Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 4.1e-176 621.3 319 100.0
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 5.6e-149 531.2 327 86.5
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.2e-143 513.5 323 83.9
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 7.5e-138 494.2 328 81.4
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 1.0e-134 483.8 332 78.0
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 4.7e-132 474.9 329 77.2
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 1.4e-131 473.4 329 77.2
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 1.4e-131 473.4 328 77.1
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 5.2e-131 471.5 327 76.5
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 8.9e-131 470.7 329 76.6
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.3e-129 466.8 328 75.0
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 4.9e-129 464.9 331 75.8
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 8.3e-129 464.2 329 74.8
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 3.2e-128 462.2 329 74.5
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 4.1e-128 461.8 338 74.3
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 5.4e-128 461.5 333 73.0
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 5.4e-128 461.5 335 72.5
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 7.1e-128 461.1 329 73.9
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 9.2e-128 460.7 330 75.2
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 1.2e-127 460.3 325 74.5
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 4.6e-127 458.4 323 74.3
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 4.6e-127 458.4 326 73.9
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 7.8e-127 457.6 329 74.8
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.3e-126 456.8 323 75.9
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 2.3e-126 456.1 329 74.2
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 2.3e-126 456.1 332 74.4
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 3.0e-126 455.7 335 73.7
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 3.9e-126 455.3 323 73.7
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 6.6e-126 454.5 333 74.2
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.5e-125 453.4 320 74.1
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 2.5e-125 452.6 333 73.9
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 7.3e-125 451.1 317 73.2
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 7.3e-125 451.1 333 73.6
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 9.6e-125 450.7 320 73.4
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 9.6e-125 450.7 325 73.8
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 2.8e-124 449.1 324 75.0
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.6e-124 448.7 326 72.4
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 3.6e-124 448.7 276 80.8
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 1.1e-123 447.2 323 72.4
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 1.8e-123 446.4 326 74.8
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 5.2e-123 444.9 333 73.6
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 5.2e-123 444.9 326 73.6
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 8.9e-123 444.1 329 72.6
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 1.3e-121 440.3 327 73.1
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 2.9e-121 439.1 315 72.4
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 2.9e-121 439.1 326 72.1
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 3.8e-121 438.7 326 72.1
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 3.8e-121 438.7 332 71.4
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 8.4e-121 437.6 320 73.8
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 1.9e-120 436.4 312 73.4
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.9e-120 436.4 332 70.5
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 3.2e-120 435.6 321 72.9
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 4.2e-120 435.3 316 72.8
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 1.6e-119 433.3 332 69.9
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 3.5e-119 432.2 328 70.7
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 7.8e-119 431.0 332 69.3
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 1.7e-118 429.9 330 71.2
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 5.1e-118 428.3 295 75.3
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 1.1e-117 427.2 311 71.1
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 1.5e-117 426.8 311 71.4
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.5e-117 426.8 319 70.8
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 5.6e-117 424.9 320 72.5
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 7.3e-117 424.5 320 72.5
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 1.6e-116 423.3 333 69.4
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 3.6e-116 422.2 311 70.7
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.4e-115 420.2 311 69.8
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 2.4e-115 419.5 325 69.2
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 3.1e-115 419.1 327 67.6
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 3.1e-115 419.1 274 76.3
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 5.3e-115 418.3 311 70.1
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 6.9e-115 417.9 274 76.3
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 9.0e-115 417.5 274 75.9
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 9.0e-115 417.5 274 75.9
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 9.0e-115 417.5 274 75.9
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 1.2e-114 417.2 311 70.1
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 2.6e-114 416.0 311 69.1
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 4.4e-114 415.2 311 69.8
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 9.9e-114 414.1 311 69.5
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 9.9e-114 414.1 311 69.5
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 7.1e-112 407.9 319 68.0
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 6.0e-111 404.8 260 77.7
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 6.0e-111 404.8 320 67.8
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 1.0e-110 404.1 311 69.1
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 1.7e-110 403.3 336 67.9
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 3.0e-110 402.5 313 70.3
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 6.6e-110 401.4 326 66.9
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 5.6e-109 398.3 328 65.9
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 5.6e-109 398.3 328 65.9
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 9.6e-109 397.5 233 84.1
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.6e-108 396.7 233 83.3
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 2.2e-105 386.3 327 64.8
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 3.2e-104 382.5 292 69.2
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 5.4e-104 381.7 234 78.6
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.6e-103 380.2 324 65.7
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 2.3e-102 376.3 304 66.1
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 3.9e-102 375.6 310 65.8
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 1.5e-101 373.6 274 69.3
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 3.7e-100 369.0 242 76.0
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 2.2e-97 359.8 286 65.4
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 1.9e-93 346.7 292 61.3
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 3.3e-93 345.9 277 65.0
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 2.1e-92 343.2 211 80.6
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 3.7e-92 342.4 303 60.1
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 1.9e-88 330.1 281 59.4
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 1.0e-86 324.3 279 63.8
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 5.7e-85 318.5 322 56.5
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 1.8e-83 313.5 270 57.0
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 2.0e-77 293.5 283 57.2
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 4.5e-66 255.8 230 63.5
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 8.0e-63 245.0 310 50.6
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.0e-61 240.4 269 52.4
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 9.1e-59 231.5 231 55.8
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 6.1e-55 218.8 199 63.3
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 1.6e-47 194.1 149 69.8
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 8.9e-38 161.8 103 69.9
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 3.4e-21 106.7 67 74.6
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 1.3e-17 94.7 81 61.7
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 4.3e-08 63.2 64 59.4
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 4.3e-08 63.2 130 41.5
Ca_29372_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 4.0e-06 56.6 132 29.5


User provided reference genes

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