Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0061900 Rhododendron simsii HOM05D027677 ORTHO05D338825 3.9e-206 721.5 426 100.0
Rhsim09G0062700 Rhododendron simsii HOM05D027677 ORTHO05D338544 3.0e-97 359.8 488 48.6
Rhsim01G0161300 Rhododendron simsii HOM05D027677 ORTHO05D339865 1.4e-83 314.3 450 47.3
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 7.2e-27 125.9 443 26.4
Rhsim10G0095200 Rhododendron simsii HOM05D027677 ORTHO05D000764 1.4e-25 121.7 71 87.3
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.7e-15 88.2 308 28.2
RhsimUnG0192900 Rhododendron simsii HOM05D017774 ORTHO05D013099 5.4e-14 83.2 360 27.2
Rhsim06G0054100 Rhododendron simsii HOM05D017774 ORTHO05D013099 1.9e-11 74.7 113 36.3
CSS0007197 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.1e-10 71.2 75 38.7
CSS0014159 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.7e-10 70.9 75 38.7
CSS0000071 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.7e-10 70.1 74 37.8
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.0e-09 68.9 214 29.9
CSS0049789 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.3e-09 67.8 71 38.0
CSS0011758 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.2e-09 66.6 69 37.7
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 6.8e-09 66.2 214 29.4
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 6.8e-09 66.2 214 29.4
TWI59G0944 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 2.6e-08 64.3 69 42.0
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 3.4e-08 63.9 214 29.0
CSS0044892 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.4e-08 63.5 69 37.7
CSS0048122 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.8e-08 62.4 65 38.5
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-07 62.0 150 30.7
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-07 62.0 168 29.2
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-07 62.0 168 29.2
CSS0038750 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.8e-07 60.8 109 30.3
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0006218 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0006283 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0018155 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0018878 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0026285 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0034950 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0040322 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0046417 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-07 60.5 109 30.3
CSS0029919 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.9e-07 60.1 109 30.3
Rhsim13G0177800 Rhododendron simsii HOM05D008484 ORTHO05D007523 6.3e-07 59.7 71 33.8
CSS0010049 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.3e-07 59.3 59 37.3
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.3e-07 59.3 109 30.3
CSS0023104 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.3e-07 59.3 109 29.4
Dinv07248 Davidia involucrata HOM05D008484 ORTHO05D007523 2.4e-06 57.8 72 36.1
Dinv07454 Davidia involucrata HOM05D008484 ORTHO05D007523 3.1e-06 57.4 105 30.5
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 3.1e-06 57.4 66 36.4
CSS0002114 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.1e-06 57.0 85 34.1
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 4.1e-06 57.0 60 43.3
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 4.1e-06 57.0 60 43.3


User provided reference genes

Program Settings