Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0221700 Rhododendron simsii HOM05D007609 ORTHO05D009539 2.8e-41 171.4 79 100.0
vmacro18908 Vaccinium macrocarpon HOM05D007609 ORTHO05D009539 1.5e-26 122.5 88 65.9
Hma1.2p1_0092F.1_g046650 Hydrangea macrophylla HOM05D007609 ORTHO05D009539 1.3e-17 92.8 86 57.0
Dinv38045 Davidia involucrata HOM05D007609 ORTHO05D009539 1.3e-14 82.8 75 56.0
TAR383G0714 Trochodendron aralioides HOM05D007609 ORTHO05D009539 8.4e-14 80.1 54 63.0
Manes.03G019500 Manihot esculenta HOM05D007609 ORTHO05D009539 1.4e-13 79.3 80 52.5
Cpa.g.sc451.1 Carica papaya HOM05D007609 ORTHO05D009539 1.6e-12 75.9 62 59.7
Hma1.2p1_0018F.1_g013450 Hydrangea macrophylla HOM05D007609 ORTHO05D009539 1.3e-11 72.8 38 73.7
Sabra18G0066900 Salix brachista HOM05D007609 ORTHO05D009539 2.3e-11 72.0 70 51.4
CSS0012617 Camellia sinensis var. sinensis HOM05D007609 ORTHO05D009539 3.9e-11 71.2 38 71.1
Gohir.A07G006801 Gossypium hirsutum HOM05D007609 ORTHO05D009539 6.7e-11 70.5 50 58.0
Thecc.09G111700 Theobroma cacao HOM05D007609 ORTHO05D009539 8.7e-11 70.1 64 51.6
Gorai.001G004700 Gossypium raimondii HOM05D007609 ORTHO05D009539 1.1e-10 69.7 46 58.7
Gohir.D07G005100 Gossypium hirsutum HOM05D007609 ORTHO05D009539 1.5e-10 69.3 46 58.7
Peaxi162Scf00207g00095 Petunia axillaris HOM05D007609 ORTHO05D009539 1.5e-10 69.3 77 45.5
PGSC0003DMG400016536 Solanum tuberosum HOM05D007609 ORTHO05D009539 2.5e-10 68.6 60 50.0
Manes.16G116800 Manihot esculenta HOM05D007609 ORTHO05D009539 3.3e-10 68.2 40 65.0
Haze_25706 Corylus avellana HOM05D007609 ORTHO05D009539 4.3e-10 67.8 59 54.2
Potri.018G078900 Populus trichocarpa HOM05D007609 ORTHO05D009539 4.3e-10 67.8 47 61.7
Solyc06g066700.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 4.3e-10 67.8 73 45.2
PGSC0003DMG400005604 Solanum tuberosum HOM05D007609 ORTHO05D009539 5.6e-10 67.4 78 46.2
Ciclev10010038m.g Citrus clementina HOM05D007609 ORTHO05D009539 7.4e-10 67.0 59 52.5
Gohir.A06G061700 Gossypium hirsutum HOM05D007609 ORTHO05D009539 9.6e-10 66.6 38 68.4
Gohir.D08G261700 Gossypium hirsutum HOM05D007609 ORTHO05D009539 9.6e-10 66.6 46 56.5
Gorai.004G279800 Gossypium raimondii HOM05D007609 ORTHO05D009539 9.6e-10 66.6 46 56.5
Gorai.010G069800 Gossypium raimondii HOM05D007609 ORTHO05D009539 9.6e-10 66.6 43 62.8
HanXRQChr10g0317871 Helianthus annuus HOM05D007609 ORTHO05D009539 9.6e-10 66.6 44 63.6
Sopen03g039030 Solanum pennellii HOM05D007609 ORTHO05D009539 9.6e-10 66.6 80 45.0
AUR62016446 Chenopodium quinoa HOM05D007609 ORTHO05D009539 2.1e-09 65.5 85 43.5
Gohir.A08G241000 Gossypium hirsutum HOM05D007609 ORTHO05D009539 2.1e-09 65.5 46 54.3
Gohir.D06G060000 Gossypium hirsutum HOM05D007609 ORTHO05D009539 2.1e-09 65.5 39 66.7
Nitab4.5_0000351g0200 Nicotiana tabacum HOM05D007609 ORTHO05D009539 2.1e-09 65.5 46 58.7
Peaxi162Scf00015g00416 Petunia axillaris HOM05D007609 ORTHO05D009539 2.1e-09 65.5 72 45.8
Potri.006G159300 Populus trichocarpa HOM05D007609 ORTHO05D009539 2.8e-09 65.1 64 46.9
Sopen06g024990 Solanum pennellii HOM05D007609 ORTHO05D009539 2.8e-09 65.1 73 43.8
Atru.chr7.1339 Acer truncatum HOM05D007609 ORTHO05D009539 3.7e-09 64.7 51 58.8
Solyc03g120155.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 3.7e-09 64.7 44 61.4
Sopen03g039040 Solanum pennellii HOM05D007609 ORTHO05D009539 3.7e-09 64.7 70 45.7
QL10p054851 Quercus lobata HOM05D007609 ORTHO05D009539 4.8e-09 64.3 48 58.3
AUR62011005 Chenopodium quinoa HOM05D007609 ORTHO05D009539 6.2e-09 63.9 67 49.3
unitig_899.g14776 Utricularia gibba HOM05D007609 ORTHO05D009539 6.2e-09 63.9 73 42.5
Nitab4.5_0005851g0050 Nicotiana tabacum HOM05D007609 ORTHO05D009539 1.1e-08 63.2 79 46.8
Solyc03g120160.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 1.1e-08 63.2 72 45.8
DCAR_028717 Daucus carota HOM05D007609 ORTHO05D009539 1.4e-08 62.8 30 70.0
QL05p023464 Quercus lobata HOM05D007609 ORTHO05D009539 1.4e-08 62.8 48 56.2
AUR62021516 Chenopodium quinoa HOM05D007609 ORTHO05D009539 1.8e-08 62.4 67 49.3
Lsat_1_v5_gn_4_103641 Lactuca sativa HOM05D007609 ORTHO05D009539 1.8e-08 62.4 31 74.2
Nn2g11764 Nelumbo nucifera HOM05D007609 ORTHO05D009539 1.8e-08 62.4 32 65.6
TPR.G35275 Trifolium pratense HOM05D007609 ORTHO05D009539 1.8e-08 62.4 37 62.2
Sc18g0001160 Simmondsia chinensis HOM05D007609 ORTHO05D009539 2.4e-08 62.0 33 72.7
PGSC0003DMG400005605 Solanum tuberosum HOM05D007609 ORTHO05D009539 5.3e-08 60.8 80 45.0
Nn8g39210 Nelumbo nucifera HOM05D007609 ORTHO05D009539 6.9e-08 60.5 46 58.7
Nitab4.5_0003351g0110 Nicotiana tabacum HOM05D007609 ORTHO05D009539 6.9e-08 60.5 46 54.3
Prupe.7G229700 Prunus persica HOM05D007609 ORTHO05D009539 6.9e-08 60.5 30 73.3
Aqoxy7G01699 Aquilegia oxysepala HOM05D007609 ORTHO05D009539 1.2e-07 59.7 40 60.0
Cfa003264 Carpinus fangiana HOM05D007609 ORTHO05D009539 1.2e-07 59.7 35 71.4
Migut.D01028 Erythranthe guttata HOM05D007609 ORTHO05D009539 1.5e-07 59.3 32 68.8
FAN28G0995 Fragaria x ananassa HOM05D007609 ORTHO05D009539 1.5e-07 59.3 33 72.7
A08p02170 Brassica napus HOM05D010933 ORTHO05D013136 2.0e-07 58.9 30 70.0
C03p90620 Brassica napus HOM05D010933 ORTHO05D013136 2.0e-07 58.9 30 70.0
BolC3t21384H Brassica oleracea HOM05D010933 ORTHO05D013136 2.0e-07 58.9 30 70.0
COL.COLO4_34908 Corchorus olitorius HOM05D007609 ORTHO05D009539 2.0e-07 58.9 33 63.6
Medtr8g083460 Medicago truncatula HOM05D007609 ORTHO05D009539 2.6e-07 58.5 66 43.9
DCAR_023052 Daucus carota HOM05D007609 ORTHO05D009539 3.4e-07 58.2 77 39.0
FvH4_1g05030 Fragaria vesca HOM05D007609 ORTHO05D009539 3.4e-07 58.2 33 69.7
FAN26G1953 Fragaria x ananassa HOM05D007609 ORTHO05D009539 3.4e-07 58.2 33 69.7
FAN26G2876 Fragaria x ananassa HOM05D007609 ORTHO05D009539 3.4e-07 58.2 33 69.7
Lj2g0010717 Lotus japonicus HOM05D007609 ORTHO05D009539 3.4e-07 58.2 51 52.9
RcHm_v2.0_Chr2g0090641 Rosa chinensis HOM05D007609 ORTHO05D009539 3.4e-07 58.2 33 69.7
MELO3C024233.2 Cucumis melo HOM05D010933 ORTHO05D013136 4.5e-07 57.8 83 39.8
Eucgr.C03849 Eucalyptus grandis HOM05D007609 ORTHO05D009539 4.5e-07 57.8 69 39.1
FAN23G1574 Fragaria x ananassa HOM05D007609 ORTHO05D009539 4.5e-07 57.8 33 69.7
Sp1g38930 Schrenkiella parvula HOM05D010933 ORTHO05D013136 4.5e-07 57.8 32 62.5
TAR626G0143 Trochodendron aralioides HOM05D007609 ORTHO05D025968 4.5e-07 57.8 50 52.0
Lj4g0003308 Lotus japonicus HOM05D007609 ORTHO05D009539 5.8e-07 57.4 53 52.8
Peaxi162Scf00560g00120 Petunia axillaris HOM05D007609 ORTHO05D009539 5.8e-07 57.4 51 52.9
Phvul.004G162600 Phaseolus vulgaris HOM05D007609 ORTHO05D009539 7.6e-07 57.0 43 53.5
AL1G60560 Arabidopsis lyrata HOM05D010933 ORTHO05D013136 9.9e-07 56.6 48 47.9
ECA232G3029 Erigeron canadensis HOM05D007609 ORTHO05D009539 9.9e-07 56.6 86 38.4
Lsat_1_v5_gn_5_101501 Lactuca sativa HOM05D007609 ORTHO05D009539 9.9e-07 56.6 46 54.3
Lalb_Chr22g0352851 Lupinus albus HOM05D007609 ORTHO05D009539 9.9e-07 56.6 40 62.5
Glyma.07G087100 Glycine max HOM05D007609 ORTHO05D009539 1.3e-06 56.2 36 63.9
Sed0016972 Sechium edule HOM05D007609 ORTHO05D009539 1.3e-06 56.2 40 57.5
ATR0559G294 Amborella trichopoda HOM05D007609 ORTHO05D009539 1.7e-06 55.8 26 73.1
BcaC01g01321 Brassica carinata HOM05D010933 ORTHO05D013136 1.7e-06 55.8 30 66.7
BcaC01g01322 Brassica carinata HOM05D010933 ORTHO05D013136 1.7e-06 55.8 30 66.7
BraA08t32264Z Brassica rapa HOM05D010933 ORTHO05D013136 1.7e-06 55.8 30 66.7
Glyma.09G189800 Glycine max HOM05D007609 ORTHO05D009539 1.7e-06 55.8 33 63.6
C06p13920 Brassica napus HOM05D010933 ORTHO05D013136 2.2e-06 55.5 35 57.1
VMungo0464G1934 Vigna mungo HOM05D007609 ORTHO05D009539 2.2e-06 55.5 33 60.6
Ah.14g081870 Amaranthus hybridus HOM05D007609 ORTHO05D009539 2.9e-06 55.1 32 68.8
Medtr6g086445 Medicago truncatula HOM05D007609 ORTHO05D009539 2.9e-06 55.1 26 73.1
BcaB04g17155 Brassica carinata HOM05D010933 ORTHO05D013136 3.8e-06 54.7 36 58.3
Ca_25525_v3 Cicer arietinum L. HOM05D007609 ORTHO05D009539 3.8e-06 54.7 41 53.7
CiPaw.01G239000 Carya illinoinensis HOM05D007609 ORTHO05D009539 4.9e-06 54.3 62 45.2
CsaV3_7G033200 Cucumis sativus L. HOM05D010933 ORTHO05D013136 4.9e-06 54.3 73 39.7
Lalb_Chr05g0222821 Lupinus albus HOM05D007609 ORTHO05D009539 8.4e-06 53.5 37 56.8


User provided reference genes

Program Settings