Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 2.5e-139 498.8 259 100.0
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 3.5e-117 425.2 257 85.6
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.5e-115 419.9 259 84.9
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.5e-115 419.9 257 84.8
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 3.4e-112 408.7 258 79.5
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 6.4e-111 404.4 257 78.2
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 1.1e-110 403.7 257 82.1
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 1.4e-110 403.3 257 78.6
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.9e-110 402.9 256 78.1
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.4e-110 402.5 259 81.9
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.4e-110 402.5 257 78.2
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 4.6e-109 398.3 255 79.2
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.3e-108 396.0 257 77.0
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 5.1e-108 394.8 255 79.2
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 6.6e-108 394.4 257 76.7
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 8.6e-108 394.0 255 78.0
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.1e-107 393.7 257 77.0
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.1e-107 393.7 254 77.6
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 2.5e-107 392.5 257 78.2
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 2.5e-107 392.5 257 78.2
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 3.3e-107 392.1 254 77.6
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 3.3e-107 392.1 255 76.9
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 4.3e-107 391.7 257 78.2
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 9.5e-107 390.6 261 77.0
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 1.2e-106 390.2 257 77.8
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 3.6e-106 388.7 257 75.9
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 3.6e-106 388.7 255 76.1
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 4.7e-106 388.3 254 77.6
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 6.2e-106 387.9 257 76.3
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 1.1e-105 387.1 257 76.7
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.4e-105 386.7 257 74.7
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 1.8e-105 386.3 257 75.5
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.8e-105 386.3 257 75.5
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.8e-105 386.3 259 76.8
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 3.1e-105 385.6 252 77.4
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 3.1e-105 385.6 257 76.3
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 4.0e-105 385.2 255 75.3
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 5.2e-105 384.8 257 76.3
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 1.2e-104 383.6 257 73.5
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 1.2e-104 383.6 257 73.9
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 1.2e-104 383.6 257 75.1
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 2.6e-104 382.5 259 74.5
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 2.6e-104 382.5 257 75.1
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 3.4e-104 382.1 257 74.7
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 7.5e-104 380.9 264 72.3
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 7.5e-104 380.9 257 75.5
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.7e-103 379.8 257 75.1
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 2.2e-103 379.4 257 75.1
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 4.9e-103 378.3 256 75.8
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 4.9e-103 378.3 256 75.8
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 4.9e-103 378.3 256 73.0
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 4.9e-103 378.3 257 75.5
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 6.4e-103 377.9 257 72.4
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 6.4e-103 377.9 257 72.0
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 1.9e-102 376.3 257 72.0
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 1.9e-102 376.3 257 75.5
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.9e-102 376.3 257 74.3
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 4.1e-102 375.2 257 74.7
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 3.5e-101 372.1 257 72.0
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 3.5e-101 372.1 257 70.8
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 4.6e-101 371.7 257 71.6
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 4.6e-101 371.7 257 71.6
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 4.6e-101 371.7 257 71.6
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 6.0e-101 371.3 257 72.0
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 3.0e-100 369.0 264 71.6
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.9e-99 366.3 252 73.8
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 3.3e-99 365.5 257 74.3
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 4.3e-99 365.2 257 70.8
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 4.3e-99 365.2 257 73.2
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 7.3e-99 364.4 257 71.2
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 9.5e-99 364.0 220 87.3
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.6e-98 363.2 257 72.8
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 2.1e-98 362.8 246 74.8
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 3.6e-98 362.1 257 70.8
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 8.1e-98 360.9 259 71.8
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.1e-97 360.5 256 69.5
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 3.1e-97 359.0 257 71.6
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 2.2e-95 352.8 258 68.2
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 8.7e-92 340.9 257 67.7
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.1e-91 340.5 257 67.7
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 7.3e-91 337.8 254 66.1
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.2e-90 337.0 257 69.3
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 2.8e-90 335.9 257 66.1
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 6.9e-89 331.3 215 79.5
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.5e-88 330.1 240 72.9
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 2.6e-88 329.3 255 64.7
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.3e-87 327.0 252 68.7
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 7.1e-86 321.2 198 84.8
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 7.1e-86 321.2 225 76.4
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 1.2e-85 320.5 257 62.6
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 7.8e-85 317.8 210 73.3
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.4e-81 307.0 257 63.4
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 1.2e-80 303.9 257 61.9
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.4e-78 297.0 257 64.2
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 2.1e-77 293.1 214 72.4
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 8.1e-74 281.2 254 62.2
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 1.4e-73 280.4 206 63.6
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 4.0e-73 278.9 275 60.4
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 6.9e-65 251.5 254 51.2
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.0e-63 247.7 254 50.4
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 6.7e-60 235.0 250 49.6
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 3.7e-58 229.2 168 66.1
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 8.2e-58 228.0 258 45.7
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 6.9e-57 224.9 251 47.0
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 9.0e-57 224.6 214 59.8
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 7.9e-45 184.9 164 60.4
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 1.0e-44 184.5 174 58.0
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 1.0e-44 184.5 164 57.3
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 2.3e-44 183.3 161 59.0
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 1.1e-43 181.0 155 60.6
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 1.1e-43 181.0 131 71.8
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 1.3e-42 177.6 125 72.8
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 2.7e-37 159.8 119 70.6
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 4.4e-35 152.5 91 81.3
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 4.1e-33 146.0 243 37.9
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 1.6e-32 144.1 109 67.9
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 2.7e-29 133.3 93 65.6
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 2.0e-19 100.5 166 47.0
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 5.0e-15 85.9 83 54.2
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 2.0e-08 63.9 39 69.2
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 2.7e-08 63.5 38 92.1


User provided reference genes

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