Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0083700 Rhododendron simsii HOM05D017760 ORTHO05D004107 8.1e-105 384.0 236 100.0
RhsimUnG0197100 Rhododendron simsii HOM05D017760 ORTHO05D004107 4.7e-52 208.8 238 61.8
RhsimUnG0221800 Rhododendron simsii HOM05D017760 ORTHO05D004107 3.0e-51 206.1 238 61.3
Rhsim09G0032500 Rhododendron simsii HOM05D017760 ORTHO05D004107 1.8e-48 196.8 212 65.1
Rhsim02G0144400 Rhododendron simsii HOM05D017760 ORTHO05D004107 9.5e-37 157.9 167 48.5
Rhsim03G0178800 Rhododendron simsii HOM05D017760 ORTHO05D004107 1.4e-32 144.1 213 44.6
Dinv05647 Davidia involucrata HOM05D009581 ORTHO05D004107 5.1e-14 82.4 111 37.8
Dinv32175 Davidia involucrata HOM05D015629 ORTHO05D004107 1.9e-13 80.5 168 32.1
Dinv14622 Davidia involucrata HOM05D015629 ORTHO05D004107 1.6e-12 77.4 123 35.0
Dinv29333 Davidia involucrata HOM05D000017 ORTHO05D000013 1.6e-12 77.4 81 40.7
Hma1.2p1_0438F.1_g153120 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.6e-12 76.3 102 36.3
Dinv14020 Davidia involucrata HOM05D009581 ORTHO05D004107 4.7e-12 75.9 152 33.6
Dinv22725 Davidia involucrata HOM05D009581 ORTHO05D004107 4.7e-12 75.9 79 43.0
Dinv39745 Davidia involucrata HOM05D009581 ORTHO05D004107 4.7e-12 75.9 153 32.0
Dinv09274 Davidia involucrata HOM05D009581 ORTHO05D004107 1.1e-11 74.7 111 36.0
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.8e-11 73.9 118 33.9
Peaxi162Scf00011g00432 Petunia axillaris HOM05D024655 ORTHO05D025895 3.1e-11 73.2 173 30.1
Rhsim02G0022000 Rhododendron simsii HOM05D009581 ORTHO05D004107 3.1e-11 73.2 116 33.6
Rhsim12G0183900 Rhododendron simsii HOM05D009581 ORTHO05D004107 3.1e-11 73.2 116 33.6
Hma1.2p1_2873F.1_g329720 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.0e-11 72.8 122 33.6
Dinv15380 Davidia involucrata HOM05D009581 ORTHO05D004107 5.2e-11 72.4 157 35.0
Hma1.2p1_0472F.1_g159930 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.8e-11 72.0 124 29.8
Rhsim13G0158600 Rhododendron simsii HOM05D009581 ORTHO05D004107 6.8e-11 72.0 153 28.8
Nitab4.5_0005309g0020 Nicotiana tabacum HOM05D024655 ORTHO05D025895 8.9e-11 71.6 99 40.4
Dinv03803 Davidia involucrata HOM05D009581 ORTHO05D004107 3.4e-10 69.7 152 30.9
Dinv41030 Davidia involucrata HOM05D009581 ORTHO05D004107 1.3e-09 67.8 153 30.7
Hma1.2p1_0542F.1_g174870 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-09 67.8 106 37.7
Hma1.2p1_0936F.1_g238946 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-09 67.8 106 37.7
Hma1.2p1_0936F.1_g238949 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-09 67.8 106 37.7
Rhsim08G0179400 Rhododendron simsii HOM05D009581 ORTHO05D004107 2.2e-09 67.0 132 34.1
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 2.9e-09 66.6 107 35.5
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 3.7e-09 66.2 107 35.5
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 3.7e-09 66.2 107 35.5
Hma1.2p1_0046F.1_g027230 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.9e-09 65.9 97 37.1
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-09 65.9 107 35.5
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-09 65.9 107 35.5
Hma1.2p1_0429F.1_g151110 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.4e-09 65.1 103 37.9
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 1.9e-08 63.9 109 35.8
Nitab4.5_0000039g0090 Nicotiana tabacum HOM05D024655 ORTHO05D025895 2.4e-08 63.5 103 36.9
Rhsim04G0146100 Rhododendron simsii HOM05D009581 ORTHO05D004107 2.4e-08 63.5 117 31.6
Dinv03120 Davidia involucrata HOM05D009581 ORTHO05D004107 5.4e-08 62.4 92 35.9
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 7.1e-08 62.0 108 35.2
Dinv22791 Davidia involucrata HOM05D000017 ORTHO05D000013 9.2e-08 61.6 93 36.6
Hma1.2p1_0192F.1_g083640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.2e-08 61.6 116 32.8
Rhsim01G0142000 Rhododendron simsii HOM05D009581 ORTHO05D004107 9.2e-08 61.6 84 34.5
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 1.6e-07 60.8 107 32.7
Rhsim12G0071700 Rhododendron simsii HOM05D017760 ORTHO05D004107 2.1e-07 60.5 153 43.1
Rhsim08G0180300 Rhododendron simsii HOM05D009581 ORTHO05D004107 2.7e-07 60.1 95 34.7
Rhsim13G0148900 Rhododendron simsii HOM05D009581 ORTHO05D004107 2.7e-07 60.1 136 33.1
Hma1.2p1_0257F.1_g103480 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.0e-07 58.9 131 31.3
Dinv11221 Davidia involucrata HOM05D000017 ORTHO05D012861 7.8e-07 58.5 93 37.6
Rhsim09G0123400 Rhododendron simsii HOM05D015982 ORTHO05D012861 1.3e-06 57.8 86 37.2
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.7e-06 57.4 108 32.4
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 2.3e-06 57.0 109 33.0
Hma1.2p1_2048F.1_g312460 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.0e-06 56.6 128 32.0
Hma1.2p1_2904F.1_g330080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.0e-06 56.6 128 32.0
Lj2A937G27 Lonicera japonica HOM05D015370 ORTHO05D021357 5.1e-06 55.8 131 28.2
Hma1.2p1_0525F.1_g172635 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.6e-06 55.5 80 35.0
Hma1.2p1_0973F.1_g242990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.6e-06 55.5 80 35.0
Rhsim01G0144900 Rhododendron simsii HOM05D015982 ORTHO05D012861 6.6e-06 55.5 86 37.2


User provided reference genes

Program Settings