Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0018900 Rhododendron simsii HOM05D064894 ORTHO05D000421 2.4e-139 498.8 248 100.0
Rhsim09G0018500 Rhododendron simsii HOM05D064894 ORTHO05D339545 8.7e-49 198.0 104 95.2
Rhsim11G0097900 Rhododendron simsii HOM05D000621 ORTHO05D000421 5.0e-12 75.9 106 42.5
vmacro01582 Vaccinium macrocarpon HOM05D000621 ORTHO05D000421 6.5e-12 75.5 108 42.6
Hma1.2p1_0052F.1_g030670 Hydrangea macrophylla HOM05D000621 ORTHO05D000421 8.8e-09 65.1 110 38.2
Hund07303 Selenicereus undatus HOM05D000621 ORTHO05D000421 2.6e-08 63.5 102 37.3
Lj5C325G6 Lonicera japonica HOM05D000621 ORTHO05D000421 4.4e-08 62.8 102 36.3
Actinidia35509 Actinidia chinensis HOM05D000621 ORTHO05D000421 2.2e-07 60.5 103 39.8
Oeu048871.1 Olea europaea HOM05D000621 ORTHO05D000421 4.8e-07 59.3 103 32.0
Gohir.A13G176300 Gossypium hirsutum HOM05D000621 ORTHO05D000421 6.3e-07 58.9 110 35.5
SGA_v2.0_scaffold5G02898 Striga asiatica HOM05D000621 ORTHO05D000421 6.3e-07 58.9 105 33.3
TAR633G2377 Trochodendron aralioides HOM05D000621 ORTHO05D000421 8.2e-07 58.5 101 35.6
COL.COLO4_05529 Corchorus olitorius HOM05D000621 ORTHO05D000421 1.1e-06 58.2 115 30.4
Actinidia20975 Actinidia chinensis HOM05D000621 ORTHO05D000421 1.4e-06 57.8 102 36.3
ECA233G3045 Erigeron canadensis HOM05D000621 ORTHO05D000421 1.4e-06 57.8 102 38.2
Gohir.D13G182700 Gossypium hirsutum HOM05D000621 ORTHO05D000421 1.4e-06 57.8 110 34.5
Gorai.013G208100 Gossypium raimondii HOM05D000621 ORTHO05D000421 1.4e-06 57.8 110 34.5
Lsat_1_v5_gn_6_15721 Lactuca sativa HOM05D000621 ORTHO05D000421 1.4e-06 57.8 106 34.9
COL.COLO4_07367 Corchorus olitorius HOM05D000621 ORTHO05D000421 2.4e-06 57.0 117 35.0
GSVIVG01031264001 Vitis vinifera HOM05D000621 ORTHO05D000421 3.1e-06 56.6 106 33.0
unitig_899.g15628 Utricularia gibba HOM05D000621 ORTHO05D000421 7.0e-06 55.5 79 39.2
arahy.Tifrunner.gnm1.ann1.492HD2 Arachis hypogaea HOM05D000621 ORTHO05D000421 9.1e-06 55.1 103 31.1
arahy.Tifrunner.gnm1.ann1.CG4MLB Arachis hypogaea HOM05D000621 ORTHO05D000421 9.1e-06 55.1 103 31.1
COL.COLO4_08200 Corchorus olitorius HOM05D000621 ORTHO05D000421 9.1e-06 55.1 116 33.6
Thecc.05G325400 Theobroma cacao HOM05D000621 ORTHO05D000421 9.1e-06 55.1 107 32.7


User provided reference genes

Program Settings