Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0037900 Rhododendron simsii HOM05D006041 ORTHO05D007473 2.8e-256 888.3 490 100.0
vmacro00556 Vaccinium macrocarpon HOM05D006041 ORTHO05D007473 3.1e-207 725.3 490 80.0
Dinv26256 Davidia involucrata HOM05D006041 ORTHO05D007473 5.1e-186 654.8 496 71.4
CSS0021041 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 6.5e-181 637.9 506 69.2
CSS0021655 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 6.5e-181 637.9 506 69.2
Haze_10912 Corylus avellana HOM05D006041 ORTHO05D007473 3.9e-170 602.1 497 66.6
Cfa015002 Carpinus fangiana HOM05D006041 ORTHO05D007473 9.7e-169 597.4 500 65.6
Haze_10913 Corylus avellana HOM05D006041 ORTHO05D007473 7.7e-166 587.8 523 63.3
TWI74G1002 Tripterygium wilfordii HOM05D006041 ORTHO05D007473 2.2e-160 569.7 512 64.5
Cc11_g08020 Coffea canephora HOM05D006041 ORTHO05D007473 6.3e-160 568.2 491 64.2
Lj6A740T67 Lonicera japonica HOM05D006041 ORTHO05D007473 3.1e-159 565.8 491 63.1
Manes.15G133200 Manihot esculenta HOM05D006041 ORTHO05D007473 9.1e-159 564.3 491 64.4
COL.COLO4_16567 Corchorus olitorius HOM05D006041 ORTHO05D007473 5.5e-156 555.1 498 62.0
Sabra08G0102300 Salix brachista HOM05D006041 ORTHO05D007473 9.4e-156 554.3 493 63.7
SalBow2G0340 Salvia bowleyana HOM05D006041 ORTHO05D007473 8.0e-155 551.2 487 62.8
MD13G1029800 Malus domestica HOM05D006041 ORTHO05D007473 3.0e-154 549.3 508 60.6
RcHm_v2.0_Chr4g0443331 Rosa chinensis HOM05D006041 ORTHO05D007473 5.2e-154 548.5 490 62.9
PGR142G4228 Punica granatum HOM05D006041 ORTHO05D007473 6.8e-154 548.1 493 63.9
MD16G1020600 Malus domestica HOM05D006041 ORTHO05D007473 1.2e-153 547.4 504 61.3
Nn4g24305 Nelumbo nucifera HOM05D006041 ORTHO05D007473 1.2e-153 547.4 492 61.6
Solyc01g005430.3 Solanum lycopersicum HOM05D006041 ORTHO05D007473 1.2e-153 547.4 486 61.1
Oeu016281.1 Olea europaea HOM05D006041 ORTHO05D007473 2.0e-153 546.6 493 59.6
AUR62003915 Chenopodium quinoa HOM05D006041 ORTHO05D007473 2.8e-152 542.7 503 60.2
CsaV3_5G028000 Cucumis sativus L. HOM05D006041 ORTHO05D007473 2.8e-152 542.7 488 61.5
Cpa.g.c27573.2 Carica papaya HOM05D006041 ORTHO05D007473 4.8e-152 542.0 491 61.5
DCAR_007323 Daucus carota HOM05D006041 ORTHO05D007473 6.3e-152 541.6 512 59.2
Thecc.02G290600 Theobroma cacao HOM05D006041 ORTHO05D007473 8.3e-152 541.2 494 63.4
Lalb_Chr05g0222281 Lupinus albus HOM05D006041 ORTHO05D007473 1.1e-151 540.8 491 61.1
MELO3C005281.2 Cucumis melo HOM05D006041 ORTHO05D007473 1.4e-151 540.4 492 60.8
Migut.E00465 Erythranthe guttata HOM05D006041 ORTHO05D007473 4.1e-151 538.9 491 61.7
FvH4_4g33820 Fragaria vesca HOM05D006041 ORTHO05D007473 9.1e-151 537.7 488 62.1
SGA_v2.0_scaffold139G35400 Striga asiatica HOM05D006041 ORTHO05D007473 2.7e-150 536.2 486 60.3
Lsat_1_v5_gn_8_45641 Lactuca sativa HOM05D006041 ORTHO05D007473 4.5e-150 535.4 490 61.2
TAR629G0174 Trochodendron aralioides HOM05D006041 ORTHO05D007473 4.5e-150 535.4 485 61.9
PGSC0003DMG400032118 Solanum tuberosum HOM05D006041 ORTHO05D007473 5.9e-150 535.0 486 60.7
MBI19_g21093_MAGBIO Magnolia biondii HOM05D006041 ORTHO05D007473 7.7e-150 534.6 489 60.3
HanXRQChr08g0212441 Helianthus annuus HOM05D006041 ORTHO05D007473 2.9e-149 532.7 495 60.8
Sopen01g001440 Solanum pennellii HOM05D006041 ORTHO05D007473 3.8e-149 532.3 486 59.9
EL10Ac6g15713 Beta vulgaris HOM05D006041 ORTHO05D007473 5.0e-149 531.9 520 58.7
FAN17G0347 Fragaria x ananassa HOM05D006041 ORTHO05D007473 1.9e-148 530.0 493 61.5
Nitab4.5_0009602g0010 Nicotiana tabacum HOM05D006041 ORTHO05D007473 2.5e-148 529.6 493 59.0
Nitab4.5_0000238g0060 Nicotiana tabacum HOM05D006041 ORTHO05D007473 4.2e-148 528.9 493 59.2
Prupe.1G331600 Prunus persica HOM05D006041 ORTHO05D007473 7.2e-148 528.1 498 59.0
Phvul.002G319700 Phaseolus vulgaris HOM05D006041 ORTHO05D007473 9.4e-148 527.7 491 59.7
VMungo0251G2799 Vigna mungo HOM05D006041 ORTHO05D007473 2.1e-147 526.6 488 60.7
MSTRG.2140 Avicennia marina HOM05D006041 ORTHO05D007473 2.7e-147 526.2 488 60.7
Glyma.08G042900 Glycine max HOM05D006041 ORTHO05D007473 3.6e-147 525.8 484 60.5
Eucgr.G02114 Eucalyptus grandis HOM05D006041 ORTHO05D007473 1.8e-146 523.5 486 60.3
Gorai.005G158800 Gossypium raimondii HOM05D006041 ORTHO05D007473 1.8e-146 523.5 490 59.2
FAN12G3784 Fragaria x ananassa HOM05D006041 ORTHO05D007473 3.0e-146 522.7 496 60.3
FAN22G1094 Fragaria x ananassa HOM05D006041 ORTHO05D007473 6.8e-146 521.5 506 60.1
Lj4g0006027 Lotus japonicus HOM05D006041 ORTHO05D007473 5.7e-145 518.5 483 60.7
TAR371G0590 Trochodendron aralioides HOM05D006041 ORTHO05D007473 1.3e-144 517.3 497 59.8
Peaxi162Scf00655g00023 Petunia axillaris HOM05D006041 ORTHO05D007473 2.8e-144 516.2 474 58.9
Gohir.A01G147900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 4.9e-144 515.4 484 57.6
Duzib268G1057 Durio zibethinus HOM05D006041 ORTHO05D007473 6.3e-144 515.0 494 61.7
Sc03g0001760 Simmondsia chinensis HOM05D006041 ORTHO05D007473 1.4e-143 513.8 506 56.5
Ciclev10015068m.g Citrus clementina HOM05D006041 ORTHO05D007473 1.2e-142 510.8 507 58.6
Glyma.05G235400 Glycine max HOM05D006041 ORTHO05D007473 1.2e-142 510.8 485 60.4
Duzib251G0740 Durio zibethinus HOM05D006041 ORTHO05D007473 1.6e-142 510.4 496 57.9
Gorai.002G173400 Gossypium raimondii HOM05D006041 ORTHO05D007473 3.5e-142 509.2 484 58.3
Medtr8g104930 Medicago truncatula HOM05D006041 ORTHO05D007473 7.7e-142 508.1 489 58.9
Dinv18641 Davidia involucrata HOM05D006041 ORTHO05D007473 2.3e-141 506.5 444 64.4
Atru.chr11.510 Acer truncatum HOM05D006041 ORTHO05D007473 5.0e-141 505.4 505 56.6
Thhalv10004151m.g Eutrema salsugineum HOM05D006041 ORTHO05D007473 6.6e-141 505.0 486 58.0
Gohir.D01G141100 Gossypium hirsutum HOM05D006041 ORTHO05D007473 8.6e-141 504.6 484 57.6
Ah.03g145700 Amaranthus hybridus HOM05D006041 ORTHO05D007473 4.2e-140 502.3 502 56.8
AT2G01650 Arabidopsis thaliana HOM05D006041 ORTHO05D007473 5.5e-140 501.9 492 58.7
Carub.0005s0060 Capsella rubella HOM05D006041 ORTHO05D007473 5.5e-140 501.9 495 57.8
Aa31LG2G8250 Aethionema arabicum HOM05D006041 ORTHO05D007473 2.1e-139 500.0 488 58.6
AL5G10750 Arabidopsis lyrata HOM05D006041 ORTHO05D007473 3.6e-139 499.2 495 57.8
CAN.G1130.10 Capsicum annuum HOM05D006041 ORTHO05D007473 4.7e-139 498.8 540 53.9
ClCG01G006460 Citrullus lanatus HOM05D006041 ORTHO05D007473 4.7e-139 498.8 492 58.3
Psat7g009240 Pisum sativum HOM05D006041 ORTHO05D007473 2.3e-138 496.5 483 57.8
Manes.17G082400 Manihot esculenta HOM05D006041 ORTHO05D007473 9.8e-137 491.1 493 58.8
CANSAT01G0691 Cannabis sativa HOM05D006041 ORTHO05D007473 1.7e-136 490.3 491 57.6
THA.LOC104805081 Tarenaya hassleriana HOM05D006041 ORTHO05D007473 1.1e-135 487.6 502 57.2
Sp2g13100 Schrenkiella parvula HOM05D006041 ORTHO05D007473 4.1e-135 485.7 490 56.5
arahy.Tifrunner.gnm1.ann1.BAL5EB Arachis hypogaea HOM05D006041 ORTHO05D007473 5.4e-135 485.3 483 57.8
BcaC06g31287 Brassica carinata HOM05D006041 ORTHO05D007473 5.4e-135 485.3 484 56.4
ECA233G3443 Erigeron canadensis HOM05D006041 ORTHO05D007473 5.4e-135 485.3 482 57.1
Ca_17289_v3 Cicer arietinum L. HOM05D006041 ORTHO05D007473 7.0e-135 485.0 485 55.1
arahy.Tifrunner.gnm1.ann1.IVEQ23 Arachis hypogaea HOM05D006041 ORTHO05D007473 3.5e-134 482.6 486 56.6
BcaC06g34139 Brassica carinata HOM05D006041 ORTHO05D007473 4.6e-134 482.3 484 56.2
BolC7t43765H Brassica oleracea HOM05D006041 ORTHO05D007473 4.6e-134 482.3 484 56.2
C07p32270 Brassica napus HOM05D006041 ORTHO05D007473 5.9e-134 481.9 484 56.2
CARHR144220 Cardamine hirsuta HOM05D006041 ORTHO05D007473 1.7e-133 480.3 484 55.2
unitig_27.g25310 Utricularia gibba HOM05D006041 ORTHO05D007473 3.9e-133 479.2 485 55.5
BraA06t27296Z Brassica rapa HOM05D006041 ORTHO05D007473 4.7e-131 472.2 483 55.1
TPR.G32714 Trifolium pratense HOM05D006041 ORTHO05D007473 6.8e-130 468.4 483 55.7
A06p44210 Brassica napus HOM05D006041 ORTHO05D007473 1.3e-128 464.2 483 54.2
Sed0015632 Sechium edule HOM05D006041 ORTHO05D007473 9.2e-127 458.0 525 51.6
ATR0753G012 Amborella trichopoda HOM05D006041 ORTHO05D007473 2.7e-126 456.4 510 52.0
CiPaw.05G190300 Carya illinoinensis HOM05D006041 ORTHO05D007473 3.9e-125 452.6 415 60.7
PSO478G4621 Papaver somniferum HOM05D006041 ORTHO05D007473 6.6e-125 451.8 494 52.0
QL03p034952 Quercus lobata HOM05D006041 ORTHO05D007473 1.5e-124 450.7 441 60.3
PSO017G0247 Papaver somniferum HOM05D006041 ORTHO05D007473 3.3e-124 449.5 493 51.5
AUR62038228 Chenopodium quinoa HOM05D006041 ORTHO05D007473 1.1e-119 434.5 484 52.9
Potri.008G133700 Populus trichocarpa HOM05D006041 ORTHO05D007473 1.7e-117 427.2 414 60.1
CDE07G0862 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 3.7e-112 409.5 494 51.8
Gohir.D02G141500 Gossypium hirsutum HOM05D006041 ORTHO05D007473 1.1e-108 397.9 414 54.8
Gohir.A03G117900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 7.3e-108 395.2 431 56.4
Aqoxy3G00037 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 1.9e-103 380.6 508 47.8
SGA_v2.0_scaffold151G36726 Striga asiatica HOM05D006041 ORTHO05D007473 2.8e-99 366.7 426 52.1
Sed0013468 Sechium edule HOM05D006041 ORTHO05D007473 5.3e-98 362.5 338 57.7
Hma1.2p1_0089F.1_g045430 Hydrangea macrophylla HOM05D006041 ORTHO05D007473 1.3e-91 341.3 327 58.4
Zm00001eb099250 Zea mays HOM05D006041 ORTHO05D007473 4.0e-90 336.3 487 44.6
Actinidia34032 Actinidia chinensis HOM05D006041 ORTHO05D007473 2.7e-86 323.6 301 64.1
SEGI_21307 Sequoiadendron giganteum HOM05D006041 ORTHO05D007473 1.9e-84 317.4 407 46.9
Zm00001eb312180 Zea mays HOM05D006041 ORTHO05D007473 2.5e-84 317.0 484 42.8
GSVIVG01011678001 Vitis vinifera HOM05D006041 ORTHO05D007473 2.5e-79 300.4 187 82.4
Oeu063578.1 Olea europaea HOM05D006041 ORTHO05D007473 1.1e-74 285.0 320 52.5
CDE06G1197 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 5.0e-72 276.2 486 39.9
SGA_v2.0_scaffold151G36757 Striga asiatica HOM05D006041 ORTHO05D007473 1.8e-66 257.7 237 60.8
HPP92_009644 Vanilla planifolia HOM05D006041 ORTHO05D007473 9.7e-60 235.3 247 53.0
Os09g0401600 Oryza sativa ssp. japonica HOM05D006041 ORTHO05D007473 8.2e-59 232.3 231 55.0
Aa31LG3G2990 Aethionema arabicum HOM05D006041 ORTHO05D007473 1.0e-56 225.3 232 54.7
CBR_g3474 Chara braunii HOM05D006041 ORTHO05D007473 2.9e-56 223.8 345 38.8
SGA_v2.0_scaffold151G36758 Striga asiatica HOM05D006041 ORTHO05D007473 1.5e-52 211.5 234 52.1
Lalb_Chr16g0387681 Lupinus albus HOM05D006041 ORTHO05D007473 2.4e-50 204.1 279 48.4
Mapoly0081s0058 Marchantia polymorpha HOM05D006041 ORTHO05D007473 1.0e-45 188.7 362 34.5
Aa31sc215G20 Aethionema arabicum HOM05D006041 ORTHO05D007473 8.8e-37 159.1 151 58.3
Actinidia25876 Actinidia chinensis HOM05D001822 ORTHO05D001744 2.4e-34 151.0 111 72.1
arahy.Tifrunner.gnm1.ann1.I8TFGP Arachis hypogaea HOM05D006041 ORTHO05D007473 2.0e-33 147.9 157 47.8
Psat7g181280 Pisum sativum HOM05D006041 ORTHO05D007473 1.8e-29 134.8 137 51.8
QL10p059701 Quercus lobata HOM05D006041 ORTHO05D007473 4.4e-28 130.2 177 51.4
CAN.G3.6 Capsicum annuum HOM05D006041 ORTHO05D007473 6.3e-27 126.3 196 40.8
SMO276G0024 Selaginella moellendorffii HOM05D006041 ORTHO05D007473 1.4e-21 108.6 94 57.4
MCO04G546 Micromonas commoda HOM05D006041 ORTHO05D007473 8.9e-21 105.9 257 31.1
Actinidia34031 Actinidia chinensis HOM05D006041 ORTHO05D007473 1.1e-15 89.0 72 66.7
Aqoxy5G03556 Aquilegia oxysepala HOM05D004631 ORTHO05D005223 3.0e-08 64.3 114 37.7
Aqoxy4G01147 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 6.6e-08 63.2 88 51.1
CANSAT64G0886 Cannabis sativa HOM05D004631 ORTHO05D005223 2.5e-07 61.2 118 35.6
Thecc.04G027600 Theobroma cacao HOM05D004631 ORTHO05D005223 3.3e-07 60.8 112 37.5
MSTRG.24067 Avicennia marina HOM05D004631 ORTHO05D005223 4.3e-07 60.5 118 34.7
CSS0005098 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 4.3e-07 60.5 115 33.9
CSS0019664 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 4.3e-07 60.5 115 33.9
RhsimUnG0241300 Rhododendron simsii HOM05D004631 ORTHO05D005223 5.6e-07 60.1 116 34.5
Ciclev10016175m.g Citrus clementina HOM05D004631 ORTHO05D005223 9.5e-07 59.3 117 33.3
Ah.11g049900 Amaranthus hybridus HOM05D000470 ORTHO05D000348 2.1e-06 58.2 113 36.3
Aa31sc37G10 Aethionema arabicum HOM05D002747 ORTHO05D003069 2.8e-06 57.8 55 47.3
Cre02.g116650 Chlamydomonas reinhardtii HOM05D034198 ORTHO05D034480 2.8e-06 57.8 77 36.4
PGSC0003DMG400020270 Solanum tuberosum HOM05D004631 ORTHO05D005223 2.8e-06 57.8 117 34.2
BcaC06g33833 Brassica carinata HOM05D004631 ORTHO05D005223 3.6e-06 57.4 193 26.9
BolC7t44152H Brassica oleracea HOM05D004631 ORTHO05D005223 3.6e-06 57.4 193 26.9
RcHm_v2.0_Chr2g0174181 Rosa chinensis HOM05D004631 ORTHO05D005223 3.6e-06 57.4 117 34.2
MD09G1017300 Malus domestica HOM05D004631 ORTHO05D005223 4.7e-06 57.0 116 32.8
GSVIVG01003278001 Vitis vinifera HOM05D002747 ORTHO05D003069 4.7e-06 57.0 56 48.2
FvH4_6g52650 Fragaria vesca HOM05D004631 ORTHO05D005223 6.2e-06 56.6 117 33.3
MD17G1018100 Malus domestica HOM05D004631 ORTHO05D005223 6.2e-06 56.6 111 33.3
Duzib147G1024 Durio zibethinus HOM05D004631 ORTHO05D005223 8.1e-06 56.2 117 34.2
Mapoly0078s0021 Marchantia polymorpha HOM05D004631 ORTHO05D005223 8.1e-06 56.2 115 34.8
Solyc02g093820.4 Solanum lycopersicum HOM05D004631 ORTHO05D005223 8.1e-06 56.2 114 34.2


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