Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0242100 Rhododendron simsii HOM05D001276 ORTHO05D001085 1.3e-35 152.5 76 100.0
Haze_16088 Corylus avellana HOM05D001276 ORTHO05D001085 4.3e-15 84.3 70 58.6
RcHm_v2.0_Chr2g0146771 Rosa chinensis HOM05D001276 ORTHO05D001085 4.9e-11 70.9 107 42.1
Dinv20399 Davidia involucrata HOM05D001276 ORTHO05D001085 8.4e-11 70.1 112 42.0
Thecc.09G066600 Theobroma cacao HOM05D001276 ORTHO05D001085 1.1e-10 69.7 110 38.2
FAN10G0664 Fragaria x ananassa HOM05D001276 ORTHO05D001085 1.4e-10 69.3 111 39.6
Duzib168G1696 Durio zibethinus HOM05D001276 ORTHO05D001085 2.4e-10 68.6 110 37.3
FvH4_7g04450 Fragaria vesca HOM05D001276 ORTHO05D001085 2.4e-10 68.6 107 41.1
FAN06G3313 Fragaria x ananassa HOM05D001276 ORTHO05D001085 2.4e-10 68.6 107 41.1
FAN06G4055 Fragaria x ananassa HOM05D001276 ORTHO05D001085 2.4e-10 68.6 107 41.1
Prupe.3G035800 Prunus persica HOM05D001276 ORTHO05D001085 2.4e-10 68.6 107 41.1
FAN01G3041 Fragaria x ananassa HOM05D001276 ORTHO05D001085 3.2e-10 68.2 107 40.2
COL.COLO4_21170 Corchorus olitorius HOM05D001276 ORTHO05D001085 4.1e-10 67.8 110 38.2
Actinidia26008 Actinidia chinensis HOM05D001276 ORTHO05D001085 1.2e-09 66.2 107 42.1
FAN03G2420 Fragaria x ananassa HOM05D001276 ORTHO05D001085 1.2e-09 66.2 107 40.2
MD17G1150100 Malus domestica HOM05D001276 ORTHO05D001085 1.2e-09 66.2 107 40.2
Eucgr.J02611 Eucalyptus grandis HOM05D001276 ORTHO05D001085 1.6e-09 65.9 115 40.9
Dinv37841 Davidia involucrata HOM05D001276 ORTHO05D001085 2.7e-09 65.1 107 42.1
PGR102G0576 Punica granatum HOM05D001276 ORTHO05D001085 2.7e-09 65.1 113 39.8
Gohir.A06G081200 Gossypium hirsutum HOM05D001276 ORTHO05D001085 3.5e-09 64.7 110 36.4
CiPaw.02G133300 Carya illinoinensis HOM05D001276 ORTHO05D001085 4.6e-09 64.3 108 39.8
DCAR_026428 Daucus carota HOM05D001276 ORTHO05D001085 4.6e-09 64.3 57 64.9
TWI32G0332 Tripterygium wilfordii HOM05D001276 ORTHO05D001085 6.0e-09 63.9 109 37.6
Gohir.D06G080800 Gossypium hirsutum HOM05D001276 ORTHO05D001085 7.8e-09 63.5 110 35.5
Gorai.010G094200 Gossypium raimondii HOM05D001276 ORTHO05D001085 7.8e-09 63.5 110 35.5
MD09G1176700 Malus domestica HOM05D001276 ORTHO05D001085 1.0e-08 63.2 107 39.3
Lj9A536T70 Lonicera japonica HOM05D001276 ORTHO05D001085 2.3e-08 62.0 111 39.6
Cc07_g12250 Coffea canephora HOM05D001276 ORTHO05D001085 3.9e-08 61.2 107 39.3
Lj9A536T71 Lonicera japonica HOM05D001276 ORTHO05D001085 3.9e-08 61.2 111 39.6
Manes.03G055600 Manihot esculenta HOM05D001276 ORTHO05D001085 3.9e-08 61.2 109 37.6
Peaxi162Scf00431g00312 Petunia axillaris HOM05D001276 ORTHO05D001085 1.1e-07 59.7 107 39.3
Aqoxy7G00989 Aquilegia oxysepala HOM05D001276 ORTHO05D001085 1.5e-07 59.3 108 37.0
Cpa.g.sc82.20 Carica papaya HOM05D001276 ORTHO05D001085 1.5e-07 59.3 39 76.9
Potri.006G217800 Populus trichocarpa HOM05D001276 ORTHO05D001085 1.5e-07 59.3 39 76.9
Ciclev10010174m.g Citrus clementina HOM05D001276 ORTHO05D001085 1.9e-07 58.9 39 74.4
Manes.16G087900 Manihot esculenta HOM05D001276 ORTHO05D001085 1.9e-07 58.9 109 35.8
SalBow3G2070 Salvia bowleyana HOM05D001276 ORTHO05D001085 2.5e-07 58.5 39 74.4
SEGI_08479 Sequoiadendron giganteum HOM05D001276 ORTHO05D001085 3.3e-07 58.2 39 76.9
SEGI_20733 Sequoiadendron giganteum HOM05D001276 ORTHO05D001085 3.3e-07 58.2 39 76.9
ATR0681G319 Amborella trichopoda HOM05D001276 ORTHO05D001085 4.3e-07 57.8 39 74.4
ClCG09G001210 Citrullus lanatus HOM05D001276 ORTHO05D001085 5.6e-07 57.4 39 74.4
Glyma.07G042900 Glycine max HOM05D001276 ORTHO05D001085 5.6e-07 57.4 39 74.4
Lsat_1_v5_gn_4_91621 Lactuca sativa HOM05D001276 ORTHO05D001085 5.6e-07 57.4 39 74.4
Phvul.010G126500 Phaseolus vulgaris HOM05D001276 ORTHO05D001085 5.6e-07 57.4 39 74.4
VMungo0331G0272 Vigna mungo HOM05D001276 ORTHO05D001085 5.6e-07 57.4 39 74.4
Nitab4.5_0000235g0190 Nicotiana tabacum HOM05D001276 ORTHO05D001085 9.6e-07 56.6 107 38.3
CsaV3_7G034160 Cucumis sativus L. HOM05D001276 ORTHO05D001085 1.2e-06 56.2 39 71.8
ECA232G3969 Erigeron canadensis HOM05D001276 ORTHO05D001085 1.2e-06 56.2 39 74.4
MBI19_g38001_MAGBIO Magnolia biondii HOM05D001276 ORTHO05D001085 1.2e-06 56.2 39 71.8
TWI34G0596 Tripterygium wilfordii HOM05D001276 ORTHO05D001085 1.6e-06 55.8 39 71.8
Duzib187G1045 Durio zibethinus HOM05D001276 ORTHO05D001085 2.1e-06 55.5 110 31.8
Solyc02g038720.2 Solanum lycopersicum HOM05D001276 ORTHO05D001085 2.1e-06 55.5 39 71.8
PGSC0003DMG400034344 Solanum tuberosum HOM05D001276 ORTHO05D001085 2.1e-06 55.5 39 71.8
Migut.M01692 Erythranthe guttata HOM05D001276 ORTHO05D001085 2.8e-06 55.1 39 71.8
CANSAT56G1768 Cannabis sativa HOM05D001276 ORTHO05D001085 3.6e-06 54.7 39 71.8
Sed0023283 Sechium edule HOM05D001276 ORTHO05D001085 4.7e-06 54.3 39 71.8
Atru.chr7.1813 Acer truncatum HOM05D001276 ORTHO05D001085 6.2e-06 53.9 39 69.2
SalBow3G1868 Salvia bowleyana HOM05D001276 ORTHO05D001085 8.1e-06 53.5 39 66.7


User provided reference genes

Program Settings