Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 0.0e+00 1632.5 878 100.0
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 0.0e+00 1078.2 866 72.7
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 1.3e-288 996.5 891 64.6
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 2.1e-283 979.2 899 63.8
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 8.7e-253 877.5 894 58.4
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 9.6e-252 874.0 809 62.7
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 8.1e-251 870.9 907 57.7
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.3e-248 863.6 891 57.5
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 4.6e-246 855.1 899 57.0
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.0e-245 854.0 908 58.4
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 1.3e-245 853.6 907 56.9
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 8.7e-245 850.9 810 60.5
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 1.5e-244 850.1 844 58.5
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 5.7e-244 848.2 884 57.2
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 2.8e-243 845.9 810 60.7
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 6.3e-243 844.7 906 55.6
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.4e-242 842.8 890 55.7
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 2.9e-240 835.9 964 53.9
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.1e-239 833.9 897 56.0
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 1.1e-236 823.9 905 55.2
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 9.7e-236 820.8 885 57.5
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 4.1e-234 815.5 845 58.0
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.2e-233 813.9 795 58.2
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 1.7e-232 810.1 811 58.1
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 3.8e-232 808.9 842 56.3
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 1.1e-231 807.4 897 55.1
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 7.9e-230 801.2 836 57.3
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.4e-229 800.4 850 56.6
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 1.4e-229 800.4 795 57.7
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 2.0e-228 796.6 805 57.9
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 7.4e-228 794.7 798 58.5
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.7e-227 793.5 787 57.7
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 6.3e-227 791.6 866 56.0
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.1e-226 790.8 871 55.2
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 5.9e-225 785.0 850 55.8
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 1.7e-224 783.5 890 53.8
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 8.8e-221 771.2 848 55.4
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.5e-220 770.4 894 53.0
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 3.7e-219 765.8 812 56.8
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 4.1e-218 762.3 823 54.8
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 4.1e-218 762.3 900 52.6
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 2.0e-217 760.0 816 56.2
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 5.9e-217 758.4 794 56.9
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 7.7e-217 758.1 830 53.7
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 2.5e-215 753.1 839 54.0
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.6e-214 750.4 855 52.6
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 6.7e-213 745.0 842 54.0
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 5.7e-212 741.9 756 57.8
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 8.2e-211 738.0 843 53.9
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 3.2e-207 726.1 802 52.4
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 5.5e-207 725.3 810 53.5
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 7.2e-207 724.9 916 49.9
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 7.2e-207 724.9 817 54.0
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 2.7e-206 723.0 841 53.9
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 2.7e-206 723.0 839 52.4
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 1.8e-205 720.3 807 53.3
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.3e-205 719.9 816 53.6
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.0e-205 719.5 895 50.3
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 8.8e-205 718.0 806 54.1
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 8.8e-205 718.0 809 52.8
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 2.0e-204 716.8 823 52.2
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 2.2e-203 713.4 807 52.9
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 8.3e-203 711.4 809 52.5
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 8.3e-203 711.4 855 50.4
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 8.3e-203 711.4 813 52.2
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 3.1e-202 709.5 793 54.2
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 1.2e-201 707.6 808 51.7
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 3.5e-201 706.1 802 51.5
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 3.5e-201 706.1 808 51.4
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 5.9e-201 705.3 836 52.0
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 5.9e-201 705.3 931 49.6
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 7.7e-201 704.9 813 51.3
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 5.0e-200 702.2 811 51.5
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 1.1e-199 701.0 868 49.9
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 3.2e-199 699.5 858 51.5
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 1.6e-198 697.2 810 52.1
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 4.0e-197 692.6 804 51.5
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 3.4e-196 689.5 840 51.5
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 7.5e-196 688.3 842 51.2
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 9.8e-196 688.0 818 52.2
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 2.2e-187 660.2 813 50.9
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 6.6e-184 648.7 730 53.2
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.5e-180 637.5 750 52.0
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.0e-177 627.1 806 48.6
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 6.8e-173 612.1 823 46.4
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 4.4e-172 609.4 755 48.7
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 4.4e-164 582.8 871 45.4
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.9e-162 577.4 524 62.6
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.2e-153 548.1 806 45.2
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 1.6e-153 547.7 595 55.1
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 2.1e-153 547.4 588 53.2
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.8e-150 537.0 614 53.6
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 3.8e-147 526.6 623 52.3
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.2e-140 505.0 662 48.0
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 4.2e-138 496.5 634 49.7
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 3.8e-131 473.4 525 52.0
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 2.8e-126 457.2 668 45.4
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 6.3e-126 456.1 623 48.3
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 6.9e-125 452.6 519 51.1
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 1.1e-119 435.3 519 49.9
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 9.7e-119 432.2 895 38.3
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 3.6e-97 360.5 824 32.6
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 3.3e-82 310.8 284 63.7
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 2.8e-73 281.2 890 30.2
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.3e-70 272.3 313 54.0
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 1.9e-66 258.5 383 41.0
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 5.6e-66 256.9 272 52.6
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 1.6e-60 238.8 207 66.2
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 3.5e-60 237.7 235 60.4
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 1.8e-56 225.3 663 28.7
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 7.1e-53 213.4 269 48.0
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 1.6e-49 202.2 280 47.5
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 4.3e-42 177.6 901 24.1
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 1.1e-24 119.8 148 48.0
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 3.1e-16 91.7 139 40.3
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 7.6e-15 87.0 102 49.0
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 5.5e-13 80.9 88 50.0
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 6.1e-12 77.4 66 62.1
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 3.3e-10 71.6 125 38.4


User provided reference genes

Program Settings