Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 2.2e-238 828.6 425 100.0
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 8.4e-161 570.9 361 79.2
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 3.4e-154 548.9 355 77.5
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 1.0e-153 547.4 361 76.7
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 1.3e-148 530.4 358 72.9
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 3.7e-148 528.9 360 72.8
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 3.7e-148 528.9 354 73.2
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 4.8e-148 528.5 365 73.2
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 6.3e-148 528.1 372 73.1
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 3.1e-147 525.8 376 73.9
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 9.1e-147 524.2 363 74.7
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 1.5e-146 523.5 366 74.3
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 2.6e-146 522.7 373 72.4
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 3.2e-144 515.8 367 71.9
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 4.2e-144 515.4 371 70.9
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 1.6e-143 513.5 357 70.6
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 3.6e-143 512.3 362 72.9
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 6.1e-143 511.5 376 69.9
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 4.4e-141 505.4 374 70.6
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 5.7e-141 505.0 361 70.6
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 7.4e-141 504.6 364 73.1
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 7.4e-141 504.6 373 70.0
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 1.7e-140 503.4 374 69.5
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 2.2e-140 503.1 370 70.5
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 2.8e-140 502.7 381 69.6
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 1.1e-139 500.7 404 65.6
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 1.1e-139 500.7 365 71.5
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 1.4e-139 500.4 378 68.3
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 1.8e-139 500.0 364 71.4
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 2.4e-139 499.6 366 69.7
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 5.3e-139 498.4 353 70.3
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 2.6e-138 496.1 378 67.7
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 4.5e-138 495.4 350 72.9
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 7.7e-138 494.6 375 68.5
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 7.7e-138 494.6 374 69.0
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 1.3e-137 493.8 364 69.5
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 2.2e-137 493.0 375 68.3
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 1.4e-136 490.3 354 67.5
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 2.1e-135 486.5 361 69.8
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 2.7e-135 486.1 371 67.9
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 4.7e-135 485.3 376 66.0
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.5e-133 480.3 365 67.1
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 2.0e-133 479.9 368 66.6
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 2.0e-133 479.9 366 68.6
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 4.4e-133 478.8 352 69.6
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 9.7e-133 477.6 357 68.3
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 2.2e-132 476.5 366 69.1
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 2.2e-132 476.5 371 68.5
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 2.8e-132 476.1 379 67.0
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 3.7e-132 475.7 361 68.1
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 6.3e-132 474.9 375 68.3
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 6.3e-132 474.9 367 67.6
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 8.2e-132 474.6 375 66.7
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 8.2e-132 474.6 379 66.5
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 1.1e-131 474.2 358 68.2
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 1.1e-131 474.2 382 64.7
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 4.1e-131 472.2 365 66.8
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 2.0e-130 469.9 378 66.7
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 2.0e-130 469.9 382 68.1
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 3.5e-130 469.2 359 66.6
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 1.7e-129 466.8 359 66.6
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 3.2e-128 462.6 368 64.7
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 5.5e-128 461.8 397 63.2
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 4.0e-126 455.7 395 63.0
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 1.5e-125 453.8 363 66.4
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 2.6e-125 453.0 353 68.0
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 3.3e-125 452.6 371 65.8
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 9.7e-125 451.1 361 66.5
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 2.8e-124 449.5 361 64.8
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 4.8e-124 448.7 363 65.8
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 6.3e-124 448.4 395 61.0
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 6.3e-124 448.4 322 72.0
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 1.4e-123 447.2 395 61.5
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 1.4e-123 447.2 395 61.5
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 1.8e-123 446.8 364 66.2
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 2.4e-123 446.4 372 65.1
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 9.1e-123 444.5 340 68.8
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 1.6e-122 443.7 395 62.0
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 2.7e-122 443.0 366 63.4
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 2.2e-121 439.9 395 60.3
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 2.2e-121 439.9 395 60.3
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 2.2e-121 439.9 356 64.3
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 2.9e-121 439.5 366 65.6
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 3.8e-121 439.1 340 67.9
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 5.0e-121 438.7 363 64.2
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 4.2e-120 435.6 386 60.9
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 8.8e-118 427.9 379 59.9
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 1.3e-116 424.1 363 60.3
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 1.3e-116 424.1 439 55.8
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 4.8e-116 422.2 330 67.0
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 5.4e-115 418.7 337 65.0
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 1.2e-114 417.5 332 66.0
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 5.9e-114 415.2 270 78.9
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 5.9e-114 415.2 336 64.6
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 2.9e-113 412.9 341 63.3
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 4.2e-112 409.1 337 64.4
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 9.5e-112 407.9 333 66.7
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 5.2e-110 402.1 354 60.2
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 5.7e-109 398.7 249 81.1
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 1.4e-107 394.0 353 59.2
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 7.0e-107 391.7 311 66.6
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 9.5e-96 354.8 379 54.4
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 3.2e-83 313.2 298 55.4
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 3.1e-78 296.6 315 52.4
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 2.2e-76 290.4 361 45.2
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 1.1e-75 288.1 361 44.6
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 1.1e-75 288.1 361 44.6
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 1.8e-70 270.8 380 43.9
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 2.7e-66 256.9 158 81.6
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 2.2e-36 157.5 382 31.4
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 4.2e-35 153.3 96 78.1
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 3.3e-32 143.7 325 33.2
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 8.5e-28 129.0 87 71.3
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 9.7e-24 115.5 105 54.3
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 8.2e-23 112.5 90 60.0
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 1.7e-20 104.8 62 87.1
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 2.7e-18 97.4 167 37.7
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 6.7e-17 92.8 141 39.0
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 4.1e-14 83.6 159 41.5
Haze_07334 Corylus avellana HOM05D006541 ORTHO05D008471 2.6e-13 80.9 52 73.1
MELO3C035773.2 Cucumis melo HOM05D006541 ORTHO05D008471 5.9e-13 79.7 50 72.0
CsaV3_1G005410 Cucumis sativus L. HOM05D006541 ORTHO05D008471 5.9e-13 79.7 50 72.0
FAN14G0637 Fragaria x ananassa HOM05D006541 ORTHO05D008471 2.7e-10 70.9 90 48.9
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 4.0e-09 67.0 45 66.7
Cfa027053 Carpinus fangiana HOM05D006541 ORTHO05D124901 8.3e-07 59.3 334 26.0


User provided reference genes

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