Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0230700 Rhododendron simsii HOM05D005721 ORTHO05D006758 0.0e+00 1218.0 612 100.0
vmacro18826 Vaccinium macrocarpon HOM05D005721 ORTHO05D006758 0.0e+00 1092.4 664 84.6
Actinidia21738 Actinidia chinensis HOM05D005721 ORTHO05D006758 1.1e-281 973.0 666 75.7
CSS0018154 Camellia sinensis var. sinensis HOM05D005721 ORTHO05D006758 1.1e-281 973.0 664 75.8
Dinv37937 Davidia involucrata HOM05D005721 ORTHO05D006758 9.0e-265 916.8 664 71.1
Hma1.2p1_0388F.1_g142110 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 3.8e-263 911.4 659 69.8
Haze_15914 Corylus avellana HOM05D005721 ORTHO05D006758 8.7e-260 900.2 665 68.7
Dinv30404 Davidia involucrata HOM05D005721 ORTHO05D006758 7.4e-259 897.1 568 77.6
TAR383G0756 Trochodendron aralioides HOM05D005721 ORTHO05D006758 1.6e-258 896.0 650 70.3
QL05p015721 Quercus lobata HOM05D005721 ORTHO05D006758 4.8e-258 894.4 664 68.4
CiPaw.01G227700 Carya illinoinensis HOM05D005721 ORTHO05D006758 1.3e-255 886.3 657 68.0
QL05p015579 Quercus lobata HOM05D005721 ORTHO05D006758 1.3e-255 886.3 664 67.9
Duzib235G0012 Durio zibethinus HOM05D005721 ORTHO05D006758 1.2e-253 879.8 655 68.7
Gohir.A10G062400 Gossypium hirsutum HOM05D005721 ORTHO05D006758 2.1e-253 879.0 657 68.0
GSVIVG01016897001 Vitis vinifera HOM05D005721 ORTHO05D006758 2.7e-253 878.6 662 67.5
Thecc.06G106800 Theobroma cacao HOM05D005721 ORTHO05D006758 6.1e-253 877.5 657 68.9
Gorai.011G068100 Gossypium raimondii HOM05D005721 ORTHO05D006758 7.9e-253 877.1 657 67.9
CANSAT56G2950 Cannabis sativa HOM05D005721 ORTHO05D006758 9.7e-251 870.2 655 67.0
RcHm_v2.0_Chr2g0142311 Rosa chinensis HOM05D005721 ORTHO05D006758 2.4e-249 865.5 653 68.0
Prupe.3G053200 Prunus persica HOM05D005721 ORTHO05D006758 4.1e-249 864.8 665 66.6
MD17G1178100 Malus domestica HOM05D005721 ORTHO05D006758 7.7e-248 860.5 665 66.6
Duzib192G0301 Durio zibethinus HOM05D005721 ORTHO05D006758 2.9e-247 858.6 654 67.6
FvH4_6g32880 Fragaria vesca HOM05D005721 ORTHO05D006758 1.4e-246 856.3 655 66.7
Medtr8g015550 Medicago truncatula HOM05D005721 ORTHO05D006758 5.5e-246 854.4 655 65.0
FAN05G3306 Fragaria x ananassa HOM05D005721 ORTHO05D006758 3.6e-245 851.7 655 66.4
Lj3g0007444 Lotus japonicus HOM05D005721 ORTHO05D006758 1.4e-244 849.7 665 65.1
MD09G1196700 Malus domestica HOM05D005721 ORTHO05D006758 2.3e-244 849.0 665 66.0
Psat4g194600 Pisum sativum HOM05D005721 ORTHO05D006758 6.7e-244 847.4 655 65.0
FAN02G2457 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.1e-243 846.7 655 66.1
Eucgr.F03100 Eucalyptus grandis HOM05D005721 ORTHO05D006758 1.5e-243 846.3 661 66.6
Lalb_Chr01g0013341 Lupinus albus HOM05D005721 ORTHO05D006758 4.4e-243 844.7 660 64.7
Lsat_1_v5_gn_4_96061 Lactuca sativa HOM05D005721 ORTHO05D006758 1.7e-242 842.8 661 64.9
PGR102G0208 Punica granatum HOM05D005721 ORTHO05D006758 2.2e-242 842.4 675 65.5
Glyma.07G013000 Glycine max HOM05D005721 ORTHO05D006758 4.8e-242 841.3 659 66.0
Glyma.08G196700 Glycine max HOM05D005721 ORTHO05D006758 1.8e-241 839.3 659 65.7
Lj9A516G96 Lonicera japonica HOM05D005721 ORTHO05D006758 3.1e-241 838.6 644 66.9
Nn6g35400 Nelumbo nucifera HOM05D005721 ORTHO05D006758 2.0e-240 835.9 655 65.0
Ca_23291_v3 Cicer arietinum L. HOM05D005721 ORTHO05D006758 5.0e-239 831.2 662 63.9
Ciclev10025098m.g Citrus clementina HOM05D005721 ORTHO05D006758 2.5e-238 828.9 649 64.9
Atru.chr1.3621 Acer truncatum HOM05D005721 ORTHO05D006758 3.2e-238 828.6 650 64.2
Aqoxy7G03983 Aquilegia oxysepala HOM05D005721 ORTHO05D006758 2.1e-237 825.9 655 64.7
Sopen03g040160 Solanum pennellii HOM05D005721 ORTHO05D006758 1.4e-236 823.2 659 64.9
Solyc03g121350.3 Solanum lycopersicum HOM05D005721 ORTHO05D006758 2.3e-236 822.4 659 64.9
CsaV3_7G034930 Cucumis sativus L. HOM05D005721 ORTHO05D006758 6.7e-236 820.8 660 63.6
Nitab4.5_0004848g0040 Nicotiana tabacum HOM05D005721 ORTHO05D006758 6.7e-236 820.8 671 64.4
ECA232G2751 Erigeron canadensis HOM05D005721 ORTHO05D006758 2.6e-235 818.9 662 63.1
Hma1.2p1_0388F.1_g142120 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 4.8e-234 814.7 529 75.8
Cc04_g02230 Coffea canephora HOM05D005721 ORTHO05D006758 8.2e-234 813.9 661 63.4
Manes.11G029200 Manihot esculenta HOM05D005721 ORTHO05D006758 3.1e-233 812.0 656 62.3
CAN.G1668.6 Capsicum annuum HOM05D005721 ORTHO05D006758 4.1e-233 811.6 663 64.1
ClCG09G000510 Citrullus lanatus HOM05D005721 ORTHO05D006758 5.3e-233 811.2 640 64.8
VMungo0331G1465 Vigna mungo HOM05D005721 ORTHO05D006758 9.1e-233 810.4 657 63.3
Sed0006169 Sechium edule HOM05D005721 ORTHO05D006758 5.9e-232 807.7 658 62.9
PSO210G3246 Papaver somniferum HOM05D005721 ORTHO05D006758 4.2e-230 801.6 663 63.7
Phvul.010G142500 Phaseolus vulgaris HOM05D005721 ORTHO05D006758 8.0e-229 797.3 651 63.0
Gohir.D10G064100 Gossypium hirsutum HOM05D005721 ORTHO05D006758 1.4e-228 796.6 585 69.1
PSO210G5250 Papaver somniferum HOM05D005721 ORTHO05D006758 1.5e-227 793.1 653 63.7
Nn8g38942 Nelumbo nucifera HOM05D005721 ORTHO05D006758 5.7e-227 791.2 656 62.3
Hund07658 Selenicereus undatus HOM05D005721 ORTHO05D006758 9.8e-227 790.4 652 62.7
TPR.G8754 Trifolium pratense HOM05D005721 ORTHO05D006758 1.7e-226 789.6 563 69.1
Nitab4.5_0006071g0030 Nicotiana tabacum HOM05D005721 ORTHO05D006758 2.2e-226 789.3 668 63.3
Sc12g0009950 Simmondsia chinensis HOM05D005721 ORTHO05D006758 1.5e-222 776.5 562 67.1
Migut.I00999 Erythranthe guttata HOM05D005721 ORTHO05D006758 2.5e-222 775.8 670 61.5
THA.LOC104813944 Tarenaya hassleriana HOM05D005721 ORTHO05D006758 2.7e-221 772.3 656 61.3
MBI01_g16575_MAGBIO Magnolia biondii HOM05D005721 ORTHO05D006758 6.1e-221 771.2 656 62.7
Peaxi162Scf00038g01247 Petunia axillaris HOM05D005721 ORTHO05D006758 1.2e-219 766.9 665 61.4
SGA_v2.0_scaffold71G23752 Striga asiatica HOM05D005721 ORTHO05D006758 1.3e-218 763.5 668 59.9
A07p39040 Brassica napus HOM05D005721 ORTHO05D006758 9.2e-217 757.3 651 59.4
C06p47250 Brassica napus HOM05D005721 ORTHO05D006758 9.2e-217 757.3 651 59.4
BolC6t39764H Brassica oleracea HOM05D005721 ORTHO05D006758 9.2e-217 757.3 651 59.4
Thhalv10018233m.g Eutrema salsugineum HOM05D005721 ORTHO05D006758 2.9e-215 752.3 651 59.4
CARHR065990 Cardamine hirsuta HOM05D005721 ORTHO05D006758 1.9e-214 749.6 651 59.0
BraA07t31454Z Brassica rapa HOM05D005721 ORTHO05D006758 3.3e-214 748.8 662 58.5
Sp5g27980 Schrenkiella parvula HOM05D005721 ORTHO05D006758 1.6e-213 746.5 651 59.1
AT1G73020 Arabidopsis thaliana HOM05D005721 ORTHO05D006758 2.1e-213 746.1 651 59.0
Carub.0002s1978 Capsella rubella HOM05D005721 ORTHO05D006758 2.1e-213 746.1 651 58.8
AL2G32770 Arabidopsis lyrata HOM05D005721 ORTHO05D006758 1.4e-212 743.4 651 58.8
arahy.Tifrunner.gnm1.ann1.NQY1Y2 Arachis hypogaea HOM05D005721 ORTHO05D006758 1.8e-209 733.0 654 58.1
arahy.Tifrunner.gnm1.ann1.HT12QJ Arachis hypogaea HOM05D005721 ORTHO05D006758 7.0e-209 731.1 654 57.8
Aa31LG4G3310 Aethionema arabicum HOM05D005721 ORTHO05D006758 1.6e-208 729.9 648 59.0
Os01g0706700 Oryza sativa ssp. japonica HOM05D005721 ORTHO05D006758 4.3e-206 721.8 658 59.4
Oeu001923.1 Olea europaea HOM05D005721 ORTHO05D006758 1.0e-204 717.2 656 59.1
BraA07t30638Z Brassica rapa HOM05D005721 ORTHO05D006758 4.0e-204 715.3 647 57.7
BolC6t38551H Brassica oleracea HOM05D005721 ORTHO05D006758 7.5e-203 711.1 660 56.5
EL10Ac9g21136 Beta vulgaris HOM05D005721 ORTHO05D006758 1.3e-202 710.3 687 56.8
ATR0789G086 Amborella trichopoda HOM05D005721 ORTHO05D006758 1.9e-201 706.4 654 59.2
BcaC08g45678 Brassica carinata HOM05D005721 ORTHO05D006758 2.7e-200 702.6 649 56.9
A07p30000 Brassica napus HOM05D005721 ORTHO05D006758 2.8e-197 692.6 650 56.5
C06p34410 Brassica napus HOM05D005721 ORTHO05D006758 6.2e-197 691.4 649 56.1
DCAR_031423 Daucus carota HOM05D005721 ORTHO05D006758 1.5e-182 643.7 654 54.7
AUR62023905 Chenopodium quinoa HOM05D005721 ORTHO05D006758 5.2e-180 635.2 589 58.1
AUR62038341 Chenopodium quinoa HOM05D005721 ORTHO05D006758 3.2e-177 625.9 646 54.0
Zm00001eb361150 Zea mays HOM05D005721 ORTHO05D006758 1.7e-175 620.2 506 63.8
Cpa.g.sc131.22 Carica papaya HOM05D005721 ORTHO05D006758 5.1e-175 618.6 620 56.0
Oeu026535.1 Olea europaea HOM05D005721 ORTHO05D006758 5.1e-175 618.6 447 69.1
Zm00001eb155350 Zea mays HOM05D005721 ORTHO05D006758 1.2e-171 607.4 503 63.0
MELO3C024406.2 Cucumis melo HOM05D005721 ORTHO05D006758 1.4e-169 600.5 580 55.5
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 3.2e-169 599.4 572 56.1
Ah.01g004440 Amaranthus hybridus HOM05D005721 ORTHO05D006758 1.4e-161 573.9 660 51.5
Actinidia32127 Actinidia chinensis HOM05D005721 ORTHO05D006758 3.0e-159 566.2 657 51.8
AagrBONN_evm.TU.Sc2ySwM_344.674 Anthoceros agrestis HOM05D005721 ORTHO05D006758 7.4e-134 481.9 584 44.9
Mapoly0004s0214 Marchantia polymorpha HOM05D005721 ORTHO05D006758 2.2e-133 480.3 588 44.9
SMO147G0374 Selaginella moellendorffii HOM05D005721 ORTHO05D006758 1.6e-128 464.2 543 44.4
Pp3c7_22640 Physcomitrium patens HOM05D005721 ORTHO05D006758 8.2e-125 451.8 579 43.7
CBR_g57226 Chara braunii HOM05D005721 ORTHO05D006758 2.0e-107 394.0 553 39.2
arahy.Tifrunner.gnm1.ann1.NL3M0M Arachis hypogaea HOM05D005721 ORTHO05D006758 9.5e-89 332.0 337 54.0
FAN14G1222 Fragaria x ananassa HOM05D005721 ORTHO05D006758 3.7e-85 320.1 231 67.1
FvH4_6g32370 Fragaria vesca HOM05D005721 ORTHO05D006758 2.3e-50 204.5 151 66.2
Gorai.010G178600 Gossypium raimondii HOM05D005721 ORTHO05D006758 7.6e-46 189.5 156 62.2
arahy.Tifrunner.gnm1.ann1.402B9T Arachis hypogaea HOM05D005721 ORTHO05D006758 9.3e-44 182.6 354 33.9
QL05p015216 Quercus lobata HOM05D005721 ORTHO05D006758 1.5e-41 175.3 160 57.5
arahy.Tifrunner.gnm1.ann1.P3QXG2 Arachis hypogaea HOM05D005721 ORTHO05D006758 4.8e-40 170.2 203 47.8
VMungo0251G0043 Vigna mungo HOM05D005721 ORTHO05D006758 1.2e-38 165.6 131 60.3
Gohir.D06G152751 Gossypium hirsutum HOM05D005721 ORTHO05D006758 1.7e-37 161.8 155 54.8
Gohir.A06G146950 Gossypium hirsutum HOM05D005721 ORTHO05D006758 6.5e-37 159.8 155 54.8
SEGI_20658 Sequoiadendron giganteum HOM05D005721 ORTHO05D006758 4.6e-35 153.7 228 36.0
Oeu023783.1 Olea europaea HOM05D005721 ORTHO05D006758 1.8e-34 151.8 268 38.1
HanXRQChr05g0162621 Helianthus annuus HOM05D005721 ORTHO05D006758 2.2e-29 134.8 83 78.3
HanXRQChr04g0123091 Helianthus annuus HOM05D005721 ORTHO05D006758 2.1e-27 128.3 80 77.5
Glyma.09G112900 Glycine max HOM05D005721 ORTHO05D006758 8.8e-26 122.9 101 58.4
COL.COLO4_30597 Corchorus olitorius HOM05D005721 ORTHO05D006758 1.6e-19 102.1 83 62.7
Glyma.16G086100 Glycine max HOM05D005721 ORTHO05D006758 8.8e-18 96.3 54 81.5
Glyma.16G136400 Glycine max HOM05D005721 ORTHO05D006758 9.7e-17 92.8 54 79.6
Glyma.19G071451 Glycine max HOM05D005721 ORTHO05D006758 2.2e-16 91.7 60 71.7
Cfa026500 Carpinus fangiana HOM05D005721 ORTHO05D006758 8.2e-16 89.7 473 22.6
Zm00001eb344360 Zea mays HOM05D005721 ORTHO05D006758 2.6e-14 84.7 138 39.9
Zm00001eb192810 Zea mays HOM05D005721 ORTHO05D006758 2.9e-13 81.3 54 77.8
MCO06G118 Micromonas commoda HOM05D005721 ORTHO05D006758 7.2e-12 76.6 226 28.3
Zm00001eb419420 Zea mays HOM05D005721 ORTHO05D006758 1.7e-08 65.5 38 81.6
HanXRQChr09g0276291 Helianthus annuus HOM05D005721 ORTHO05D006758 5.9e-06 57.0 31 80.6


User provided reference genes

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