Glycine max HOM05D007477 ORTHO05D009428 1.4e-41 173.7 189 50.8
Phvul.002G183200 Phaseolus vulgaris HOM05D007477 ORTHO05D009428 3.1e-41 172.6 190 50.0
RcHm_v2.0_Chr4g0443591 Rosa chinensis HOM05D007477 ORTHO05D009428 5.3e-41 171.8 175 54.9
PGR004G1414 Punica granatum HOM05D007477 ORTHO05D009428 2.0e-40 169.9 124 66.9
BcaC08g46513 Brassica carinata HOM05D007477 ORTHO05D009428 7.7e-40 167.9 201 46.3
AT1G70760 Arabidopsis thaliana HOM05D007477 ORTHO05D009428 1.0e-39 167.5 198 46.5
VMungo0251G0485 Vigna mungo HOM05D007477 ORTHO05D009428 1.0e-39 167.5 190 48.4
TWI74G0372 Tripterygium wilfordii HOM05D007477 ORTHO05D009428 1.3e-39 167.2 197 48.7
MSTRG.7617 Avicennia marina HOM05D007477 ORTHO05D009428 1.7e-39 166.8 182 50.0
A07p37160 Brassica napus HOM05D007477 ORTHO05D009428 1.7e-39 166.8 199 46.2
Carub.0002s1750 Capsella rubella HOM05D007477 ORTHO05D009428 1.7e-39 166.8 198 46.5
unitig_26.g9564 Utricularia gibba HOM05D000544 ORTHO05D009428 2.2e-39 166.4 180 50.0
MBI12_g05373_MAGBIO Magnolia biondii HOM05D007477 ORTHO05D009428 3.8e-39 165.6 163 53.4
PGSC0003DMG400015900 Solanum tuberosum HOM05D007477 ORTHO05D009428 3.8e-39 165.6 177 52.5
Sopen05g023010 Solanum pennellii HOM05D007477 ORTHO05D002065 8.5e-39 164.5 179 52.5
BraA02t06739Z Brassica rapa HOM05D007477 ORTHO05D009428 1.1e-38 164.1 196 45.4
BraA07t31278Z Brassica rapa HOM05D007477 ORTHO05D009428 1.4e-38 163.7 199 45.2
CDE05G1013 Ceratophyllum demersum HOM05D007477 ORTHO05D009428 1.4e-38 163.7 172 52.3
CARHR064020 Cardamine hirsuta HOM05D007477 ORTHO05D009428 1.9e-38 163.3 199 45.7
Thhalv10019160m.g Eutrema salsugineum HOM05D007477 ORTHO05D009428 1.9e-38 163.3 204 44.1
BcaC03g15231 Brassica carinata HOM05D007477 ORTHO05D009428 2.5e-38 162.9 196 44.9
C02p28170 Brassica napus HOM05D007477 ORTHO05D009428 2.5e-38 162.9 196 44.9
C06p44830 Brassica napus HOM05D007477 ORTHO05D009428 2.5e-38 162.9 200 46.0
BolC2t08861H Brassica oleracea HOM05D007477 ORTHO05D009428 2.5e-38 162.9 196 44.9
Solyc05g026550.3 Solanum lycopersicum HOM05D007477 ORTHO05D009428 3.2e-38 162.5 179 52.0
BolC6t39542H Brassica oleracea HOM05D007477 ORTHO05D009428 4.2e-38 162.2 200 45.5
BcaB05g24610 Brassica carinata HOM05D007477 ORTHO05D009428 9.4e-38 161.0 192 44.8
A02p16850 Brassica napus HOM05D007477 ORTHO05D009428 1.2e-37 160.6 196 44.9
FvH4_4g34090 Fragaria vesca HOM05D007477 ORTHO05D009428 1.2e-37 160.6 175 51.4
FAN07G0335 Fragaria x ananassa HOM05D007477 ORTHO05D009428 1.6e-37 160.2 184 51.6
Sp5g25940 Schrenkiella parvula HOM05D007477 ORTHO05D009428 1.6e-37 160.2 197 46.2
CAN.G439.27 Capsicum annuum HOM05D007477 ORTHO05D009428 2.1e-37 159.8 180 52.2
FAN12G2365 Fragaria x ananassa HOM05D007477 ORTHO05D009428 6.1e-37 158.3 175 50.9
PSO478G2137 Papaver somniferum HOM05D007477 ORTHO05D009428 6.1e-37 158.3 179 52.0
ClCG01G006330 Citrullus lanatus HOM05D007477 ORTHO05D009428 1.4e-36 157.1 194 47.4
THA.LOC104823000 Tarenaya hassleriana HOM05D007477 ORTHO05D009428 1.8e-36 156.8 117 61.5
Aa31LG4G10230 Aethionema arabicum HOM05D007477 ORTHO05D009428 3.0e-36 156.0 184 48.4
FAN17G0828 Fragaria x ananassa HOM05D007477 ORTHO05D009428 3.9e-36 155.6 175 50.3
AUR62014194 Chenopodium quinoa HOM05D007477 ORTHO05D009428 8.8e-36 154.5 163 52.1
Aqoxy3G00052 Aquilegia oxysepala HOM05D007477 ORTHO05D009428 4.4e-35 152.1 173 50.3
Haze_10942 Corylus avellana HOM05D007477 ORTHO05D009428 7.0e-33 144.8 180 49.4
Zm00001eb312390 Zea mays HOM05D007477 ORTHO05D009428 3.6e-29 132.5 175 41.7
Glyma.08G095100 Glycine max HOM05D007477 ORTHO05D009428 8.0e-29 131.3 190 44.7
EL10Ac9g22714 Beta vulgaris HOM05D007477 ORTHO05D009428 1.0e-28 131.0 178 44.4
ATR0564G098 Amborella trichopoda HOM05D007477 ORTHO05D009428 5.2e-28 128.6 128 52.3
Zm00001eb099410 Zea mays HOM05D007477 ORTHO05D009428 1.1e-27 127.5 104 54.8
MD16G1022900 Malus domestica HOM05D007477 ORTHO05D009428 2.0e-27 126.7 142 52.8
Ah.01g007630 Amaranthus hybridus HOM05D007477 ORTHO05D009428 2.8e-26 122.9 179 45.3
Os05g0348100 Oryza sativa ssp. japonica HOM05D007477 ORTHO05D009428 1.2e-21 107.5 64 65.6
SEGI_14142 Sequoiadendron giganteum HOM05D007477 ORTHO05D009428 5.2e-20 102.1 111 47.7
MD13G1021900 Malus domestica HOM05D007477 ORTHO05D009428 3.7e-18 95.9 95 57.9
Pp3c24_18490 Physcomitrium patens HOM05D007477 ORTHO05D009428 3.5e-16 89.4 70 61.4
Mapoly0003s0200 Marchantia polymorpha HOM05D007477 ORTHO05D009428 7.7e-16 88.2 64 64.1
FAN22G0194 Fragaria x ananassa HOM05D007477 ORTHO05D009428 1.8e-12 77.0 175 34.3
AagrBONN_evm.TU.Sc2ySwM_344.2533 Anthoceros agrestis HOM05D007477 ORTHO05D009428 4.4e-11 72.4 63 54.0
COL.COLO4_13101 Corchorus olitorius HOM05D007477 ORTHO05D009428 5.7e-11 72.0 115 43.5
AUR62039526 Chenopodium quinoa HOM05D007477 ORTHO05D009428 6.3e-10 68.6 177 31.6
Sabra10G0080700 Salix brachista HOM05D007477 ORTHO05D009428 5.4e-09 65.5 108 40.7
SEGI_21620 Sequoiadendron giganteum HOM05D002696 ORTHO05D009428 2.7e-08 63.2 87 40.2
TAR622G1153 Trochodendron aralioides HOM05D007477 ORTHO05D009428 2.7e-08 63.2 65 56.9


User provided reference genes

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