Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 5.6e-53 210.7 107 100.0
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 6.8e-43 177.2 98 89.8
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 7.1e-40 167.2 97 84.5
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 1.2e-39 166.4 97 81.4
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 6.6e-38 160.6 97 80.4
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 8.6e-38 160.2 97 80.4
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.1e-37 159.8 95 80.0
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 1.9e-37 159.1 96 79.2
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 5.6e-37 157.5 94 80.9
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 7.3e-37 157.1 96 79.2
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.2e-36 156.4 94 79.8
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 4.7e-36 154.5 96 77.1
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 4.7e-36 154.5 96 79.2
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 8.1e-36 153.7 94 78.7
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 8.1e-36 153.7 96 77.1
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.1e-35 153.3 97 78.4
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 1.4e-35 152.9 97 76.3
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 1.4e-35 152.9 97 78.4
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 1.4e-35 152.9 96 79.2
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 1.4e-35 152.9 93 79.6
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 2.4e-35 152.1 96 75.0
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 3.1e-35 151.8 96 76.0
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 3.1e-35 151.8 95 78.9
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 3.1e-35 151.8 95 80.0
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 4.0e-35 151.4 96 78.1
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 4.0e-35 151.4 95 78.9
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 6.9e-35 150.6 94 76.6
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 6.9e-35 150.6 95 77.9
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 9.0e-35 150.2 98 74.5
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 9.0e-35 150.2 97 74.2
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 9.0e-35 150.2 95 78.9
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 1.2e-34 149.8 95 78.9
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 1.2e-34 149.8 96 76.0
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 1.2e-34 149.8 94 76.6
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.5e-34 149.4 95 77.9
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.5e-34 149.4 95 77.9
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.5e-34 149.4 96 76.0
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 2.0e-34 149.1 96 75.0
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 2.0e-34 149.1 96 74.0
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 2.6e-34 148.7 95 76.8
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 2.6e-34 148.7 96 76.0
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 3.4e-34 148.3 95 75.8
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 3.4e-34 148.3 94 77.7
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 4.4e-34 147.9 97 75.3
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 4.4e-34 147.9 97 74.2
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 5.8e-34 147.5 97 72.2
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 5.8e-34 147.5 94 73.4
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 5.8e-34 147.5 98 74.5
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 5.8e-34 147.5 94 76.6
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 5.8e-34 147.5 96 76.0
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 5.8e-34 147.5 95 75.8
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 5.8e-34 147.5 94 76.6
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 7.6e-34 147.1 95 74.7
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 7.6e-34 147.1 97 72.2
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 7.6e-34 147.1 97 72.2
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 9.9e-34 146.7 96 75.0
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 1.7e-33 146.0 95 74.7
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 1.7e-33 146.0 96 75.0
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 2.9e-33 145.2 95 71.6
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 3.8e-33 144.8 96 72.9
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 4.9e-33 144.4 96 72.9
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 4.9e-33 144.4 96 74.0
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 8.4e-33 143.7 93 77.4
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.9e-32 142.5 94 75.5
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 3.2e-32 141.7 94 73.4
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 3.2e-32 141.7 94 73.4
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 3.2e-32 141.7 96 72.9
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 4.2e-32 141.4 95 74.7
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 4.2e-32 141.4 95 71.6
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 5.4e-32 141.0 95 72.6
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 2.7e-31 138.7 95 74.7
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 4.6e-31 137.9 93 67.7
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 6.0e-31 137.5 86 80.2
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 2.3e-30 135.6 95 68.4
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 5.1e-30 134.4 94 68.1
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 1.5e-29 132.9 95 65.3
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 1.9e-29 132.5 94 72.3
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 1.9e-29 132.5 109 62.4
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 2.5e-29 132.1 94 71.3
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 4.3e-29 131.3 100 66.0
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 9.6e-29 130.2 94 69.1
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 1.6e-28 129.4 94 70.2
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 8.1e-28 127.1 94 68.1
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 1.4e-27 126.3 95 61.1
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 1.4e-27 126.3 109 59.6
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 2.4e-27 125.6 94 67.0
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 2.4e-27 125.6 94 69.1
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 2.4e-27 125.6 94 68.1
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 2.4e-27 125.6 94 67.0
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 3.1e-27 125.2 94 69.1
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 5.3e-27 124.4 92 64.1
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 9.0e-27 123.6 95 61.1
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 2.0e-26 122.5 95 66.3
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 9.9e-26 120.2 83 72.3
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 2.4e-24 115.5 105 55.2
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 2.9e-17 92.0 92 57.6
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 2.9e-17 92.0 94 57.4


User provided reference genes

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