Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0165200 Rhododendron simsii HOM05D011829 ORTHO05D011279 9.1e-159 564.3 489 100.0
Rhsim13G0019400 Rhododendron simsii HOM05D011829 ORTHO05D011279 1.6e-91 340.9 481 74.8
Rhsim08G0166000 Rhododendron simsii HOM05D011829 ORTHO05D011279 2.5e-76 290.4 143 94.4
Rhsim13G0019500 Rhododendron simsii HOM05D011829 ORTHO05D011279 1.8e-66 257.7 476 57.8
Rhsim13G0019800 Rhododendron simsii HOM05D011829 ORTHO05D011279 2.5e-55 220.7 486 64.4
Rhsim13G0019900 Rhododendron simsii HOM05D011829 ORTHO05D011279 1.2e-54 218.4 453 57.0
Rhsim13G0019700 Rhododendron simsii HOM05D011829 ORTHO05D011279 1.3e-48 198.4 243 47.7
vmacro05380 Vaccinium macrocarpon HOM05D011829 ORTHO05D011279 7.7e-33 146.0 246 38.6
Rhsim08G0166100 Rhododendron simsii HOM05D011829 ORTHO05D011279 1.4e-29 135.2 247 93.5
Rhsim13G0019600 Rhododendron simsii HOM05D011829 ORTHO05D011279 1.5e-28 131.7 154 48.1
vmacro02526 Vaccinium macrocarpon HOM05D000005 ORTHO05D011279 1.5e-23 115.2 83 71.1
Actinidia00712 Actinidia chinensis HOM05D000005 ORTHO05D000012 3.5e-17 94.0 70 68.6
Rhsim01G0104100 Rhododendron simsii HOM05D010378 ORTHO05D011279 5.6e-15 86.7 59 69.5
vmacro02527 Vaccinium macrocarpon HOM05D011829 ORTHO05D011279 1.6e-14 85.1 76 60.5
RhsimUnG0238200 Rhododendron simsii HOM05D010378 ORTHO05D011279 2.1e-14 84.7 59 67.8
Rhsim08G0165300 Rhododendron simsii HOM05D000005 ORTHO05D000012 3.6e-14 84.0 48 81.2
Rhsim13G0020000 Rhododendron simsii HOM05D011829 ORTHO05D011279 1.0e-13 82.4 83 54.2
Rhsim01G0099900 Rhododendron simsii HOM05D010378 ORTHO05D011279 1.8e-13 81.6 59 64.4
Rhsim01G0101900 Rhododendron simsii HOM05D010378 ORTHO05D011279 1.5e-12 78.6 75 56.0
Nn8g41080 Nelumbo nucifera HOM05D000005 ORTHO05D000012 3.4e-12 77.4 135 36.3
Rhsim13G0019300 Rhododendron simsii HOM05D011829 ORTHO05D011279 2.2e-11 74.7 134 38.8
CSS0039504 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.9e-11 74.3 75 56.0
Potri.007G099700 Populus trichocarpa HOM05D000005 ORTHO05D000012 3.7e-11 73.9 139 32.4
Rhsim01G0104500 Rhododendron simsii HOM05D010378 ORTHO05D011279 4.9e-11 73.6 59 59.3
QL09p019666 Quercus lobata HOM05D000005 ORTHO05D000012 3.2e-10 70.9 257 24.5
Rhsim01G0096000 Rhododendron simsii HOM05D010378 ORTHO05D011279 5.4e-10 70.1 51 64.7
Rhsim04G0017200 Rhododendron simsii HOM05D010378 ORTHO05D011279 1.6e-09 68.6 48 68.8
Nn8g40948 Nelumbo nucifera HOM05D000005 ORTHO05D000012 2.7e-09 67.8 133 33.8
QL12p039308 Quercus lobata HOM05D020723 ORTHO05D022460 5.9e-09 66.6 247 25.1
QL11p010296 Quercus lobata HOM05D000005 ORTHO05D000012 7.8e-09 66.2 261 23.8
QL09p052750 Quercus lobata HOM05D000005 ORTHO05D000012 1.3e-08 65.5 253 26.1
Rhsim01G0099300 Rhododendron simsii HOM05D010378 ORTHO05D011279 1.7e-08 65.1 45 68.9
QL11p010312 Quercus lobata HOM05D000005 ORTHO05D000012 2.3e-08 64.7 263 22.4
Rhsim01G0098900 Rhododendron simsii HOM05D010378 ORTHO05D011279 2.3e-08 64.7 46 65.2
Dinv27194 Davidia involucrata HOM05D009617 ORTHO05D010313 3.0e-08 64.3 139 28.8
QL93p2002_0022 Quercus lobata HOM05D000005 ORTHO05D000012 3.0e-08 64.3 248 23.8
QL05p008421 Quercus lobata HOM05D000005 ORTHO05D000012 6.6e-08 63.2 265 23.8
QL11p010027 Quercus lobata HOM05D000005 ORTHO05D000012 6.6e-08 63.2 261 23.4
Nn8g40999 Nelumbo nucifera HOM05D000005 ORTHO05D000012 1.1e-07 62.4 140 29.3
QL11p010050 Quercus lobata HOM05D000005 ORTHO05D000012 1.1e-07 62.4 262 23.3
TWI36G1442 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 1.1e-07 62.4 242 25.2
QL12p023329 Quercus lobata HOM05D000005 ORTHO05D000012 1.5e-07 62.0 147 29.9
Nn3g20282 Nelumbo nucifera HOM05D000005 ORTHO05D000012 2.5e-07 61.2 139 27.3
QL10p029742 Quercus lobata HOM05D000005 ORTHO05D000012 4.3e-07 60.5 258 24.8
Manes.12G149700 Manihot esculenta HOM05D000005 ORTHO05D000012 5.6e-07 60.1 138 28.3
QL01p010504 Quercus lobata HOM05D000005 ORTHO05D000012 5.6e-07 60.1 254 26.0
CSS0036678 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 7.3e-07 59.7 87 46.0
Dinv20734 Davidia involucrata HOM05D000005 ORTHO05D000012 9.5e-07 59.3 84 45.2
MD07G1079400 Malus domestica HOM05D000005 ORTHO05D000012 1.2e-06 58.9 141 29.1
Dinv25475 Davidia involucrata HOM05D000005 ORTHO05D000012 1.6e-06 58.5 75 46.7
CSS0016030 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.1e-06 58.2 137 29.9
Dinv17761 Davidia involucrata HOM05D000005 ORTHO05D000012 2.1e-06 58.2 137 29.9
Rhsim02G0137000 Rhododendron simsii HOM05D010378 ORTHO05D011279 2.1e-06 58.2 145 31.7
Dinv01986 Davidia involucrata HOM05D000005 ORTHO05D000012 2.8e-06 57.8 84 44.0
Dinv09673 Davidia involucrata HOM05D009617 ORTHO05D010313 2.8e-06 57.8 140 24.3
Ciclev10024507m.g Citrus clementina HOM05D000005 ORTHO05D000012 3.6e-06 57.4 162 27.2
Rhsim01G0095800 Rhododendron simsii HOM05D010378 ORTHO05D011279 3.6e-06 57.4 43 60.5
Rhsim02G0137300 Rhododendron simsii HOM05D010378 ORTHO05D011279 3.6e-06 57.4 42 64.3
CiPaw.13G072500 Carya illinoinensis HOM05D000005 ORTHO05D000012 4.7e-06 57.0 153 28.1
QL05p008400 Quercus lobata HOM05D000005 ORTHO05D000012 4.7e-06 57.0 263 22.8
TPR.G2464 Trifolium pratense HOM05D000005 ORTHO05D000012 6.2e-06 56.6 62 53.2


User provided reference genes

Program Settings